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Merge branch 'master' into core-updates

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Marius Bakke 2020-04-15 19:26:55 +02:00
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29
Makefile.am
View file

@ -663,11 +663,16 @@ AM_DISTCHECK_CONFIGURE_FLAGS = \
--enable-daemon \
ac_cv_guix_test_root="$(GUIX_TEST_ROOT)"
# Name of the 'guix' package shipped in the binary tarball.
GUIX_FOR_BINARY_TARBALL = guile3.0-guix
# The self-contained tarball.
guix-binary.%.tar.xz:
$(AM_V_GEN)GUIX_PACKAGE_PATH= \
tarball=`$(top_builddir)/pre-inst-env guix pack -K -C xz \
-s "$*" --localstatedir --profile-name=current-guix guix` ; \
--fallback \
-s "$*" --localstatedir --profile-name=current-guix \
$(GUIX_FOR_BINARY_TARBALL)` ; \
cp "$$tarball" "$@.tmp" ; mv "$@.tmp" "$@"
@ -701,6 +706,16 @@ gen-AUTHORS:
"$(top_srcdir)" "$(distdir)/AUTHORS"; \
fi
# Like 'dist', but regenerate 'configure' so we get an up-to-date
# 'PACKAGE_VERSION' string. (In Gnulib, 'GNUmakefile' has a special trick to
# do that whenever a 'dist' target is used.)
dist-with-updated-version:
@echo "Running './bootstrap' for new version string..."
$(top_srcdir)/bootstrap
$(MAKE) $(AM_MAKEFLAGS) $(top_srcdir)/.version dist
.PHONY: dist-with-updated-version
#
# Release management.
@ -756,7 +771,7 @@ system_flags = $(foreach system,$(1),-s $(system))
#
# XXX: Depend on 'dist' rather than 'distcheck' to work around the Gettext
# issue described at <https://savannah.gnu.org/bugs/index.php?51027>.
release: dist
release: dist-with-updated-version
cd po; git checkout .
@if ! git diff-index --quiet HEAD; then \
echo "There are uncommitted changes; stopping." >&2 ; \
@ -770,9 +785,9 @@ release: dist
"`git rev-parse HEAD`" "$(PACKAGE_VERSION)"
git add $(top_srcdir)/gnu/packages/package-management.scm
git commit -m "gnu: guix: Update to $(PACKAGE_VERSION)."
$(top_builddir)/pre-inst-env guix build guix \
$(top_builddir)/pre-inst-env guix build $(GUIX_FOR_BINARY_TARBALL) \
$(call system_flags,$(SUPPORTED_SYSTEMS)) \
-v1 --no-grafts -K
-v1 --no-grafts --fallback
rm -f $(BINARY_TARBALLS)
$(MAKE) $(BINARY_TARBALLS)
for system in $(SUPPORTED_SYSTEMS) ; do \
@ -786,12 +801,12 @@ release: dist
git commit -m "gnu: guix: Update to `git rev-parse HEAD | cut -c1-7`."
$(top_builddir)/pre-inst-env guix build guix \
$(call system_flags,$(GUIX_SYSTEM_SUPPORTED_SYSTEMS)) \
-v1 --no-grafts -K
-v1 --no-grafts --fallback
for system in $(GUIX_SYSTEM_SUPPORTED_SYSTEMS) ; do \
image=`$(top_builddir)/pre-inst-env \
guix system disk-image \
--file-system-type=iso9660 \
--system=$$system \
--system=$$system --fallback \
gnu/system/install.scm` ; \
if [ ! -f "$$image" ] ; then \
echo "failed to produced Guix installation image for $$system" >&2 ; \
@ -804,7 +819,7 @@ release: dist
for system in $(GUIX_SYSTEM_VM_SYSTEMS) ; do \
image=`$(top_builddir)/pre-inst-env \
guix system vm-image $(GUIX_SYSTEM_VM_IMAGE_FLAGS) \
--system=$$system \
--system=$$system --fallback \
gnu/system/examples/vm-image.tmpl` ; \
if [ ! -f "$$image" ] ; then \
echo "failed to produced Guix VM image for $$system" >&2 ; \

146
NEWS
View file

@ -2,7 +2,7 @@
#+TITLE: Guix NEWS – history of user-visible changes
#+STARTUP: content hidestars
Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019 Ludovic Courtès <ludo@gnu.org>
Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
Copyright © 2016, 2017, 2018 Ricardo Wurmus <rekado@elephly.net>
Copying and distribution of this file, with or without modification,
@ -11,6 +11,150 @@ Copyright © 2016, 2017, 2018 Ricardo Wurmus <rekado@elephly.net>
Please send Guix bug reports to bug-guix@gnu.org.
* Changes in 1.1.0 (since 1.0.1)
** Package management
*** New ‘guix deploy’ command to deploy several machines at once
*** Channels can now provide news, viewed with ‘guix pull --news’
*** ‘guix system reconfigure’ saves provenance data
*** New ‘guix system describe’ command to view system provenance info
*** New /run/current-system/{channels,configuration}.scm files
*** New ‘guix time-machine’ command
*** ‘guix pack’ has a new ‘--entry-point’ option
*** ‘guix pack’ saves environment variables for ‘docker’ and ‘singularity’
*** ‘guix pack’ provides a meaningful repository name for ‘docker’
*** New ‘--target’ option for ‘guix system’
*** ‘--no-build-hook’ was renamed to ‘--no-offload’
*** ‘--keep-failed’ now implies ‘--no-offload’
*** ‘--dry-run’ no longer implies ‘--no-grafts’
*** ‘guix import crate’ has a new ‘--recursive’ option
*** ‘guix import crate’ can import a specific package version
*** ‘guix pull’ returns Guix on Guile 3.0
*** ‘guix pull’ and ‘--with-git-url’ can clone repositories over SSH
*** ‘--with-commit’ now accepts tags
*** ‘guix challenge’ has a new ‘--diff’ option to show differences
*** ‘guix weather’ has a new ‘--display-missing’ option
*** Guix can now fetch lzip-compressed substitutes in addition to gzip
*** ‘guix publish’ supports lzip compression via ‘-C’
*** ‘guix lint -c archival’ queries Software Heritage
*** ‘guix archive’ has a new ‘-t’ option to list archive contents
*** ‘guix describe’ and similar commands emit terminal hyperlinks
*** ‘guix build’ now attempts to substitute missing .drv files
*** ‘guix package’ etc. now lock the profile they operate on
*** ‘guix pull’ honors /etc/guix/channels.scm when it exists
*** New ‘guix show’ command, synonymous with ‘guix package --show’
*** The ‘--manifest’ option can be repeated to combine manifests
*** Some commands previously lacking ‘--load-path’ now support it
** Distribution
*** The set of pre-built bootstrap “binary seeds” has been halved
*** Graphical installer has better support for non-Latin keyboard layouts
*** Graphical installer allows users to choose an HTTP/HTTPS proxy
*** Graphical installer allows users to edit the system configuration
*** New ‘kernel-loadable-modules’ field in ‘operating-system’
*** rottlog service is now part of ‘%base-services’
*** ‘%base-services’ now includes /usr/bin/env as a “special file”
*** ‘herd set-http-proxy guix-daemon URL’ can be used to set a proxy
*** ‘qemu-binfmt’ service now supports riscv32 and riscv64
*** File system UUIDs and labels are now supported for JFS
*** New services
auditd, fontconfig-file-system, getmail, gnome-keyring, kernel-module-loader,
knot-resolver, mumi, nfs, nftables, nix, pagekite, pam-mount, patchwork,
polkit-wheel, provenance, pulseaudio, sane, singularity, usb-modeswitch
*** 3514 new packages
*** 3368 package updates
Noteworthy updates:
bash 5.0.7, binutils 2.32, cups 2.3.1, emacs 26.3, enlightenment 0.23.1,
gcc-toolchain 9.3.0, gdb 9.1, ghc 8.6.5, gimp 2.10.18, glibc 2.29,
gnome 3.32.2, gnupg 2.2.20, go 1.13.9, guile 2.2.7,
icecat 68.7.0-guix0-preview1, icedtea 3.7.0, julia 1.3.1,
libreoffice 6.4.2.2, linux-libre 5.4.31, mate 1.24.0, ocaml 4.09.0,
octave 5.2.0, openjdk 12.33, perl 5.30.0, python2 2.7.16, python 3.7.4,
racket 7.6, rust 1.39.0, r 3.6.3, sbcl 2.0.3, shepherd 0.7.0, xfce 4.14.0,
xorg-server 1.20.7
** Programming interfaces
*** New build systems
copy-build-system, julia-build-system, node-build-system, qt-build-system
*** New ‘with-build-handler’ and ‘map/accumulate-builds’ in (guix store)
*** (guix gexp) has a new ‘with-parameters’ form
*** New (guix remote) module for remote evaluation of gexps
*** New ‘eval/container’ procedure in (gnu system linux-container)
*** (guix inferior) now reifies exceptions as ‘&inferior-exception’
*** (guix cve) uses the new NIST-provided JSON files instead of XML
*** New (guix json) module to map JSON objects to Scheme records
*** New (gnu installer tests) module to drive the graphical installer
*** New (guix diagnostics) module for consistent diagnostic messages
*** “Checkers” now live in (guix lint)
** Notewothy bug fixes
*** Grafts leads to inefficient substitute info retrieval
(<https://issues.guix.gnu.org/issue/22990>)
*** Grafting prevents build plan from being displayed upfront
(https://issues.guix.gnu.org/issue/28310)
*** Changing the HTTP/FTP proxy used by the daemon is inconvenient
(<https://issues.guix.gnu.org/issue/25569>)
*** ‘guix system disk-image’ successfully builds a bad image
(<https://issues.guix.gnu.org/issue/34276>)
*** Installer cannot be restarted after a failed install
(<https://issues.guix.gnu.org/issue/35543>)
*** Null pointer error when partitioning with the graphical installer
(<https://issues.guix.gnu.org/issue/35858>)
*** 'guix upgrade' misdiagnoses upgrades in the presence of propagated inputs
(<https://issues.guix.gnu.org/issue/35872>)
*** mcron randomly stops running jobs
(<https://issues.guix.gnu.org/issue/37237>)
*** Mistaken warning "guix pull was never run"
(<https://issues.guix.gnu.org/issue/38196>)
*** `guix pack --format=squashfs` fails on CentOS7
(<https://issues.guix.gnu.org/issue/40043>)
*** installer: No way to input Latin characters with non-Latin keyboard layouts
(<https://issues.guix.gnu.org/issue/40273>)
*** installer: Always add '%base-initrd-modules' to 'initrd-modules'
(<https://issues.guix.gnu.org/issue/36099>)
*** [MATE] shutdown and reboot not possible from UI
(<https://issues.guix.gnu.org/issue/40327>)
*** 'guix-daemon' honors %localstatedir, %sysconfdir, and %storedir
(<https://issues.guix.gnu.org/issue/35874>)
*** Fix ‘GUIX_LOCPATH’ quoting in ‘guix-daemon.service’ (systemd)
(<https://issues.guix.gnu.org/issue/36074>)
*** Include USB_ModeSwitch in %desktop-services
(<https://issues.guix.gnu.org/issue/35640>)
*** linux-container: Mount a new /dev/pts instance in the container
(<https://issues.guix.gnu.org/issue/36463>)
*** system: Write the timezone to /etc/timezone
(<https://issues.guix.gnu.org/issue/35746>)
*** linux-modules: Define and use a module name database
(<https://issues.guix.gnu.org/issue/34902>)
*** pack: Create /tmp in Docker images
(<https://issues.guix.gnu.org/issue/37161>)
*** guix system: Reinstalling the bootloader preserves extra menu entries
(<https://issues.guix.gnu.org/issue/36876>)
*** system: Add 'mount' and 'umount' to '%setuid-programs'
(<https://issues.guix.gnu.org/issue/37569>)
*** linux-libre: Try to aggressively gather entropy during boot
(<https://issues.guix.gnu.org/issue/37501>)
*** daemon: Make 'profiles/per-user' non-world-writable
(<https://issues.guix.gnu.org/issue/37744>)
*** linux-boot: Don't ignore options when mounting root file system
(<https://issues.guix.gnu.org/issue/37977>)
*** Files produced by syslogd are no longer world-readable
(<https://issues.guix.gnu.org/issue/40405>)
** Native language support
*** Updated translations of the manual
The manual is fully translated into Spanish, more than 85% complete in French
and German, and has preliminary translations into Russian and Chinese.
*** Updated translations of messages
This version of Guix is fully translated in Brazilian Portuguese, French,
German, and Spanish, and partially translated in 10 other languages.
* Changes in 1.0.1 (since 1.0.0)
** Package management
*** The ‘https_proxy’ environment variable is now honored

