ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2024-12-24 21:38:07 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions

gnu: cutadapt: Update to 2.1.

Browse source 
* gnu/packages/bioinformatics.scm (cutadapt): Update to 2.1.
[source]: Fetch from pypi.
[native-inputs]: Add python-setuptools-scm.
This commit is contained in:
Ricardo Wurmus 2019-03-26 16:35:56 +01:00
parent 24d6498972
commit 9ac17c6242
No known key found for this signature in database
GPG key ID: 197A5888235FACAC
1 changed files with 6 additions and 8 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

14
gnu/packages/bioinformatics.scm
View file

@ -2325,23 +2325,21 @@ (define-public python-dnaio
(define-public cutadapt (define-public cutadapt
(package (package
(name "cutadapt") (name "cutadapt")
(version "1.18") (version "2.1")
(source (origin (source (origin
(method git-fetch) (method url-fetch)
(uri (git-reference (uri (pypi-uri "cutadapt" version))
(url "https://github.com/marcelm/cutadapt.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"08bbfwyc0kvcd95jf2s95xiv9s3cbsxm39ydl0qck3fw3cviwxpg")))) "1vqmsfkm6llxzmsz9wcfcvzx9a9f8iabvwik2rbyn7nc4wm25z89"))))
(build-system python-build-system) (build-system python-build-system)
(inputs (inputs
`(("python-dnaio" ,python-dnaio) `(("python-dnaio" ,python-dnaio)
("python-xopen" ,python-xopen))) ("python-xopen" ,python-xopen)))
(native-inputs (native-inputs
`(("python-cython" ,python-cython) `(("python-cython" ,python-cython)
("python-pytest" ,python-pytest))) ("python-pytest" ,python-pytest)
("python-setuptools-scm" ,python-setuptools-scm)))
(home-page "https://cutadapt.readthedocs.io/en/stable/") (home-page "https://cutadapt.readthedocs.io/en/stable/")
(synopsis "Remove adapter sequences from nucleotide sequencing reads") (synopsis "Remove adapter sequences from nucleotide sequencing reads")
(description (description