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gnu: Add r-speaq.

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* gnu/packages/bioconductor.scm (r-speaq): New variable.
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Mădălin Ionel Patrașcu 2023-01-17 13:25:37 +01:00 committed by Ricardo Wurmus
parent a46f753051
commit b374a45eb0
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1 changed files with 41 additions and 1 deletions
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42
gnu/packages/bioconductor.scm
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@ -7,7 +7,7 @@
;;; Copyright © 2017, 2018, 2019, 2020, 2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019, 2020, 2021, 2022, 2023 Simon Tournier <zimon.toutoune@gmail.com>
;;; Copyright © 2020 Peter Lo <peterloleungyau@gmail.com>
;;; Copyright © 2020, 2021, 2022 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
;;; Copyright © 2020-2023 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
;;; Copyright © 2020 Jakub Kądziołka <kuba@kadziolka.net>
;;; Copyright © 2021 Hong Li <hli@mdc-berlin.de>
;;; Copyright © 2021 Tim Howes <timhowes@lavabit.com>
@ -7843,6 +7843,46 @@ (define-public r-slingshot
graph construction.")
(license license:artistic2.0)))
;; This is a CRAN package but it depends on a bionconductor package.
(define-public r-speaq
(package
(name "r-speaq")
(version "2.7.0")
(source (origin
(method url-fetch)
(uri (cran-uri "speaq" version))
(sha256
(base32
"0z9a3nbfazphp090c6hg892vjq7jp4g4cij3s5wbs1q567inbmlk"))))
(properties `((upstream-name . "speaq")))
(build-system r-build-system)
(propagated-inputs
(list r-cluster
r-data-table
r-dosnow
r-foreach
r-ggplot2
r-gridextra
r-impute
r-massspecwavelet
r-missforest
r-reshape2
r-rfast
r-rvest
r-xml2))
(native-inputs (list r-knitr))
(home-page "https://cran.r-project.org/package=speaq")
(synopsis "Tools for nuclear magnetic resonance spectra alignment")
(description
"This package helps with @acronym{NMR, Nuclear Magnetic Resonance} spectroscopy
data analysis as easy as possible. It only requires a small set of functions to
perform an entire analysis. Speaq offers the possibility of raw spectra alignment
and quantitation but also an analysis based on features whereby the spectra are
converted to peaks which are then grouped and turned into features. These features
can be processed with any number of statistical tools either included in speaq
or available elsewhere on CRAN.")
(license license:asl2.0)))
(define-public r-stager
(package
(name "r-stager")