12
build-aux/compile-all.scm
View file

@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2016 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
;;; Copyright © 2016, 2017, 2019 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016, 2017, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@ -79,6 +79,14 @@ (define* (parallel-job-count #:optional (flags (getenv "MAKEFLAGS")))
(current-processor-count))))
(loop tail)))))))))
(define (parallel-job-count*)
;; XXX: Work around memory requirements not sustainable on i686 above '-j4'
;; or so: <https://bugs.gnu.org/40522>.
(let ((count (parallel-job-count)))
(if (string-prefix? "i686" %host-type)
(min count 4)
count)))
(define (% completed total)
"Return the completion percentage of COMPLETED over TOTAL as an integer."
(inexact->exact (round (* 100. (/ completed total)))))
@ -95,7 +103,7 @@ (define (% completed total)
(lambda ()
(compile-files srcdir (getcwd)
(filter file-needs-compilation? files)
#:workers (parallel-job-count)
#:workers (parallel-job-count*)
#:host host
#:report-load (lambda (file total completed)
(when file

5
doc/guix.texi
View file

@ -20919,7 +20919,7 @@ The time in seconds after which a process with no requests is killed.
@end deftp
@deffn {Scheme Procedure} nginx-php-fpm-location @
@deffn {Scheme Procedure} nginx-php-location @
[#:nginx-package nginx] @
[socket (string-append "/var/run/php" @
(version-major (package-version php)) @
@ -27340,7 +27340,8 @@ VM. To enable that you'll also have to pass the following flags to @command{qem
name=com.redhat.spice.0
@end example
You'll also need to add the @pxref{Miscellaneous Services, Spice service}.
You'll also need to add the @code{(spice-vdagent-service)} to your
system definition (@pxref{Miscellaneous Services, Spice service}).
@node Defining Services
@section Defining Services

14
etc/release-manifest.scm
View file

@ -23,6 +23,7 @@
(guix packages)
(guix profiles)
((gnu ci) #:select (%cross-targets))
((gnu services xorg) #:select (%default-xorg-modules))
(guix utils)
(srfi srfi-1)
(srfi srfi-26))
@ -49,7 +50,7 @@ (define %base-packages
(define %system-packages
;; Key packages proposed by the Guix System installer.
(map specification->package
(append (map specification->package
'("xorg-server" "xfce" "gnome" "mate" "enlightenment"
"openbox" "awesome" "i3-wm" "ratpoison"
"xlockmore" "slock" "libreoffice"
@ -58,7 +59,8 @@ (define %system-packages
"linux-libre" "grub-hybrid"
;; FIXME: Add IceCat when Rust is available on i686.
;;"icecat"
)))
))
%default-xorg-modules))
(define %packages-to-cross-build
;; Packages that must be cross-buildable from x86_64-linux.
@ -93,6 +95,13 @@ (define %base-manifest
%base-packages))
%hydra-supported-systems)))
(define %system-manifest
(manifest
(append-map (lambda (system)
(map (cut package->manifest-entry* <> system)
%system-packages))
'("x86_64-linux" "i686-linux")))) ;Guix System
(define %cross-manifest
(manifest
(append-map (lambda (target)
@ -115,5 +124,6 @@ (define %cross-bootstrap-manifest
;; Return the union of all three manifests.
(concatenate-manifests (list %base-manifest
%system-manifest
%cross-manifest
%cross-bootstrap-manifest))

3
gnu/installer.scm
View file

@ -118,9 +118,8 @@ (define apply-locale
;; printed on the console.
(parameterize ((shepherd-message-port
(%make-void-port "w")))
(lambda ()
(stop-service 'term-tty2)
(start-service 'term-tty2 (list locale)))))))
(start-service 'term-tty2 (list locale))))))
(define* (compute-locale-step #:key
locales-name

4
gnu/local.mk
View file

@ -943,6 +943,7 @@ dist_patch_DATA = \
%D%/packages/patches/gcc-9-strmov-store-file-names.patch \
%D%/packages/patches/gd-fix-tests-on-i686.patch \
%D%/packages/patches/gd-brect-bounds.patch \
%D%/packages/patches/gdm-default-session.patch \
%D%/packages/patches/geoclue-config.patch \
%D%/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch \
%D%/packages/patches/ghc-testsuite-dlopen-pie.patch \
@ -1179,7 +1180,6 @@ dist_patch_DATA = \
%D%/packages/patches/libvnc-CVE-2018-20750.patch \
%D%/packages/patches/libvnc-CVE-2019-15681.patch \
%D%/packages/patches/libvpx-CVE-2016-2818.patch \
%D%/packages/patches/libvpx-use-after-free-in-postproc.patch \
%D%/packages/patches/libxslt-generated-ids.patch \
%D%/packages/patches/libxt-guix-search-paths.patch \
%D%/packages/patches/lierolibre-check-unaligned-access.patch \
@ -1385,7 +1385,6 @@ dist_patch_DATA = \
%D%/packages/patches/python-pep8-stdlib-tokenize-compat.patch \
%D%/packages/patches/python-pyfakefs-remove-bad-test.patch \
%D%/packages/patches/python-flint-includes.patch \
%D%/packages/patches/python-jedi-deleted-variables.patch \
%D%/packages/patches/python-libxml2-utf8.patch \
%D%/packages/patches/python-mox3-python3.6-compat.patch \
%D%/packages/patches/python-testtools.patch \
@ -1506,7 +1505,6 @@ dist_patch_DATA = \
%D%/packages/patches/ttfautohint-source-date-epoch.patch \
%D%/packages/patches/tomb-fix-errors-on-open.patch \
%D%/packages/patches/tuxpaint-stamps-path.patch \
%D%/packages/patches/txr-shell.patch \
%D%/packages/patches/u-boot-riscv64-fix-extlinux.patch \
%D%/packages/patches/ucx-tcp-iface-ioctl.patch \
%D%/packages/patches/udiskie-no-appindicator.patch \

16
gnu/packages/bioconductor.scm
View file

@ -1958,14 +1958,14 @@ (define-public r-interactionset
(define-public r-genomicinteractions
(package
(name "r-genomicinteractions")
(version "1.20.2")
(version "1.20.3")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "GenomicInteractions" version))
(sha256
(base32
"0mqb899wah5n7bp2lajhwy2zpqqhi18plza3i3m51rfl9n62smph"))))
"01ps97cs29qvzy5piq2l2k0yyr56rmg5cycfiqhbbvqpjrfvy60g"))))
(properties
`((upstream-name . "GenomicInteractions")))
(build-system r-build-system)
@ -3332,14 +3332,14 @@ (define-public r-triform
(define-public r-varianttools
(package
(name "r-varianttools")
(version "1.28.0")
(version "1.28.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "VariantTools" version))
(sha256
(base32
"0aafcprsqbn1xl8jqnxfl8r2d0lmzhssqpr26lam2cprh3yk0xiv"))))
"1x57shc3slcbnc807ra1nwnjr37sqjh04n2xfwd469m4hkjb0jzh"))))
(properties `((upstream-name . "VariantTools")))
(build-system r-build-system)
(propagated-inputs
@ -3783,14 +3783,14 @@ (define-public r-a4reporting
(define-public r-a4base
(package
(name "r-a4base")
(version "1.34.0")
(version "1.34.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "a4Base" version))
(sha256
(base32
"0dgqyq4dnlcik5qqygnhxlhfr98sh6kmdcj2qllhrwyk0lmsfk01"))))
"1a0yk05ikk1hr1vpxynydrb5xb1hj4hdqlh9zd13n83ir89dss83"))))
(properties `((upstream-name . "a4Base")))
(build-system r-build-system)
(propagated-inputs
@ -4032,14 +4032,14 @@ (define-public r-genomicscores
(define-public r-atacseqqc
(package
(name "r-atacseqqc")
(version "1.10.3")
(version "1.10.4")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ATACseqQC" version))
(sha256
(base32
"18zf90iksglbs13cwr4jjwsv332a19lf4bpdmy69jz8bpwrklv22"))))
"1g07ni134cyl3jd9y19afip39kxddfgpm1jjm0rhrm7jgssp24in"))))
(properties `((upstream-name . "ATACseqQC")))
(build-system r-build-system)
(propagated-inputs

14
gnu/packages/bioinformatics.scm
View file

@ -7502,13 +7502,13 @@ (define-public r-bioccheck
(define-public r-s4vectors
(package
(name "r-s4vectors")
(version "0.24.3")
(version "0.24.4")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "S4Vectors" version))
(sha256
(base32
"01f7dms4kw9ajwqlvh5s47riv748xrrs41na03byhjvn4fbdc44y"))))
"1fzs8j2d3wwfzm2fq63ywf68a4dbggyl5l098f148yn4jw7jd3bc"))))
(properties
`((upstream-name . "S4Vectors")))
(build-system r-build-system)
@ -7944,13 +7944,13 @@ (define-public r-rsamtools
(define-public r-delayedarray
(package
(name "r-delayedarray")
(version "0.12.2")
(version "0.12.3")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "DelayedArray" version))
(sha256
(base32
"09lackgix5jpm16k0mz2zkibflfb4wzidbz4q32mlxmklf40037q"))))
"02i88ll2d7r83nk0wdj28akvsz3jq19g6ixpaahfy3jy5av4byv6"))))
(properties
`((upstream-name . "DelayedArray")))
(build-system r-build-system)
@ -7961,6 +7961,8 @@ (define-public r-delayedarray
("r-iranges" ,r-iranges)
("r-matrix" ,r-matrix)
("r-matrixstats" ,r-matrixstats)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/DelayedArray")
(synopsis "Delayed operations on array-like objects")
(description
@ -12769,7 +12771,7 @@ (define-public pigx-rnaseq
(define-public pigx-chipseq
(package
(name "pigx-chipseq")
(version "0.0.41")
(version "0.0.42")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_chipseq/"
@ -12777,7 +12779,7 @@ (define-public pigx-chipseq
"/pigx_chipseq-" version ".tar.gz"))
(sha256
(base32
"0akbxdmsjsq5fzbwaap04hqjpsfgv1l6yrc2pwgbya1xgqvcq6vy"))))
"0xbvgqpk32a8iczhvac56cacr46rdkqb0allhhpvmj940idf72bi"))))
(build-system gnu-build-system)
;; parts of the tests rely on access to the network
(arguments '(#:tests? #f))

