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gnu: express: Update to 1.5.3.
* gnu/packages/bioinformatics.scm (express): Update to 1.5.3. [source]: Fetch from Github. [arguments]: Add phase "remove-update-check".
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1 changed files with 13 additions and 7 deletions
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@ -3050,16 +3050,16 @@ (define-public exonerate
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(define-public express
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(package
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(name "express")
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(version "1.5.1")
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(version "1.5.3")
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(source (origin
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(method url-fetch)
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(uri
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(string-append
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"http://bio.math.berkeley.edu/eXpress/downloads/express-"
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version "/express-" version "-src.tgz"))
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/adarob/eXpress.git")
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(commit version)))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"03rczxd0gjp2l1jxcmjfmf5j94j77zqyxa6x063zsc585nj40n0c"))))
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"18nb22n7x820fzjngf4qgyb3mspqkw7xyk7v7s5ps6wfrd8qwscb"))))
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(build-system cmake-build-system)
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(arguments
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`(#:tests? #f ;no "check" target
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@ -3076,6 +3076,12 @@ (define-public express
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(("\\$\\{CMAKE_CURRENT_SOURCE_DIR\\}/\\.\\./bamtools/lib")
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(string-append (assoc-ref inputs "bamtools") "/lib"))
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(("libprotobuf.a") "libprotobuf.so"))
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#t))
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(add-after 'unpack 'remove-update-check
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(lambda _
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(substitute* "src/main.cpp"
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(("#include \"update_check.h\"") "")
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(("check_version\\(PACKAGE_VERSION\\);") ""))
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#t)))))
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(inputs
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`(("boost" ,boost)
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