From a66408f8c0aedce21802e73d3dddda30281e4ef6 Mon Sep 17 00:00:00 2001 From: Dave Love Date: Mon, 2 Oct 2017 21:48:45 +0100 Subject: [PATCH] gnu: Add cube. MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit * gnu/packages/profiling.scm(cube): New variable. * gnu/packages/patches/cube-nocheck.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Ludovic Courtès --- gnu/local.mk | 1 + gnu/packages/patches/cube-nocheck.patch | 16 +++ gnu/packages/profiling.scm | 139 +++++++++++++++++++++++- 3 files changed, 155 insertions(+), 1 deletion(-) create mode 100644 gnu/packages/patches/cube-nocheck.patch diff --git a/gnu/local.mk b/gnu/local.mk index d5fb935e33..6d14f2a47c 100644 --- a/gnu/local.mk +++ b/gnu/local.mk @@ -577,6 +577,7 @@ dist_patch_DATA = \ %D%/packages/patches/crda-optional-gcrypt.patch \ %D%/packages/patches/crossmap-allow-system-pysam.patch \ %D%/packages/patches/clucene-contribs-lib.patch \ + %D%/packages/patches/cube-nocheck.patch \ %D%/packages/patches/curl-bounds-check.patch \ %D%/packages/patches/cursynth-wave-rand.patch \ %D%/packages/patches/cvs-2017-12836.patch \ diff --git a/gnu/packages/patches/cube-nocheck.patch b/gnu/packages/patches/cube-nocheck.patch new file mode 100644 index 0000000000..576044e622 --- /dev/null +++ b/gnu/packages/patches/cube-nocheck.patch @@ -0,0 +1,16 @@ +Unconditionally disable network check for new versions (from Fedora). + +diff -u /home/dlove/rpmbuild/BUILD/cube-4.3.4/src/GUI-qt/display/VersionCheckWidget.cpp\~ /home/dlove/rpmbuild/BUILD/cube-4.3.4/src/GUI-qt/display/VersionCheckWidget.cpp +--- cube-4.3.4/src/GUI-qt/display/VersionCheckWidget.cpp~ 2016-04-03 00:05:37.942066948 +0100 ++++ cube-4.3.4/src/GUI-qt/display/VersionCheckWidget.cpp 2016-05-06 17:16:31.648143908 +0100 +@@ -52,7 +52,8 @@ + url = QUrl( UPDATE_CHECK_URL ); + download = NULL; + update_Available = false; +- bool no_http = env_str2bool( getenv( "CUBE_DISABLE_HTTP_DOCS" ) ); ++ // bool no_http = env_str2bool( getenv( "CUBE_DISABLE_HTTP_DOCS" ) ); ++ bool no_http = true; + if ( !no_http ) + { + updateDescription = tr( "Check for update is not performed yet." ); + diff --git a/gnu/packages/profiling.scm b/gnu/packages/profiling.scm index 9a2f2a6642..598633c3e5 100644 --- a/gnu/packages/profiling.scm +++ b/gnu/packages/profiling.scm @@ -25,13 +25,18 @@ (define-module (gnu packages profiling) #:use-module (gnu packages) #:use-module (gnu packages autotools) #:use-module (gnu packages base) ;for "which" + #:use-module (gnu packages compression) + #:use-module (gnu packages documentation) #:use-module (gnu packages fabric-management) #:use-module (gnu packages gawk) #:use-module (gnu packages gcc) + #:use-module (gnu packages glib) #:use-module (gnu packages libunwind) #:use-module (gnu packages linux) #:use-module (gnu packages ncurses) - #:use-module (gnu packages python)) + #:use-module (gnu packages perl) + #:use-module (gnu packages python) + #:use-module (gnu packages qt)) ;; Fixme: Separate out lib and fix resulting cycle errors; separate libpfm ;; output(?); build libmsr and add that component. @@ -193,3 +198,135 @@ (define-public opari2 and hybrid codes. It surrounds OpenMP directives and runtime library calls with calls to the POMP2 measurement interface.") (license license:bsd-3))) + +(define-public cube + (package + (name "cube") + (version "4.3.5") + (source + (origin + (method url-fetch) + (uri (string-append + "http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-" + version ".tar.gz")) + (sha256 (base32 "04irflia4rfw02093w9nx7rr98r640y4q8hisjywvd4b7r3nzhhx")) + (patches (search-patches "cube-nocheck.patch")))) + (inputs `(("dbus" ,dbus) + ("zlib" ,zlib))) + (native-inputs `(("perl" ,perl) + ("qtbase" ,qtbase) ; native because of qmake + ("which" ,which))) + + ;; FIXME: The doc is 14MB, but adding a doc output results in a cycle. + (outputs '("out" ;"doc" + "lib")) + + (build-system gnu-build-system) + (arguments + `(#:configure-flags + `("--enable-shared" "--disable-static" "--disable-silent-rules" + ,(string-append "LDFLAGS=-L" (assoc-ref %outputs "lib") "/lib")) + #:parallel-tests? #f + #:phases + (modify-phases %standard-phases + (add-after 'configure 