4
gnu/packages/bootloaders.scm
View file

@ -443,7 +443,7 @@ (define-public dtc
(define u-boot
(package
(name "u-boot")
(version "2020.01")
(version "2020.04")
(source (origin
(method url-fetch)
(uri (string-append
@ -451,7 +451,7 @@ (define u-boot
"u-boot-" version ".tar.bz2"))
(sha256
(base32
"1w9ml4jl15q6ixpdqzspxjnl7d3rgxd7f99ms1xv5c8869h3qida"))))
"0wjkasnz87q86hx93inspdjfjsinmxi87bcvj30c773x0fpjlwzy"))))
(native-inputs
`(("bc" ,bc)
("bison" ,bison)

8
gnu/packages/cook.scm
View file

@ -1,6 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 John Darrington <jmd@gnu.org>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2020 Marius Bakke <mbakke@fastmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -60,6 +61,13 @@ (define-public cook
(substitute* "test/00/t0077a.sh"
(("ar qc") "ar qcU"))
;; Guix builds have LC_ALL set to "en_US.utf8", which causes
;; `date` to use a 12-hour clock instead of 24h, which in turn
;; makes t0217a.sh fail because of unexpected date output.
(substitute* "test/02/t0217a.sh"
(("export TZ")
"export TZ\nLC_ALL=POSIX\nexport LC_ALL"))
(setenv "SH" (which "sh"))
#t)))))
(native-inputs `(("bison" ,bison)

117
gnu/packages/cran.scm
View file

@ -1559,15 +1559,20 @@ (define-public r-colorspace
(define-public r-glue
(package
(name "r-glue")
(version "1.3.2")
(version "1.4.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "glue" version))
(sha256
(base32
"0alklqcf68kmccssp4j7a7fv553pyqyy6mkkfslav83inppm4d3g"))))
"1hb9j2519jv9zgkgjb25hnqi22i7zxnaksqd16m4nxa1f6gl0v7a"))))
(build-system r-build-system)
;; knitr depends on glue, so we can't add knitr here to build the
;; vignettes.
#;
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/tidyverse/glue")
(synopsis "Interpreted string literals")
(description
@ -1727,13 +1732,13 @@ (define-public r-pkgload
(define-public r-rcpp
(package
(name "r-rcpp")
(version "1.0.4")
(version "1.0.4.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "Rcpp" version))
(sha256
(base32 "1m80pdhzi2p82db5xkbwc2m3fzv6df59955yj03nlq40fj7zx4nr"))))
(base32 "00mk23zmrqn1c4mk9d6csjcbnl12wd7yicjk2ikmw5dyvdfngbs5"))))
(build-system r-build-system)
(home-page "http://www.rcpp.org")
(synopsis "Seamless R and C++ integration")
@ -4042,14 +4047,18 @@ (define-public r-seriation
(define-public r-xfun
(package
(name "r-xfun")
(version "0.12")
(version "0.13")
(source
(origin
(method url-fetch)
(uri (cran-uri "xfun" version))
(sha256
(base32 "0sgh8kafi9x1glmmcp1ly827pm8q7fsfngbplr41fbb4nc9363df"))))
(base32 "03iyqgx9mmdbd3qih70qzijjqcdg7k7ps5r1y6q8praanx9qvnm3"))))
(build-system r-build-system)
;; knitr itself depends on xfun
#;
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/yihui/xfun")
(synopsis "Miscellaneous functions")
(description
@ -5387,14 +5396,14 @@ (define-public r-catdap
(define-public r-arules
(package
(name "r-arules")
(version "1.6-4")
(version "1.6-5")
(source
(origin
(method url-fetch)
(uri (cran-uri "arules" version))
(sha256
(base32
"003c5cd3xzq39h7c19px077ygm0n1v7k83icy5zzrnkagyds2p8n"))))
"0bcvfn8lvcv74vv9z3kgg7yq5hm7wjqhmzadi55cbm8zxd76g84v"))))
(build-system r-build-system)
(propagated-inputs
`(("r-matrix" ,r-matrix)))
@ -6500,14 +6509,14 @@ (define-public r-sjlabelled
(define-public r-sjmisc
(package
(name "r-sjmisc")
(version "2.8.3")
(version "2.8.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "sjmisc" version))
(sha256
(base32
"0w8l9grmp4q775jrf4q6rxx36ld5daz9b0gdxyyh42xfihk6m62h"))))
"1ad7ca71w0v9ja4wb47aygczc987zz1lnjljhh2n497nzrpzzv64"))))
(build-system r-build-system)
(propagated-inputs
`(("r-dplyr" ,r-dplyr)
@ -6517,6 +6526,8 @@ (define-public r-sjmisc
("r-rlang" ,r-rlang)
("r-sjlabelled" ,r-sjlabelled)
("r-tidyselect" ,r-tidyselect)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/strengejacke/sjmisc")
(synopsis "Data and variable transformation functions")
(description
@ -7905,14 +7916,14 @@ (define-public r-magick
(define-public r-survey
(package
(name "r-survey")
(version "3.37")
(version "4.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "survey" version))
(sha256
(base32
"1f31dvh48gzzan13pdrwh84ls35x9116095i7mdrcbrhz809r8dy"))))
"1q9x0s86s72gl43zj49gypg6jj2b78xjvxr4lmy5147s9h7z8lxh"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lattice" ,r-lattice)
@ -8285,14 +8296,14 @@ (define-public r-th-data
(define-public r-multcomp
(package
(name "r-multcomp")
(version "1.4-12")
(version "1.4-13")
(source
(origin
(method url-fetch)
(uri (cran-uri "multcomp" version))
(sha256
(base32
"14c2f10rz546w7ly5f4r6wnd07yj5gic38an17gxny1vf2nsff0b"))))
"1nszi22rcc551yc75h9cdfkdqsxw1rz30vadazmpyzihp1bh63yk"))))
(build-system r-build-system)
(propagated-inputs
`(("r-codetools" ,r-codetools)
@ -8630,20 +8641,22 @@ (define-public r-ggeffects
(define-public r-effectsize
(package
(name "r-effectsize")
(version "0.2.0")
(version "0.3.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "effectsize" version))
(sha256
(base32
"1liix8rf8xq3hzi7684bl0s20iflsq6g5mxr5k59wp2qwn1i6aww"))))
"0kijp4wamkidaxysc11dd4vhvnm4wnbi87871wcbwn27k5b6i5dg"))))
(properties `((upstream-name . "effectsize")))
(build-system r-build-system)
(propagated-inputs
`(("r-bayestestr" ,r-bayestestr)
("r-insight" ,r-insight)
("r-parameters" ,r-parameters)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/easystats/effectsize")
(synopsis "Indices of effect size and standardized parameters")
(description
@ -8744,14 +8757,14 @@ (define-public r-gh
(define-public r-fs
(package
(name "r-fs")
(version "1.4.0")
(version "1.4.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "fs" version))
(sha256
(base32
"1ishdxrxy88w1lrn657a573wdra5v7xf1yfa1c4kss07rlynwrj7"))))
"0kksig9pk8aid9l6r250na8z8j9919jvs20lj0s6m9bcybgh74df"))))
(build-system r-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@ -8786,18 +8799,18 @@ (define-public r-clisymbols
(define-public r-usethis
(package
(name "r-usethis")
(version "1.5.1")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "usethis" version))
(sha256
(base32
"07an5wbikilg7cb3q6x5aykw8dfqnjrc3wpfb7gjmy0d9fh20fcy"))))
"12iyimqyza752anj29wpfisl8nz5r25kfcqbssybg24nb4wyy146"))))
(build-system r-build-system)
(propagated-inputs
`(("r-clipr" ,r-clipr)
("r-clisymbols" ,r-clisymbols)
`(("r-cli" ,r-cli)
("r-clipr" ,r-clipr)
("r-crayon" ,r-crayon)
("r-curl" ,r-curl)
("r-desc" ,r-desc)
@ -8806,6 +8819,7 @@ (define-public r-usethis
("r-git2r" ,r-git2r)
("r-glue" ,r-glue)
("r-purrr" ,r-purrr)
("r-rematch2" ,r-rematch2)
("r-rlang" ,r-rlang)
("r-rprojroot" ,r-rprojroot)
("r-rstudioapi" ,r-rstudioapi)
@ -9175,14 +9189,14 @@ (define-public r-afex
(define-public r-lmertest
(package
(name "r-lmertest")
(version "3.1-1")
(version "3.1-2")
(source
(origin
(method url-fetch)
(uri (cran-uri "lmerTest" version))
(sha256
(base32
"0r2vvs3nl6p8xla3gd943khb4ixp0alvspqpnz2y6n3wk8zgh3jj"))))
"1qkdxx5sri65zgpb9gw4nkfkdam51kgy4hxclk5c40yk7y3p0n1q"))))
(properties `((upstream-name . "lmerTest")))
(build-system r-build-system)
(propagated-inputs
@ -12067,14 +12081,14 @@ (define-public r-rarpack
(define-public r-compositions
(package
(name "r-compositions")
(version "1.40-4")
(version "1.40-5")
(source
(origin
(method url-fetch)
(uri (cran-uri "compositions" version))
(sha256
(base32
"0z40llyij3cc80ac1vzzrpykk6ysp89bn6dyyh40fbnc4anwx69a"))))
"0l9ayz2nb2wqhl7v9hkfl7pd950ba0h6hma8zqncbcxh6xh2k7l7"))))
(build-system r-build-system)
(propagated-inputs
`(("r-bayesm" ,r-bayesm)
@ -12817,14 +12831,14 @@ (define-public r-reinforcelearn
(define-public r-lemon
(package
(name "r-lemon")
(version "0.4.3")
(version "0.4.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "lemon" version))
(sha256
(base32
"0wsn5bfg10wq4dnrgpyraz2bzx9p19c7hf1pwj3h4zmpqfgsdbpw"))))
"0m9hqwi709j9iwsxn8jh63741jiyr7ppwgqaw2zkv285p3m5wvd5"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
@ -12833,6 +12847,7 @@ (define-public r-lemon
("r-knitr" ,r-knitr)
("r-lattice" ,r-lattice)
("r-plyr" ,r-plyr)
("r-rlang" ,r-rlang)
("r-scales" ,r-scales)))
(home-page "https://github.com/stefanedwards/lemon")
(synopsis "Freshen up your ggplot2 plots")
@ -13113,21 +13128,23 @@ (define-public r-units
(define-public r-classint
(package
(name "r-classint")
(version "0.4-2")
(version "0.4-3")
(source
(origin
(method url-fetch)
(uri (cran-uri "classInt" version))
(sha256
(base32
"0w980hrw8sgfdfyd5dsimalq7gwhvqm7507abk7k363pvgks23dv"))))
"1b1lqhpzxm6b8pza8l3s0cxy74mm9y45lcd3354i2v3bg8m7mply"))))
(properties `((upstream-name . "classInt")))
(build-system r-build-system)
(propagated-inputs
`(("r-class" ,r-class)
("r-e1071" ,r-e1071)
("r-kernsmooth" ,r-kernsmooth)))
(native-inputs `(("gfortran" ,gfortran)))
(native-inputs
`(("gfortran" ,gfortran)
("r-knitr" ,r-knitr)))
(home-page "https://github.com/r-spatial/classInt/")
(synopsis "Choose univariate class intervals")
(description
@ -13138,14 +13155,14 @@ (define-public r-classint
(define-public r-spdata
(package
(name "r-spdata")
(version "0.3.3")
(version "0.3.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "spData" version))
(sha256
(base32
"1v66qkvsx77hvv5c78v760yp0hknf7xzcjir2ri3ha456mz79yl5"))))
"09l9j1vjbfyc8mikb8kliqmdjkg4xigq3zhdx98mv51flh5q87lh"))))
(properties `((upstream-name . "spData")))
(build-system r-build-system)
(propagated-inputs
@ -13215,14 +13232,14 @@ (define-public r-deldir
(define-public r-sf
(package
(name "r-sf")
(version "0.9-0")
(version "0.9-1")
(source
(origin
(method url-fetch)
(uri (cran-uri "sf" version))
(sha256
(base32
"117r9l3v7nkdj9bfy6qr0yz0gd5bv0pwnkc9vk2gv3xqj0h1fpf6"))))
"1qghrskqwwlwxmmvkv7knhlr1a32ngyimycasy5gfazgviljsfn4"))))
(build-system r-build-system)
(inputs
`(("gdal" ,gdal)
@ -15960,14 +15977,14 @@ (define-public r-assertr
(define-public r-parameters
(package
(name "r-parameters")
(version "0.6.0")
(version "0.6.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "parameters" version))
(sha256
(base32
"0zin3ikc013hc713n5zs0dbhc3m4nfw1vhc3924z0mrww8r241xn"))))
"0mylxkf1y6mk4kf6c57x102sf4c800pfasjcfbf1hnsh6ya0m6dy"))))
(properties `((upstream-name . "parameters")))
(build-system r-build-system)
(propagated-inputs
@ -16191,14 +16208,14 @@ (define-public r-subplex
(define-public r-txtplot
(package
(name "r-txtplot")
(version "1.0-3")
(version "1.0-4")
(source
(origin
(method url-fetch)
(uri (cran-uri "txtplot" version))
(sha256
(base32
"1949ab1bzvysdb79g8x1gaknj0ih3d6g63pv9512h5m5l3a6c31h"))))
"00sriml48y70j18jz235dsfm5x3a81bnzskfp3hnv6cbjwwsmca4"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/txtplot/")
(synopsis "Text-based plotting")
@ -17112,17 +17129,19 @@ (define-public r-randtoolbox
(define-public r-lhs
(package
(name "r-lhs")
(version "1.0.1")
(version "1.0.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "lhs" version))
(sha256
(base32
"0lzaqr7xi3ckln5nglv5xf5njm359slpz1jc6s02hpsqdw6armd4"))))
"0n0i1hr9gmc0hfcs2cvpjvdfgm6k26rhcq3q22r8ic0gfj953572"))))
(properties `((upstream-name . "lhs")))
(build-system r-build-system)
(propagated-inputs `(("r-rcpp" ,r-rcpp)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/bertcarnell/lhs")
(synopsis "Latin Hypercube Samples")
(description
@ -18790,14 +18809,14 @@ (define-public r-shapes
(define-public r-anthropometry
(package
(name "r-anthropometry")
(version "1.13")
(version "1.14")
(source
(origin
(method url-fetch)
(uri (cran-uri "Anthropometry" version))
(sha256
(base32
"1f568ri1s6psaby8y737vrkarbjg64v89d4jyw23hy17apdmszr8"))))
"0y52g15pcgs4b68sfczn6nnpdqsialsb4mq3wb9a2gba7qdcf76y"))))
(properties `((upstream-name . "Anthropometry")))
(build-system r-build-system)
(propagated-inputs
@ -18810,6 +18829,8 @@ (define-public r-anthropometry
("r-nnls" ,r-nnls)
("r-rgl" ,r-rgl)
("r-shapes" ,r-shapes)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://cran.r-project.org/web/packages/Anthropometry/")
(synopsis "Statistical methods for anthropometric data")
(description
@ -20804,19 +20825,21 @@ (define-public r-zseq
(define-public r-isoband
(package
(name "r-isoband")
(version "0.2.0")
(version "0.2.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "isoband" version))
(sha256
(base32
"1r023s73qypnvpx18znr9ymylr022m90v65mz2jasn0a1kjrfcbq"))))
"1ndlnv4g9pbd02y50sx4ffg2ccwqbi7fm2v1lh22wdd8pq33d20q"))))
(properties `((upstream-name . "isoband")))
(build-system r-build-system)
(propagated-inputs
`(("r-rcpp" ,r-rcpp)
("r-testthat" ,r-testthat)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/wilkelab/isoband")
(synopsis "Generate isolines and isobands from regularly spaced elevation grids")
(description
@ -20924,13 +20947,13 @@ (define-public r-boa
(define-public r-httpcode
(package
(name "r-httpcode")
(version "0.2.0")
(version "0.3.0")
(source (origin
(method url-fetch)
(uri (cran-uri "httpcode" version))
(sha256
(base32
"06k853ihwzkcx4z3jzazpb03p91frqkwz18jy4fwr8j2nwyqbhgv"))))
"0xig0rvc81hg7mw0iq9s0an1nw24fg0kfs2p2n6dzhwl9w506fjr"))))
(build-system r-build-system)
(home-page "https://github.com/sckott/httpcode")
(synopsis "HTTP status code helper")

