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gnu: r-genefilter: Move to (gnu packages bioconductor).

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* gnu/packages/bioinformatics.scm (r-genefilter): Move from here...
* gnu/packages/bioconductor.scm (r-genefilter): ...to here.
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zimoun 2021-03-08 18:57:54 +01:00 committed by Ricardo Wurmus
parent 323aec6ad9
commit a35ea5fed9
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2 changed files with 28 additions and 28 deletions
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28
gnu/packages/bioconductor.scm
View file

@ -1487,6 +1487,34 @@ (define-public r-annotate
microarrays.")
(license license:artistic2.0)))
(define-public r-genefilter
(package
(name "r-genefilter")
(version "1.72.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "genefilter" version))
(sha256
(base32
"1c6h3qnjvphs977qhv5vafvsb108r0q7xhaayly6qv6adqfn94rn"))))
(build-system r-build-system)
(native-inputs
`(("gfortran" ,gfortran)
("r-knitr" ,r-knitr)))
(propagated-inputs
`(("r-annotate" ,r-annotate)
("r-annotationdbi" ,r-annotationdbi)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-survival" ,r-survival)))
(home-page "https://bioconductor.org/packages/genefilter")
(synopsis "Filter genes from high-throughput experiments")
(description
"This package provides basic functions for filtering genes from
high-throughput sequencing experiments.")
(license license:artistic2.0)))
(define-public r-hpar
(package
(name "r-hpar")

28
gnu/packages/bioinformatics.scm
View file

@ -7387,34 +7387,6 @@ (define-public r-demultiplex
")
(license license:cc0))))
(define-public r-genefilter
(package
(name "r-genefilter")
(version "1.72.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "genefilter" version))
(sha256
(base32
"1c6h3qnjvphs977qhv5vafvsb108r0q7xhaayly6qv6adqfn94rn"))))
(build-system r-build-system)
(native-inputs
`(("gfortran" ,gfortran)
("r-knitr" ,r-knitr)))
(propagated-inputs
`(("r-annotate" ,r-annotate)
("r-annotationdbi" ,r-annotationdbi)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-survival" ,r-survival)))
(home-page "https://bioconductor.org/packages/genefilter")
(synopsis "Filter genes from high-throughput experiments")
(description
"This package provides basic functions for filtering genes from
high-throughput sequencing experiments.")
(license license:artistic2.0)))
(define-public r-deseq2
(package
(name "r-deseq2")