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gnu: Add r-biocsingular.
* gnu/packages/bioconductor.scm (r-biocsingular): New variable.
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@ -1742,6 +1742,38 @@ (define-public r-biocneighbors
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achieved for all methods using the BiocParallel framework.")
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achieved for all methods using the BiocParallel framework.")
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(license license:gpl3)))
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(license license:gpl3)))
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(define-public r-biocsingular
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(package
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(name "r-biocsingular")
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(version "1.0.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "BiocSingular" version))
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(sha256
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(base32
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"129z6bkdhm5wlvrjiwrr8yl2jj9chh4i6dm6firlj4c4ql3jp4f5"))))
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(properties `((upstream-name . "BiocSingular")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-beachmat" ,r-beachmat)
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("r-biocgenerics" ,r-biocgenerics)
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("r-biocparallel" ,r-biocparallel)
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("r-delayedarray" ,r-delayedarray)
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("r-irlba" ,r-irlba)
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("r-matrix" ,r-matrix)
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("r-rcpp" ,r-rcpp)
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("r-rsvd" ,r-rsvd)
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("r-s4vectors" ,r-s4vectors)))
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(home-page "https://github.com/LTLA/BiocSingular")
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(synopsis "Singular value decomposition for Bioconductor packages")
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(description
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"This package implements exact and approximate methods for singular value
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decomposition and principal components analysis, in a framework that allows
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them to be easily switched within Bioconductor packages or workflows. Where
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possible, parallelization is achieved using the BiocParallel framework.")
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(license license:gpl3)))
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(define-public r-destiny
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(define-public r-destiny
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(package
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(package
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(name "r-destiny")
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(name "r-destiny")
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