51
gnu/packages/dlang.scm
View file

@ -4,6 +4,7 @@
;;; Copyright © 2017 Frederick Muriithi <fredmanglis@gmail.com>
;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2020 Guy Fleury Iteriteka <gfleury@disroot.org>
;;;
;;; This file is part of GNU Guix.
;;;
@ -35,9 +36,11 @@ (define-module (gnu packages dlang)
#:use-module (gnu packages gdb)
#:use-module (gnu packages libedit)
#:use-module (gnu packages llvm)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages textutils))
#:use-module (gnu packages textutils)
#:use-module (gnu packages xorg))
(define-public rdmd
(package
@ -348,3 +351,49 @@ (define-public dub
while providing the opportunity to customize things when
needed.")
(license license:expat)))
(define-public gtkd
(package
(name "gtkd")
(version "3.9.0")
(source
(origin
(method url-fetch/zipbomb)
(uri (string-append "https://gtkd.org/Downloads/sources/GtkD-"
version ".zip"))
(sha256
(base32 "0qv8qlpwwb1d078pnrf0a59vpbkziyf53cf9p6m8ms542wbcxllp"))))
(build-system gnu-build-system)
(native-inputs
`(("unzip" ,unzip)
("ldc" ,ldc)
("pkg-config" ,pkg-config)
("xorg-server-for-tests" ,xorg-server-for-tests)))
(arguments
`(#:test-target "test"
#:make-flags
`("DC=ldc2"
,(string-append "prefix=" (assoc-ref %outputs "out"))
,(string-append "libdir=" (assoc-ref %outputs "out")
"/lib"))
#:phases
(modify-phases %standard-phases
(delete 'configure)
(add-before 'build 'patch-makefile
(lambda* (#:key outputs #:allow-other-keys)
(substitute* "GNUmakefile"
;; We do the tests ourselves.
(("default-goal: libs test") "default-goal: libs")
(("all: libs shared-libs test") "all: libs shared-libs")
;; Work around upstream bug.
(("\\$\\(prefix\\)\\/\\$\\(libdir\\)") "$(libdir)"))
#t))
(add-before 'check 'prepare-x
(lambda _
(system "Xvfb :1 &")
(setenv "DISPLAY" ":1")
#t)))))
(home-page "https://gtkd.org/")
(synopsis "D binding and OO wrapper of GTK+")
(description "This package provides bindings to GTK+ for D.")
(license license:lgpl2.1)))

