ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2024-12-24 21:38:07 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions

gnu: Add r-biocsingular.

Browse source 
* gnu/packages/bioconductor.scm (r-biocsingular): New variable.
This commit is contained in:
Ricardo Wurmus 2019-05-05 23:13:50 +02:00
parent 72032c9d5f
commit 993912905d
No known key found for this signature in database
GPG key ID: 197A5888235FACAC
1 changed files with 32 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

32
gnu/packages/bioconductor.scm
View file

@ -1742,6 +1742,38 @@ (define-public r-biocneighbors
achieved for all methods using the BiocParallel framework.")
(license license:gpl3)))
(define-public r-biocsingular
(package
(name "r-biocsingular")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "BiocSingular" version))
(sha256
(base32
"129z6bkdhm5wlvrjiwrr8yl2jj9chh4i6dm6firlj4c4ql3jp4f5"))))
(properties `((upstream-name . "BiocSingular")))
(build-system r-build-system)
(propagated-inputs
`(("r-beachmat" ,r-beachmat)
("r-biocgenerics" ,r-biocgenerics)
("r-biocparallel" ,r-biocparallel)
("r-delayedarray" ,r-delayedarray)
("r-irlba" ,r-irlba)
("r-matrix" ,r-matrix)
("r-rcpp" ,r-rcpp)
("r-rsvd" ,r-rsvd)
("r-s4vectors" ,r-s4vectors)))
(home-page "https://github.com/LTLA/BiocSingular")
(synopsis "Singular value decomposition for Bioconductor packages")
(description
"This package implements exact and approximate methods for singular value
decomposition and principal components analysis, in a framework that allows
them to be easily switched within Bioconductor packages or workflows. Where
possible, parallelization is achieved using the BiocParallel framework.")
(license license:gpl3)))
(define-public r-destiny
(package
(name "r-destiny")