'rpath + ;; Account for moving GUI stuff + (lambda* (#:key outputs #:allow-other-keys) + (let ((wl (string-append "-Wl,-rpath=" (assoc-ref outputs "out") + "/lib"))) + (substitute* "build-backend/Makefile" + (("^cube_LDFLAGS =") (string-append "cube_LDFLAGS = " wl)) + (("^libheatmap_plugin_la_LDFLAGS =") + (string-append "libheatmap_plugin_la_LDFLAGS = " wl)) + (("^libbarplot_plugin_la_LDFLAGS =") + (string-append "libbarplot_plugin_la_LDFLAGS = " wl))) + #t))) + (add-before 'install 'includes-cube + ;; It tries to install here before include exists. + (lambda* (#:key outputs #:allow-other-keys) + (let ((inc (string-append (assoc-ref outputs "lib") "/include"))) + (mkdir-p (string-append inc "/cube")) + (mkdir-p (string-append inc "/cubew")) + #t))) + (add-after 'install 'licence + (lambda* (#:key outputs #:allow-other-keys) + (let ((doc (string-append (assoc-ref outputs "lib") + "/share/doc/cube"))) + (install-file "COPYING" doc) + #t))) + ;; XXX: Commented due to cycle (see comment above.) + ;; (add-after 'install 'doc + ;; (lambda _ + ;; (let ((share (string-append (assoc-ref %outputs "doc") + ;; "/share"))) + ;; (mkdir-p share) + ;; (rename-file (string-append %output "/share/doc") + ;; (string-append share "/doc"))))) + (add-after 'install 'gui-stuff + ;; Get the Qt horror dependencies out of the lib closure + (lambda _ + (let ((outlib (string-append (assoc-ref %outputs "out") "/lib")) + (lib (string-append (assoc-ref %outputs "lib") "/lib"))) + (mkdir-p outlib) + (rename-file (string-append lib "/cube-plugins") + (string-append outlib "/cube-plugins")) + (for-each (lambda (file) + (rename-file + file (string-append outlib "/" (basename file)))) + (append (find-files lib "libgraphwidgetcommon-plugin\\..*") + (find-files lib "libcube4gui\\.so.*"))) + #t))) + (add-after 'install 'move-include + ;; Most of the headers end up under %output for some reason, + ;; despite --includedir in configure. + (lambda* (#:key outputs #:allow-other-keys) + (let ((outinc (string-append (assoc-ref outputs "out") + "/include")) + (libinc (string-append (assoc-ref outputs "lib") + "/include"))) + (for-each (lambda (file) + (let ((from (string-append outinc "/" file))) + (copy-recursively from libinc) + (delete-file-recursively from))) + '("cube" "cubew")) + #t))) + + ;; XXX: This doesn't work because cube-config, which is needed for + ;; building stuff, sources cube-config-frontend. We don't want that + ;; in the lib output because it pulls in >1GB via QT. + ;; + ;; (add-after 'install 'cube-config + ;; (lambda _ + ;; (let* ((lib (assoc-ref %outputs "lib")) + ;; (libbin (string-append lib "/bin"))) + ;; (mkdir-p libbin) + ;; (system (string-append "mv " (assoc-ref %outputs "out") + ;; "/bin/cube-config* " libbin)) + ;; (substitute* (list (string-append libbin "/cube-config")) + ;; (("^prefix=.*") (string-append "prefix=" lib)) + ;; (("^exec_prefix=\"\\$\\{prefix\\}\"") + ;; (string-append "exec_prefix=" lib)))))) + (add-after 'install 'cube-config + (lambda* (#:key outputs #:allow-other-keys) + (let* ((lib (assoc-ref outputs "lib")) + (libbin (string-append lib "/bin"))) + (mkdir-p libbin) + (install-file (string-append %output "/bin/cube-config") libbin) + (install-file (string-append %output "/bin/cube-config-backend") + libbin) + (substitute* (list (string-append libbin "/cube-config")) + (("^source .*frontend.*$") "") + (((assoc-ref outputs "out")) lib)) + #t)))))) + (home-page "http://www.scalasca.org/software/cube-4.x/download.html") + (synopsis "Performance report explorer for parallel programs") + (description + "CUBE (CUBE Uniform Behavioral Encoding) is a tool to display a variety +of performance metrics for parallel programs including MPI and OpenMP +applications. CUBE allows interactive exploration of a multidimensional +performance space in a scalable fashion. Scalability is achieved in two ways: +hierarchical decomposition of individual dimensions and aggregation across +different dimensions. All performance metrics are uniformly accommodated in +the same display and thus provide the ability to easily compare the effects of +different kinds of performance behavior.") + (license license:bsd-3)))