173
gnu/packages/emacs-xyz.scm
View file

@ -67,6 +67,7 @@
;;; Copyright © 2020 6033fe7de85d <6033fe7de85d@airmail.cc>
;;; Copyright © 2020 John Soo <jsoo1@asu.edu>
;;; Copyright © 2020 Jérémy Korwin-Zmijowski <jeremy@korwin-zmijowski.fr>
;;; Copyright © 2020 Alberto Eleuterio Flores Guerrero <barbanegra+guix@posteo.mx>
;;;
;;; This file is part of GNU Guix.
;;;
@ -596,6 +597,45 @@ (define-public emacs-ghub
handful of functions that are not resource-specific.")
(license license:gpl3+))))
(define-public emacs-typit
;; Last release is from 2017.
(let ((commit "231cb7df43253b84323520b8ed70f128d37003af")
(revision "1"))
(package
(name "emacs-typit")
(version (git-version "0.2.1" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mrkkrp/typit.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "1savrxs7xl92ifyxpxkkzv2didr7lb405h0dwz1bs1wldr5fb53f"))))
(build-system emacs-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'install 'install-dictionaries
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(site-lisp
(string-append
out "/share/emacs/site-lisp/dict")))
(mkdir-p site-lisp)
(copy-recursively "dict" site-lisp)
#t))))))
(propagated-inputs
`(("emacs-f" ,emacs-f)
("emacs-mmt" ,emacs-mmt)))
(home-page "https://github.com/mrkkrp/typit")
(synopsis "Typing game for Emacs with two difficulties")
(description "Emacs Typit is a typing game for Emacs. Words that are
picked randomly from the most frequent words in language you're practicing,
until time is up.")
(license license:gpl3+))))
(define-public emacs-scribble-mode
(let ((commit "217945d54de5e4bb207033f2116baa28f5c5ecf2")
(revision "2"))
@ -2122,6 +2162,26 @@ (define-public emacs-mmm-mode
single buffer.")
(license license:gpl3+)))
(define-public emacs-mmt
(package
(name "emacs-mmt")
(version "0.2.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mrkkrp/mmt.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "13vbfc5597v0gd87qyhn10f93nb477vjpg3jlpphbax9fvkf4gav"))))
(build-system emacs-build-system)
(home-page "https://github.com/mrkkrp/mmt")
(synopsis "Classic tools to write Emacs Lisp macros")
(description "Emacs MMT is a package that contains classic tools for Emacs
Lisp developers who want to write macros with convenience.")
(license license:gpl3+)))
(define-public emacs-tablist
(package
(name "emacs-tablist")
@ -7424,20 +7484,18 @@ (define-public emacs-helm-swoop
(license license:gpl2+)))
(define-public emacs-helm-ag
(let ((commit "2fc02c4ead29bf0db06fd70740cc7c364cb650ac")
(revision "1"))
(package
(name "emacs-helm-ag")
(version (git-version "0.58" revision commit))
(version "0.59")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/syohex/emacs-helm-ag.git")
(commit commit)))
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1gnn0byywbld6afcq1vp92cjvy4wlag9d1wgymnqn86c3b1bcf21"))))
(base32 "0vsz2b5qw4qahlf74059z4p1grinhfz28f0psw4c3qf4jasv3b9j"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-helm" ,emacs-helm)))
@ -7446,7 +7504,7 @@ (define-public emacs-helm-ag
(description
"This package provides a frontend for grepping tools like ag and ack,
as well as features for editing search results.")
(license license:gpl3+))))
(license license:gpl3+)))
;; There hasn't been a tag or release since 2016, so we take the latest
;; commit.
@ -12864,7 +12922,7 @@ (define-public emacs-org-super-agenda
(define-public emacs-org-make-toc
(package
(name "emacs-org-make-toc")
(version "0.4")
(version "0.5")
(source (origin
(method git-fetch)
(uri (git-reference
@ -12873,7 +12931,7 @@ (define-public emacs-org-make-toc
(file-name (git-file-name name version))
(sha256
(base32
"0348iq3bc3rxs5bqdvskyly4agqxiapamqkfm0323620kxl70agw"))))
"180ji6nnj6qj0rs1rdp1zlcrfsqf7ikb44ym8icbp5d6al2s4hnr"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-org" ,emacs-org)
@ -14158,12 +14216,12 @@ (define-public emacs-discover-my-major
(license license:gpl3+)))
(define-public emacs-org-ref
(let ((commit "8c9b5d7efb9f0c1ad5186b8203bdd017f4249129")
(revision "1"))
;; No release since June 2017.
(let ((commit "5bb9be2232db72b04754d7e4c02a3976ad422f6f")
(revision "2"))
(package
(name "emacs-org-ref")
(version (string-append "1.1.1" "-" revision "."
(string-take commit 7)))
(version (git-version "1.1.1" revision commit))
(source
(origin
(method git-fetch)
@ -14172,29 +14230,40 @@ (define-public emacs-org-ref
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1rxz0bjdsayk0slv23i07d9xhj2m7s4hsc81wc2d1cs52dkr5zmz"))))
(base32 "15gcvbfj19kyv4nxa632b261dwhb26m99plq230qhv9ssfwfgxbx"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-dash" ,emacs-dash)
("emacs-f" ,emacs-f)
("emacs-helm" ,emacs-helm)
("emacs-helm-bibtex" ,emacs-helm-bibtex)
("emacs-ivy" ,emacs-ivy)
("emacs-htmlize" ,emacs-htmlize)
("emacs-hydra" ,emacs-hydra)
("emacs-ivy" ,emacs-ivy)
("emacs-key-chord" ,emacs-key-chord)
("emacs-s" ,emacs-s)
("emacs-f" ,emacs-f)
("emacs-pdf-tools" ,emacs-pdf-tools)))
("emacs-pdf-tools" ,emacs-pdf-tools)
("emacs-s" ,emacs-s)))
(home-page "https://github.com/jkitchin/org-ref")
(synopsis "Citations, cross-references and bibliographies in org-mode")
(synopsis "Citations, cross-references and bibliographies in Org mode")
(description
"Lisp code to setup bibliography, cite, ref and label org-mode links.
Also sets up reftex and helm for org-mode citations. The links are
clickable and do things that are useful.
"Org Ref is an Emacs library that provides rich support for citations,
labels and cross-references in Org mode.
The default setup uses helm-bibtex.
The basic idea of Org Ref is that it defines a convenient interface to insert
citations from a reference database (e.g., from BibTeX files), and a set of
functional Org links for citations, cross-references and labels that export
properly to LaTeX, and that provide clickable functionality to the user. Org
Ref interfaces with Helm BibTeX to facilitate citation entry, and it can also
use RefTeX.
You should really read org-ref.org in this package for details.")
It also provides a fairly large number of utilities for finding bad citations,
extracting BibTeX entries from citations in an Org file, and functions to
create and modify BibTeX entries from a variety of sources, most notably from
a DOI.
Org Ref is especially suitable for Org documents destined for LaTeX export and
scientific publication. Org Ref is also useful for research documents and
notes.")
(license license:gpl3+))))
;; This project is unmaintained. Please use emacs-org-re-reveal instead.
@ -22407,3 +22476,59 @@ (define-public emacs-haskell-snippets
(description "Haskell-Snippets is a collection of YASnippet Haskell
snippets for Emacs.")
(license license:expat))))
(define-public emacs-org-roam
(package
(name "emacs-org-roam")
(version "1.0.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/jethrokuan/org-roam.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "08pfa63k194dpk0y2gfa0nzn5lig81q0l9axkq5j4ibj6ifaap4a"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-company" ,emacs-company)
("emacs-dash" ,emacs-dash)
("emacs-emacsql-sqlite" ,emacs-emacsql)
("emacs-f" ,emacs-f)
("emacs-org-ref" ,emacs-org-ref)
("emacs-s" ,emacs-s)))
(home-page "https://github.com/jethrokuan/org-roam/")
(synopsis "Non-hierarchical note-taking with Org mode")
(description "Emacs Org Roam is a solution for taking non-hierarchical
notes with Org mode. Notes are captured without hierarchy and are connected
by tags. Notes can be found and created quickly. Org Roam should also work
as a plug-and-play solution for anyone already using Org mode for their
personal wiki.")
(license license:gpl3+)))
(define-public emacs-uml-mode
;; Package has no release. Version is extracted from "Version:" keyword in
;; main file.
(let ((commit "4c37ac1c4424b2313cd8f16ba48a98a4cc214200")
(revision "1"))
(package
(name "emacs-uml-mode")
(version (git-version "0.0.4" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ianxm/emacs-uml.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "145i4srnfvd1vyibri2a1l6p9mbjvkkwlrpi41134pbarqffcnka"))))
(build-system emacs-build-system)
(home-page "https://github.com/ianxm/emacs-uml")
(synopsis "Minor mode for editing ASCII UML sequence diagrams")
(description "Emacs UML mode is a minor mode that makes it easy to build
ASCII UML sequence diagrams in Emacs, which can be embedded in source code,
comments or emails.")
(license license:gpl3+))))

32
gnu/packages/engineering.scm
View file

@ -1018,22 +1018,42 @@ (define-public linsmith
(define-public volk
(package
(name "volk")
(version "1.3")
(version "2.2.1")
(source
(origin
(method url-fetch)
(uri (string-append "http://libvolk.org/releases/volk-"
(uri (string-append "https://www.libvolk.org/releases/volk-"
version ".tar.gz"))
(sha256
(base32
"1bz3ywc6y5wmz3i8p4z2wbzhns8bc0ywdkl9qnxpcvfcscarbdlh"))))
"1wz5nhmw6np8ka30pgy1qnima3rk2ksln4klfhrj7wah3fian0k9"))))
(build-system cmake-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'install 'wrap-pythonpath
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(python (assoc-ref inputs "python"))
(file (string-append out "/bin/volk_modtool"))
(path (string-append
out
"/lib/python"
,(version-major+minor
(package-version python))
"/site-packages:"
(getenv "PYTHONPATH"))))
(wrap-program file
`("PYTHONPATH" ":" prefix (,path))
`("PATH" ":" prefix
(,(string-append python "/bin:")))))
#t)))))
(inputs
`(("boost" ,boost)))
(native-inputs
`(("python-2" ,python-2)
("python2-cheetah" ,python2-cheetah)))
(home-page "http://libvolk.org/")
`(("python" ,python-wrapper)
("python-mako" ,python-mako)))
(home-page "https://www.libvolk.org/")
(synopsis "Vector-Optimized Library of Kernels")
(description
"@code{volk} contains procedures with machine-specific optimizations

50
gnu/packages/games.scm
View file

@ -397,6 +397,56 @@ (define-public bastet
canyons and wait for the long I-shaped block to clear four rows at a time.")
(license license:gpl3+)))
(define-public blobwars
(package
(name "blobwars")
(version "2.00")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/blobwars/"
"blobwars-" version ".tar.gz"))
(sha256
(base32 "16aagvkx6azf75gm5kaa94bh5npydvhqp3fvdqyfsanzdjgjf1n4"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ;no test
#:make-flags
(let ((out (assoc-ref %outputs "out")))
(list (string-append "PREFIX=" out)
(string-append "BINDIR=" out "/bin/")
"USEPAK=1"
"RELEASE=1"))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'werror-begone
(lambda _
(substitute* "Makefile" (("-Werror") ""))
#t))
(delete 'configure)))) ;no configure script
(native-inputs
`(("gettext" ,gettext-minimal)
("pkg-config" ,pkg-config)))
(inputs
`(("hicolor-icon-theme" ,hicolor-icon-theme)
("sdl" ,(sdl-union (list sdl2
sdl2-image
sdl2-mixer
sdl2-ttf
sdl2-net)))))
(home-page "https://sourceforge.net/projects/blobwars/")
(synopsis "Platform action game featuring a blob with a lot of weapons")
(description "Blobwars: Metal Blob Solid is a 2D platform game, the first
in the Blobwars series. You take on the role of a fearless Blob agent. Your
mission is to infiltrate various enemy bases and rescue as many MIAs as
possible, while battling many vicious aliens.")
(license (list license:gpl2 ; For code and graphics
license:cc0 ; Music and sounds have specific licenses
license:cc-by3.0 ; see /doc/readme
license:cc-by-sa3.0
license:lgpl2.1+
license:bsd-2))))
(define-public cataclysm-dda
(package
(name "cataclysm-dda")

3
gnu/packages/gnome.scm
View file

@ -6741,7 +6741,8 @@ (define-public gdm
name "-" version ".tar.xz"))
(sha256
(base32
"12ypdz9i24hwbl1d1wnnxb8zlvfa4f49n9ac5cl9d6h8qp4b0gb4"))))
"12ypdz9i24hwbl1d1wnnxb8zlvfa4f49n9ac5cl9d6h8qp4b0gb4"))
(patches (search-patches "gdm-default-session.patch"))))
(build-system glib-or-gtk-build-system)
(arguments
'(#:configure-flags

2
gnu/packages/gnuzilla.scm
View file

@ -750,7 +750,7 @@ (define-public icecat
("libxt" ,libxt)
("libffi" ,libffi)
("ffmpeg" ,ffmpeg)
("libvpx" ,libvpx-1.7)
("libvpx" ,libvpx)
("icu4c" ,icu4c)
("pixman" ,pixman)
("pulseaudio" ,pulseaudio)

6
gnu/packages/gpodder.scm
View file

@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019, 2020 Pierre Langlois <pierre.langlois@gmx.com>
;;; Copyright © 2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@ -167,14 +168,13 @@ (define-public python-mygpoclient
(define-public python-podcastparser
(package
(name "python-podcastparser")
(version "0.6.4")
(version "0.6.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "podcastparser" version))
(sha256
(base32
"1ksj1gcmbnm5i43xhpqxbs2mqi6xzawwwkwbh9h6lwa1wxxvv247"))))
(base32 "0k62ppg20i41gcc5x8ddjn7zbpy47hqpxzrq9257g2c71m4qw07b"))))
(native-inputs
`(("python-nose" ,python-nose)))
(build-system python-build-system)

