gnu: Add r-affyplm.

* gnu/packages/bioconductor.scm (r-affyplm): New variable.
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Mădălin Ionel Patrașcu 2023-03-20 17:00:02 +01:00 committed by Ricardo Wurmus
parent 284b5eca60
commit 9f09ac6b21
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@ -2125,6 +2125,37 @@ (define-public r-affyilm
concentrations on behal of the Langmuir model.")
(license license:gpl3)))
(define-public r-affyplm
(package
(name "r-affyplm")
(version "1.74.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "affyPLM" version))
(sha256
(base32 "0f0faxjzlg0znhjfvf1490yc54npkx659jx76cddm5hk7q0blv3v"))))
(properties `((upstream-name . "affyPLM")))
(build-system r-build-system)
(inputs (list zlib))
(propagated-inputs
(list r-affy
r-biobase
r-biocgenerics
r-gcrma
r-preprocesscore
r-zlibbioc))
(home-page "https://github.com/bmbolstad/affyPLM")
(synopsis "Methods for fitting probe-level models")
(description
"The affyPLM provides a package that extends and improves the
functionality of the base affy package. For speeding up the runs, it includes
routines that make heavy use of compiled code. The central focus is on
implementation of methods for fitting probe-level models and tools using these
models. @acronym{PLM, probe-level models} based quality assessment tools are
also provided.")
(license license:gpl2+)))
(define-public r-affyrnadegradation
(package
(name "r-affyrnadegradation")