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gnu: nanopolish: Set #:guile argument of 'wrap-script'.

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* gnu/packages/bioinformatics.scm
  (nanopolish)[arguments]<#:phases>{wrap-programs}:
  Set #:guile argument of ‘wrap-script’.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Maxime Devos 2021-05-31 19:54:49 +02:00 committed by Ludovic Courtès
parent 2d092a2afa
commit b2459387b9
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1 changed files with 5 additions and 3 deletions
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@ -13583,16 +13583,18 @@ (define-public nanopolish
(find-files "scripts" ".*")) (find-files "scripts" ".*"))
#t))) #t)))
(add-after 'install 'wrap-programs (add-after 'install 'wrap-programs
(lambda* (#:key outputs #:allow-other-keys) (lambda* (#:key inputs outputs #:allow-other-keys)
(let ((pythonpath (getenv "GUIX_PYTHONPATH")) (let ((pythonpath (getenv "GUIX_PYTHONPATH"))
(perl5lib (getenv "PERL5LIB")) (perl5lib (getenv "PERL5LIB"))
(scripts (string-append (assoc-ref outputs "out") (scripts (string-append (assoc-ref outputs "out")
"/share/nanopolish/scripts"))) "/share/nanopolish/scripts"))
(guile (search-input-file inputs "bin/guile")))
(for-each (lambda (file) (for-each (lambda (file)
(wrap-program file `("GUIX_PYTHONPATH" ":" prefix (,pythonpath)))) (wrap-program file `("GUIX_PYTHONPATH" ":" prefix (,pythonpath))))
(find-files scripts "\\.py")) (find-files scripts "\\.py"))
(for-each (lambda (file) (for-each (lambda (file)
(wrap-script file `("PERL5LIB" ":" prefix (,perl5lib)))) (wrap-script file #:guile guile
`("PERL5LIB" ":" prefix (,perl5lib))))
(find-files scripts "\\.pl")))))))) (find-files scripts "\\.pl"))))))))
(inputs (inputs
`(("guile" ,guile-3.0) ; for wrappers `(("guile" ,guile-3.0) ; for wrappers