88
gnu/packages/guile-xyz.scm
View file

@ -1140,7 +1140,7 @@ (define-public guile-mastodon
(define-public guile-parted
(package
(name "guile-parted")
(version "0.0.3")
(version "0.0.4")
(source (origin
(method git-fetch)
(uri (git-reference
@ -1149,7 +1149,7 @@ (define-public guile-parted
(file-name (git-file-name name version))
(sha256
(base32
"0kwi777fhfb4rq6fik9bwqzr63k82qjl94dm5lyyyal4rh724xrc"))
"0b7h8psfm9gmmwb65pp5zwzglvwnfmw5j40g09hhf3f7kwxc0mv2"))
(modules '((guix build utils)))))
(build-system gnu-build-system)
(arguments
@ -1679,6 +1679,84 @@ (define-public guile-sly
(home-page "https://dthompson.us/projects/sly.html")
(license license:gpl3+)))
(define-public g-golf
(let ((commit "4a4edf25e4877df9182c77843bdd98ab59e13ef7"))
(package
(name "g-golf")
(version (git-version "1" "683" commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://git.savannah.gnu.org/git/g-golf.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"09p0gf71wbmlm9kri693a8fvr9hl3hhlmlidyadwjdh7853xg0h8"))))
(build-system gnu-build-system)
(native-inputs
`(("autoconf" ,autoconf)
("automake" ,automake)
("texinfo" ,texinfo)
("gettext" ,gettext-minimal)
("libtool" ,libtool)
("pkg-config" ,pkg-config)))
(inputs
`(("guile" ,guile-2.2)
("guile-lib" ,guile-lib)
("clutter" ,clutter)
("gtk" ,gtk+)
("glib" ,glib)))
(propagated-inputs
`(("gobject-introspection" ,gobject-introspection)))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'configure 'tests-work-arounds
(lambda* (#:key inputs #:allow-other-keys)
;; In build environment, There is no /dev/tty
(substitute*
"test-suite/tests/gobject.scm"
(("/dev/tty") "/dev/null"))))
(add-before 'configure 'substitute-libs
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((get (lambda (key lib)
(string-append (assoc-ref inputs key) "/lib/" lib)))
(libgi (get "gobject-introspection" "libgirepository-1.0"))
(libglib (get "glib" "libglib-2.0"))
(libgobject (get "glib" "libgobject-2.0"))
(libgdk (get "gtk" "libgdk-3")))
(substitute* "configure"
(("SITEDIR=\"\\$datadir/g-golf\"")
"SITEDIR=\"$datadir/guile/site/$GUILE_EFFECTIVE_VERSION\"")
(("SITECCACHEDIR=\"\\$libdir/g-golf/")
"SITECCACHEDIR=\"$libdir/"))
(substitute* "g-golf/init.scm"
(("libgirepository-1.0") libgi)
(("libglib-2.0") libglib)
(("libgdk-3") libgdk)
(("libgobject-2.0") libgobject)
(("\\(dynamic-link \"libg-golf\"\\)")
(format #f "~s"
`(dynamic-link
(format #f "~alibg-golf"
(if (getenv "GUILE_GGOLF_UNINSTALLED")
""
,(format #f "~a/lib/"
(assoc-ref outputs "out"))))))))
(setenv "GUILE_AUTO_COMPILE" "0")
(setenv "GUILE_GGOLF_UNINSTALLED" "1")
#t))))))
(home-page "https://www.gnu.org/software/g-golf/")
(synopsis "Guile bindings for GObject Introspection")
(description
"G-Golf (Gnome: (Guile Object Library for)) is a library for developing
modern applications in Guile Scheme. It comprises a direct binding to the
GObject Introspection API and higher-level functionality for importing Gnome
libraries and making GObject classes (and methods) available in Guile's
object-oriented programming system, GOOPS.")
(license license:lgpl3+))))
(define-public g-wrap
(package
(name "g-wrap")
@ -2722,11 +2800,11 @@ (define-public emacsy
(license license:gpl3+)))
(define-public emacsy-minimal
(let ((commit "f3bf0dbd803d7805b6ae8303253507ad13922293"))
(let ((commit "d459ca1d3d09e7624e662bc4cfc3596850796fc6"))
(package
(inherit emacsy)
(name "emacsy-minimal")
(version (git-version "v0.4.1" "19" commit))
(version (git-version "v0.4.1" "28" commit))
(source (origin
(method git-fetch)
(uri (git-reference
@ -2735,7 +2813,7 @@ (define-public emacsy-minimal
(file-name (git-file-name name version))
(sha256
(base32
"0ivy28km1p7nlrf63xx3hvrpxf5ld5amk1wcan3k7sqv1kq9mqdb"))))
"1ps15w8cxj9kc18gmvys9jv9xa1qqa7m43ismv34l3cmhddrn0sr"))))
(build-system gnu-build-system)
(inputs
`(("guile" ,guile-2.2)

31
gnu/packages/hardware.scm
View file

@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@ -17,6 +18,7 @@
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages hardware)
#:use-module (gnu packages autotools)
#:use-module (gnu packages compression)
#:use-module (gnu packages gcc)
#:use-module (gnu packages glib)
@ -276,3 +278,32 @@ (define-public wavemon
;; Source file headers still say GPL2+, but the authorial intent
;; (from COPYING and the F9 'about' screen) is clearly GPL3+.
(license license:gpl3+)))
(define-public rkdeveloptool
(let ((commit "6e92ebcf8b1812da02663494a68972f956e490d3")
(revision "0"))
(package
(name "rkdeveloptool")
(version (git-version "1.3" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/rockchip-linux/rkdeveloptool.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "0zwrkqfxd671iy69v3q0844gfdpm1yk51i9qh2rqc969bd8glxga"))))
(build-system gnu-build-system)
(native-inputs
`(("autoconf" ,autoconf)
("automake" ,automake)
("pkg-config" ,pkg-config)))
(inputs
`(("libusb" ,libusb)))
(home-page "https://github.com/rockchip-linux/rkdeveloptool")
(synopsis "Read from and write to RockChicp devices over USB")
(description
"Rkdeveloptool can read from and write to RockChip devices over USB, such
as the Pinebook Pro.")
(license license:gpl2+))))

8
gnu/packages/i2p.scm
View file

@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019 Jakob L. Kreuze <zerodaysfordays@sdf.org>
;;; Copyright © 2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@ -21,7 +22,6 @@ (define-module (gnu packages i2p)
#:use-module (gnu packages compression)
#:use-module (gnu packages tls)
#:use-module (gnu packages upnp)
#:use-module (gnu packages web)
#:use-module (guix packages)
#:use-module (guix git-download)
#:use-module (guix build-system cmake)
@ -30,7 +30,7 @@ (define-module (gnu packages i2p)
(define-public i2pd
(package
(name "i2pd")
(version "2.29.0")
(version "2.31.0")
(source
(origin
(method git-fetch)
@ -39,12 +39,11 @@ (define-public i2pd
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1issg3aidwikk4g12sa8q81zzp0hd0g8wdy2dx4899z8yrscl300"))))
(base32 "1q2gxz041ha9n5lfn91iy11sdf3z7d806vcq4z43m7lf92m7i4nn"))))
(build-system cmake-build-system)
(inputs `(("boost" ,boost)
("miniupnpc" ,miniupnpc)
("openssl" ,openssl)
("websocketpp" ,websocketpp)
("zlib" ,zlib)))
(arguments '(#:configure-flags
(let ((source (assoc-ref %build-inputs "source")))
@ -52,7 +51,6 @@ (define-public i2pd
"-DWITH_PCH=OFF"
"-DWITH_STATIC=OFF"
"-DWITH_UPNP=ON"
"-DWITH_WEBSOCKETS=ON"
"-DWITH_LIBRARY=ON"
"-DBUILD_SHARED_LIBS=ON"
"-DWITH_BINARY=ON"))

16
gnu/packages/kawa.scm
View file

@ -1,6 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019 Carlo Zancanaro <carlo@zancanaro.id.au>
;;; Copyright © 2019 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@ -27,18 +28,25 @@ (define-module (gnu packages kawa)
(define-public kawa
(package
(name "kawa")
(version "3.0")
(version "3.1.1")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://gnu/kawa/kawa-" version ".tar.gz"))
(sha256
(base32
"1k9qpydc64ar4aqyg3q7jmmxy503ayj85227qfhc5n6ngchqavhy"))))
(base32 "06g015zjlfgsx0n4lb326czkbf1grlx0n6dx074m808hdg6m16lc"))))
(build-system gnu-build-system)
(arguments
`(#:parallel-build? #f
#:parallel-tests? #f))
#:parallel-tests? #f
#:phases
(modify-phases %standard-phases
(add-after 'install 'wrap-kawa
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(wrap-program (string-append out "/share/kawa/bin/kawa")
`("JAVA_HOME" ":" = (,(assoc-ref inputs "icedtea"))))
#t))))))
(inputs
`(("icedtea" ,icedtea-8 "jdk")))
(home-page "https://www.gnu.org/software/kawa/")

24
gnu/packages/linux.scm
View file

@ -369,50 +369,50 @@ (define (%upstream-linux-source version hash)
(sha256 hash)))
(define-public linux-libre-5.6-version "5.6.3")
(define-public linux-libre-5.6-version "5.6.4")
(define-public linux-libre-5.6-pristine-source
(let ((version linux-libre-5.6-version)
(hash (base32 "1ajh1iw3bplm6ckcycg45wfmmqkvfiqmh6i3m1895dfapfd6h4qx")))
(hash (base32 "14cxbc9xi4s3xwx4yb1yd4z0kidsk3d443skf5sgmdhcalg79wax")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-5.6)))
(define-public linux-libre-5.4-version "5.4.31")
(define-public linux-libre-5.4-version "5.4.32")
(define-public linux-libre-5.4-pristine-source
(let ((version linux-libre-5.4-version)
(hash (base32 "1svf4wf4j1vqhdpgx63ry4c99fc54d9nfi4d1xm7z209z3w86451")))
(hash (base32 "1czjjnln1cqrnjxw0md6mpw9haw9abdyvmxnjds56ym4nzx9jb8r")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-5.4)))
(define-public linux-libre-4.19-version "4.19.114")
(define-public linux-libre-4.19-version "4.19.115")
(define-public linux-libre-4.19-pristine-source
(let ((version linux-libre-4.19-version)
(hash (base32 "03hz6vg5bg728ilbm4z997pf52cgxzsxb03vz5cs55gwdbfa0h0y")))
(hash (base32 "1hh170z3mv181l6cc6qqc12wif5jsmxbh2qxbq6b9km5irydkchi")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.19)))
(define-public linux-libre-4.14-version "4.14.175")
(define-public linux-libre-4.14-version "4.14.176")
(define-public linux-libre-4.14-pristine-source
(let ((version linux-libre-4.14-version)
(hash (base32 "0b12w0d21sk261jr4p1pm32v0r20a5c2j1p5hasdqw80sb2hli6b")))
(hash (base32 "18jwxhf29ax54xnylmz9zfkslnxw7y3h215dbfmmvddfp9b0kbmw")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.14)))
(define-public linux-libre-4.9-version "4.9.218")
(define-public linux-libre-4.9-version "4.9.219")
(define-public linux-libre-4.9-pristine-source
(let ((version linux-libre-4.9-version)
(hash (base32 "1ka98c8sbfipzll6ss9fcsn26lh4cy60372yfw27pif4brhnwfnz")))
(hash (base32 "0i5wlyp11ss9p035bhq73xjx8iyk5dk4ynvd7msw5qfkrs6265vb")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.9)))
(define-public linux-libre-4.4-version "4.4.218")
(define-public linux-libre-4.4-version "4.4.219")
(define-public linux-libre-4.4-pristine-source
(let ((version linux-libre-4.4-version)
(hash (base32 "0qzhcy8i111jbpnkpzq7hqf9nkwq4s7smi820hfvnmd2ky7cns7a")))
(hash (base32 "1mpxqb2m24ay4n9px4n2cyklxy4lhnv9q6wlvilx13rs5qfbb62f")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.4)))

