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gnu: Add r-genetclassifier.

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* gnu/packages/bioconductor.scm (r-genetclassifier): New variable.
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Ricardo Wurmus 2021-09-07 12:01:25 +02:00
parent e43c6d2e4a
commit b76b47ebe4
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1 changed files with 28 additions and 0 deletions
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gnu/packages/bioconductor.scm
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@ -13910,6 +13910,34 @@ (define-public r-minet
information networks from data.")
(license license:artistic2.0)))
(define-public r-genetclassifier
(package
(name "r-genetclassifier")
(version "1.32.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "geNetClassifier" version))
(sha256
(base32
"1i1cavbbvxzqgqxfmikghnls18jrq12hb953mjrwa95lkhzdxm2d"))))
(properties
`((upstream-name . "geNetClassifier")))
(build-system r-build-system)
(propagated-inputs
`(("r-biobase" ,r-biobase)
("r-e1071" ,r-e1071)
("r-ebarrays" ,r-ebarrays)
("r-minet" ,r-minet)))
(home-page "https://www.cicancer.org")
(synopsis "Classify diseases and build gene networks using expression profiles")
(description
"This is a comprehensive package to automatically train and validate a
multi-class SVM classifier based on gene expression data. It provides
transparent selection of gene markers, their coexpression networks, and an
interface to query the classifier.")
(license license:gpl2+)))
(define-public r-tximeta
(package
(name "r-tximeta")