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gnu: Add r-dropletutils.
* gnu/packages/bioconductor.scm (r-dropletutils): New variable.
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@ -4897,6 +4897,50 @@ (define-public r-drimseq
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results.")
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(license license:gpl3+)))
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(define-public r-dropletutils
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(package
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(name "r-dropletutils")
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(version "1.20.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "DropletUtils" version))
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(sha256
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(base32 "09xwfb4ihpsp465vb1zbcwm6ww6qi3spn9d8p4i1gczyc0p9pf1y"))))
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(properties `((upstream-name . "DropletUtils")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-beachmat
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r-bh
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r-biocgenerics
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r-biocparallel
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r-delayedarray
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r-delayedmatrixstats
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r-dqrng
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r-edger
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r-genomicranges
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r-hdf5array
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r-iranges
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r-matrix
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r-r-utils
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r-rcpp
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r-rhdf5
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r-rhdf5lib
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r-s4vectors
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r-scuttle
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r-singlecellexperiment
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r-summarizedexperiment))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/DropletUtils")
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(synopsis "Utilities for handling single-cell droplet data")
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(description
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"This package provides a number of utility functions for handling
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single-cell RNA-seq data from droplet technologies such as 10X Genomics. This
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includes data loading from count matrices or molecule information files,
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identification of cells from empty droplets, removal of barcode-swapped
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pseudo-cells, and downsampling of the count matrix.")
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(license license:gpl3)))
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(define-public r-dss
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(package
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(name "r-dss")
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