81
gnu/packages/lisp-xyz.scm
View file

@ -1711,7 +1711,7 @@ (define-public ecl-nibbles
(define-public sbcl-ironclad
(package
(name "sbcl-ironclad")
(version "0.48")
(version "0.49")
(source
(origin
(method git-fetch)
@ -1719,8 +1719,7 @@ (define-public sbcl-ironclad
(url "https://github.com/sharplispers/ironclad/")
(commit (string-append "v" version))))
(sha256
(base32
"1wzczpgvgjc5h8ghz75kxi7iykmqxqchdhgdhkif9j99kyqvbyam"))
(base32 "0kbzqg2aasrhjwy3nrzy2ddy809n1j045w4qkyc3r2syqd203d4q"))
(file-name (git-file-name name version))))
(build-system asdf-build-system/sbcl)
(native-inputs
@ -1728,7 +1727,8 @@ (define-public sbcl-ironclad
`(("rt" ,sbcl-rt)))
(inputs
`(("bordeaux-threads" ,sbcl-bordeaux-threads)
("flexi-streams" ,sbcl-flexi-streams)))
("flexi-streams" ,sbcl-flexi-streams)
("trivial-garbage" ,sbcl-trivial-garbage)))
(synopsis "Cryptographic toolkit written in Common Lisp")
(description
"Ironclad is a cryptography library written entirely in Common Lisp.
@ -6321,10 +6321,10 @@ (define-public cl-mk-string-metrics
(sbcl-package->cl-source-package sbcl-mk-string-metrics))
(define-public sbcl-cl-str
(let ((commit "3d5ec86e3a0199e5973aacde951086dfd754b5e5"))
(let ((commit "eb480f283e28802d67b35bf916506701152f9a2a"))
(package
(name "sbcl-cl-str")
(version (git-version "0.8" "1" commit))
(version (git-version "0.17" "1" commit))
(home-page "https://github.com/vindarel/cl-str")
(source (origin
(method git-fetch)
@ -6332,12 +6332,13 @@ (define-public sbcl-cl-str
(url home-page)
(commit commit)))
(sha256
(base32 "0szzzbygw9h985yxz909vvqrp69pmpcpahn7hn350lnyjislk9ga"))
(base32 "1hpq5m8zjjnzns370zy27z2vcm1p8n2ka5ij2x67gyc9amz9vla0"))
(file-name (git-file-name name version))))
(build-system asdf-build-system/sbcl)
(inputs
`(("cl-ppcre" ,sbcl-cl-ppcre)
("cl-ppcre-unicode" ,sbcl-cl-ppcre-unicode)))
("cl-ppcre-unicode" ,sbcl-cl-ppcre-unicode)
("cl-change-case" ,sbcl-cl-change-case)))
(native-inputs
`(("prove" ,sbcl-prove)
("prove-asdf" ,sbcl-prove-asdf)))
@ -11358,3 +11359,67 @@ (define-public sbcl-enchant
(define-public cl-enchant
(sbcl-package->cl-source-package sbcl-enchant))
(define-public sbcl-cl-change-case
(let ((commit "5ceff2a5f8bd845b6cb510c6364176b27a238fd3"))
(package
(name "sbcl-cl-change-case")
(version (git-version "0.1.0" "1" commit))
(home-page "https://github.com/rudolfochrist/cl-change-case")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "1afyglglk9z3yg8gylcl301bl2r8vq3sllyznzj9s5xi5gs6qyf2"))))
(build-system asdf-build-system/sbcl)
(inputs
`(("cl-ppcre" ,sbcl-cl-ppcre)
("cl-ppcre-unicode" ,sbcl-cl-ppcre-unicode)))
(native-inputs
`(("fiveam" ,sbcl-fiveam)))
(arguments
'(;; FIXME: Test pass but phase fails with 'Component
;; "cl-change-case-test" not found, required by'.
#:tests? #f
#:test-asd-file "cl-change-case-test.asd"))
(synopsis "Convert Common Lisp strings between camelCase, PascalCase and more")
(description
"@code{cl-change-case} is library to convert strings between camelCase,
PascalCase, snake_case, param-case, CONSTANT_CASE and more.")
(license license:llgpl))))
(define-public cl-change-case
(sbcl-package->cl-source-package sbcl-cl-change-case))
(define-public sbcl-moptilities
(let ((commit "a436f16b357c96b82397ec018ea469574c10dd41"))
(package
(name "sbcl-moptilities")
(version (git-version "0.3.13" "1" commit))
(home-page "https://github.com/gwkkwg/moptilities/")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "1q12bqjbj47lx98yim1kfnnhgfhkl80102fkgp9pdqxg0fp6g5fc"))))
(build-system asdf-build-system/sbcl)
(inputs
`(("closer-mop" ,sbcl-closer-mop)))
(native-inputs
`(("lift" ,sbcl-lift)))
(synopsis "Compatibility layer for Common Lisp MOP implementation differences")
(description
"MOP utilities provide a common interface between Lisps and make the
MOP easier to use.")
(license license:expat))))
(define-public cl-moptilities
(sbcl-package->cl-source-package sbcl-moptilities))

33
gnu/packages/lisp.scm
View file

@ -7,7 +7,7 @@
;;; Copyright © 2016, 2017 Andy Patterson <ajpatter@uwaterloo.ca>
;;; Copyright © 2017, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017, 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Benjamin Slade <slade@jnanam.net>
;;; Copyright © 2018 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2018, 2019 Pierre Neidhardt <mail@ambrevar.xyz>
@ -855,7 +855,7 @@ (define-public confusion-mdl
(define-public txr
(package
(name "txr")
(version "234")
(version "235")
(source
(origin
(method git-fetch)
@ -863,24 +863,29 @@ (define-public txr
(url "http://www.kylheku.com/git/txr/")
(commit (string-append "txr-" version))))
(file-name (git-file-name name version))
(patches (search-patches "txr-shell.patch"))
(sha256
(base32
"0c9qsj4xwc24c9g02mr5n97m4d87d4n0pcc2c2n58l2vg5dnzba0"))))
(base32 "0kpqk2x0sz7sqxsrhasq0xnljjlnxwhh4xjx2nii0zy2jkv4vsbn"))))
(build-system gnu-build-system)
(arguments
'(#:configure-flags '("cc=gcc")
#:phases (modify-phases %standard-phases
'(#:configure-flags
(list "cc=gcc"
(string-append "--prefix=" (assoc-ref %outputs "out")))
#:test-target "tests"
#:phases
(modify-phases %standard-phases
(replace 'configure
;; ./configure is a hand-written script that can't handle standard
;; autotools arguments like CONFIG_SHELL.
(lambda* (#:key configure-flags #:allow-other-keys)
(setenv "txr_shell" (which "bash"))
(apply invoke "./configure" configure-flags)
#t))
(add-after 'configure 'fix-tests
(lambda _
(substitute* "tests/017/realpath.tl"
(substitute* (list "tests/017/realpath.tl"
"tests/017/realpath.expected")
(("/usr/bin") "/"))
(substitute* "tests/017/realpath.expected"
(("/usr/bin") "/"))
#t))
(replace 'check
(lambda _
(invoke "make" "tests"))))))
#t)))))
(native-inputs
`(("bison" ,bison)
("flex" ,flex)))

4
gnu/packages/mail.scm
View file

@ -387,7 +387,7 @@ (define-public fetchmail
(define-public mutt
(package
(name "mutt")
(version "1.13.4")
(version "1.13.5")
(source (origin
(method url-fetch)
(uri (list
@ -397,7 +397,7 @@ (define-public mutt
version ".tar.gz")))
(sha256
(base32
"016dzx2c0kr9xgnw4nfzpkn4nvpk56rdlcqhrwa820fq8083yzdm"))
"0lx65a44b03rbvcrz0y9syrik67fx3hvblxyyvz5l9bb7rdipmvc"))
(patches (search-patches "mutt-store-references.patch"))))
(build-system gnu-build-system)
(inputs

4
gnu/packages/man.scm
View file

@ -164,7 +164,7 @@ (define-public man-db
(define-public man-pages
(package
(name "man-pages")
(version "5.05")
(version "5.06")
(source
(origin
(method url-fetch)
@ -174,7 +174,7 @@ (define-public man-pages
(string-append "mirror://kernel.org/linux/docs/man-pages/Archive/"
"man-pages-" version ".tar.xz")))
(sha256
(base32 "0izb6shcczvg37cyd3kzxsfsrffqj1qw9nqhhq9mi4kd36qkbcfm"))))
(base32 "0l7ypgl36jswa077qvdh1rcsvnwr64vja6cc32bab86sm41akf3h"))))
(build-system gnu-build-system)
(arguments
'(#:phases (modify-phases %standard-phases (delete 'configure))

4
gnu/packages/mpd.scm
View file

@ -92,7 +92,7 @@ (define-public libmpdclient
(define-public mpd
(package
(name "mpd")
(version "0.21.21")
(version "0.21.22")
(source (origin
(method url-fetch)
(uri
@ -101,7 +101,7 @@ (define-public mpd
"/mpd-" version ".tar.xz"))
(sha256
(base32
"1kk8q5z99zdzwv3angn03jwnxhqdad0pnyi5j67c2qiv1rgv3gg1"))))
"18lvyv3crijki5nxjdhf1byayyavdvj07dk6rm856n4vi78qfmjn"))))
(build-system meson-build-system)
(arguments
`(#:configure-flags '("-Ddocumentation=true"))) ;the default is 'false'...

4
gnu/packages/networking.scm
View file

@ -2024,14 +2024,14 @@ (define-public mtr
(define-public strongswan
(package
(name "strongswan")
(version "5.8.2")
(version "5.8.4")
(source
(origin
(method url-fetch)
(uri (string-append "https://download.strongswan.org/strongswan-"
version ".tar.bz2"))
(sha256
(base32 "03j3fx357bh89n44a5v9wdc92azdx2d37j7jmlyr4z1kwzdhv446"))))
(base32 "0g2m08gmgdi3qvvqz6zy7n16np53sp232xd0rdc2vdhk73img6id"))))
(build-system gnu-build-system)
(arguments
`(#:phases

8
gnu/packages/package-management.scm
View file

@ -111,9 +111,9 @@ (define-public guix
;; Latest version of Guix, which may or may not correspond to a release.
;; Note: the 'update-guix-package.scm' script expects this definition to
;; start precisely like this.
(let ((version "1.0.1")
(commit "09844816c77caaa60f4149f99a34733966724627")
(revision 15))
(let ((version "1.1.0")
(commit "d62c9b2671be55ae0305bebfda17b595f33797f2")
(revision 0))
(package
(name "guix")
@ -129,7 +129,7 @@ (define-public guix
(commit commit)))
(sha256
(base32
"1fciffls6cw9zz13vig5x37r73qxc0irzyh0caimciddlksvabf7"))
"0v76hb0pidfgvxa22gq6hqf5yc3m527gl7hpzykazgjh881g2vmy"))
(file-name (string-append "guix-" version "-checkout"))))
(build-system gnu-build-system)
(arguments

91
gnu/packages/patches/gdm-default-session.patch Normal file
View file

@ -0,0 +1,91 @@
This patch ensures '.desktop' files are picked up in the system profile
and not in the directories listed in $XDG_DATA_DIRS. The latter includes
'gnome-session.desktop', which should be used if it's in
/run/current-system/profile, and only then.
Fixes <https://bugs.gnu.org/37831>.
diff --git a/daemon/gdm-session.c b/daemon/gdm-session.c
index 6a116a8..02c1458 100644
--- a/daemon/gdm-session.c
+++ b/daemon/gdm-session.c
@@ -348,24 +348,18 @@ get_system_session_dirs (GdmSession *self)
GArray *search_array = NULL;
char **search_dirs;
int i;
- const gchar * const *system_data_dirs = g_get_system_data_dirs ();
static const char *x_search_dirs[] = {
"/etc/X11/sessions/",
DMCONFDIR "/Sessions/",
DATADIR "/gdm/BuiltInSessions/",
- DATADIR "/xsessions/",
+ "/run/current-system/profile/share/xsessions/"
};
static const char *wayland_search_dir = DATADIR "/wayland-sessions/";
search_array = g_array_new (TRUE, TRUE, sizeof (char *));
- for (i = 0; system_data_dirs[i]; i++) {
- gchar *dir = g_build_filename (system_data_dirs[i], "xsessions", NULL);
- g_array_append_val (search_array, dir);
- }
-
g_array_append_vals (search_array, x_search_dirs, G_N_ELEMENTS (x_search_dirs));
#ifdef ENABLE_WAYLAND_SUPPORT
@@ -373,16 +367,7 @@ get_system_session_dirs (GdmSession *self)
#ifdef ENABLE_USER_DISPLAY_SERVER
g_array_prepend_val (search_array, wayland_search_dir);
- for (i = 0; system_data_dirs[i]; i++) {
- gchar *dir = g_build_filename (system_data_dirs[i], "wayland-sessions", NULL);
- g_array_insert_val (search_array, i, dir);
- }
#else
- for (i = 0; system_data_dirs[i]; i++) {
- gchar *dir = g_build_filename (system_data_dirs[i], "wayland-sessions", NULL);
- g_array_append_val (search_array, dir);
- }
-
g_array_append_val (search_array, wayland_search_dir);
#endif
}
diff --git a/libgdm/gdm-sessions.c b/libgdm/gdm-sessions.c
index afbc5c0..bb5e3e6 100644
--- a/libgdm/gdm-sessions.c
+++ b/libgdm/gdm-sessions.c
@@ -238,19 +238,11 @@ collect_sessions (void)
"/etc/X11/sessions/",
DMCONFDIR "/Sessions/",
DATADIR "/gdm/BuiltInSessions/",
- DATADIR "/xsessions/",
- NULL
+ "/run/current-system/profile/share/xsessions/"
};
xorg_search_array = g_array_new (TRUE, TRUE, sizeof (char *));
- const gchar * const *system_data_dirs = g_get_system_data_dirs ();
-
- for (i = 0; system_data_dirs[i]; i++) {
- session_dir = g_build_filename (system_data_dirs[i], "xsessions", NULL);
- g_array_append_val (xorg_search_array, session_dir);
- }
-
g_array_append_vals (xorg_search_array, xorg_search_dirs, G_N_ELEMENTS (xorg_search_dirs));
#ifdef ENABLE_WAYLAND_SUPPORT
@@ -261,11 +253,6 @@ collect_sessions (void)
wayland_search_array = g_array_new (TRUE, TRUE, sizeof (char *));
- for (i = 0; system_data_dirs[i]; i++) {
- session_dir = g_build_filename (system_data_dirs[i], "wayland-sessions", NULL);
- g_array_append_val (wayland_search_array, session_dir);
- }
-
g_array_append_vals (wayland_search_array, wayland_search_dirs, G_N_ELEMENTS (wayland_search_dirs));
#endif

34
gnu/packages/patches/libvpx-use-after-free-in-postproc.patch
View file

@ -1,34 +0,0 @@
From 52add5896661d186dec284ed646a4b33b607d2c7 Mon Sep 17 00:00:00 2001
From: Jerome Jiang <jianj@google.com>
Date: Wed, 23 May 2018 15:43:00 -0700
Subject: [PATCH] VP8: Fix use-after-free in postproc.
The pointer in vp8 postproc refers to show_frame_mi which is only
updated on show frame. However, when there is a no-show frame which also
changes the size (thus new frame buffers allocated), show_frame_mi is
not updated with new frame buffer memory.
Change the pointer in postproc to mi which is always updated.
Bug: 842265
Change-Id: I33874f2112b39f74562cba528432b5f239e6a7bd
---
vp8/common/postproc.c | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/vp8/common/postproc.c b/vp8/common/postproc.c
index d67ee8a57..8c292d616 100644
--- a/vp8/common/postproc.c
+++ b/vp8/common/postproc.c
@@ -65,7 +65,7 @@ void vp8_deblock(VP8_COMMON *cm, YV12_BUFFER_CONFIG *source,
double level = 6.0e-05 * q * q * q - .0067 * q * q + .306 * q + .0065;
int ppl = (int)(level + .5);
- const MODE_INFO *mode_info_context = cm->show_frame_mi;
+ const MODE_INFO *mode_info_context = cm->mi;
int mbr, mbc;
/* The pixel thresholds are adjusted according to if or not the macroblock
--
2.19.0

38
gnu/packages/patches/python-jedi-deleted-variables.patch
View file

@ -1,38 +0,0 @@
Fix test failure in some environments, including Guix.
Taken from upstream:
https://github.com/davidhalter/jedi/commit/bec87f7ff82b0731713c6520a14c213341b4cecf
diff --git a/test/completion/basic.py b/test/completion/basic.py
index b40068179..3ff919ca6 100644
--- a/test/completion/basic.py
+++ b/test/completion/basic.py
@@ -209,11 +209,11 @@ def global_as_import():
deleted_var = 3
del deleted_var
-#? int()
+#?
deleted_var
-#? ['deleted_var']
+#? []
deleted_var
-#! ['deleted_var = 3']
+#! []
deleted_var
# -----------------
diff --git a/test/test_api/test_full_name.py b/test/test_api/test_full_name.py
index 4fdb861b0..6858b6ca8 100644
--- a/test/test_api/test_full_name.py
+++ b/test/test_api/test_full_name.py
@@ -112,7 +112,8 @@ def test_os_path(Script):
def test_os_issues(Script):
"""Issue #873"""
- assert [c.name for c in Script('import os\nos.nt''').complete()] == ['nt']
+ # nt is not found, because it's deleted
+ assert [c.name for c in Script('import os\nos.nt''').complete()] == []
def test_param_name(Script):

59
gnu/packages/patches/txr-shell.patch
View file

@ -1,59 +0,0 @@
Use the current shell instead of trying to find another one and
failing to do so.
diff --git a/configure b/configure
index f1adb919..7891b4dc 100755
--- a/configure
+++ b/configure
@@ -26,28 +26,6 @@
# OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-#
-# The #!/bin/sh might be some legacy piece of crap,
-# not even up to 1990 POSIX.2 spec. So the first step
-# is to look for a better shell in some known places
-# and re-execute ourselves with that interpreter.
-#
-
-if test x$txr_shell = x ; then
- for shell in /bin/bash /usr/bin/bash /usr/xpg4/bin/sh ; do
- if test -x $shell ; then
- txr_shell=$shell
- break
- fi
- done
- if test x$txr_shell = x ; then
- echo "No known POSIX shell found: falling back on /bin/sh, which may not work"
- txr_shell=/bin/sh
- fi
- export txr_shell
- exec $txr_shell $0 ${@+"$@"}
-fi
-
set -u
#
@@ -190,13 +168,6 @@ while [ $# -gt 0 ] ; do
exit 1
fi
- eval "var_exists=\${$var+y}"
-
- if [ "$var_exists" != y ] ; then
- printf "$0: nonexistent option: '%s'\n" "$1"
- exit 1
- fi
-
eval "$var='$val'"
eval "var_given_exists=\${${var}_given+y}"
@@ -208,6 +179,8 @@ while [ $# -gt 0 ] ; do
shift
done
+txr_shell=$CONFIG_SHELL
+
#
# If --help was given (or --help=<nonempty> or help=<nonempty>) then
# print help and exit. The termination status is failed, to indicate

190
gnu/packages/perl.scm
View file

@ -53,6 +53,7 @@ (define-module (gnu packages perl)
#:use-module (guix build-system perl)
#:use-module (gnu packages base)
#:use-module (gnu packages compression)
#:use-module (gnu packages databases)
#:use-module (gnu packages freedesktop)
#:use-module (gnu packages gd)
#:use-module (gnu packages less)
@ -386,6 +387,49 @@ (define-public perl-authen-dechpwd
pure Perl backup version for systems that cannot handle XS.")
(license gpl2+)))
(define-public perl-authen-passphrase
(package
(name "perl-authen-passphrase")
(version "0.008")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/Z/ZE/ZEFRAM/Authen-Passphrase-"
version ".tar.gz"))
(sha256
(base32
"0qq4krap687rxf6xr31bg5nj5dqmm1frcm7fq249v1bxc4h4bnsm"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-build" ,perl-module-build)
("perl-test-pod" ,perl-test-pod)
("perl-test-pod-coverage" ,perl-test-pod-coverage)))
(propagated-inputs
`(("perl-authen-dechpwd" ,perl-authen-dechpwd)
("perl-crypt-des" ,perl-crypt-des)
("perl-crypt-eksblowfish" ,perl-crypt-eksblowfish)
("perl-crypt-mysql" ,perl-crypt-mysql)
("perl-crypt-passwdmd5" ,perl-crypt-passwdmd5)
("perl-crypt-unixcrypt_xs" ,perl-crypt-unixcrypt_xs)
("perl-data-entropy" ,perl-data-entropy)
("perl-digest-md4" ,perl-digest-md4)
("perl-module-runtime" ,perl-module-runtime)
("perl-params-classify" ,perl-params-classify)))
(home-page "https://metacpan.org/release/Authen-Passphrase")
(synopsis "Hashed passwords/passphrases as objects")
(description "@code{Authen-Passphrase} is the base class for a
system of objects that encapsulate passphrases. An object of this
type is a passphrase recogniser; its job is to recognise whether an
offered passphrase is the right one. For security such passphrase
recognisers usually do not themselves know the passphrase they are
looking for; they can merely recognise it when they see it. There are
many schemes in use to achieve this effect and the intent of this
class is to provide a consistent interface to them all. In addition
to the base class, this module also contains implementations of
several specific passphrase schemes.")
(license perl-license)))
(define-public perl-autovivification
(package
(name "perl-autovivification")
@ -1849,6 +1893,55 @@ (define-public perl-cpanel-json-xs
versa.")
(license (package-license perl))))
(define-public perl-crypt-cbc
(package
(name "perl-crypt-cbc")
(version "2.33")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/L/LD/LDS/Crypt-CBC-"
version ".tar.gz"))
(sha256
(base32
"0ig698lmpjz7fslnznxm0609lvlnvf4f3s370082nzycnqhxww3a"))))
(build-system perl-build-system)
(native-inputs
`(("perl-crypt-rijndael" ,perl-crypt-rijndael)))
(home-page "https://metacpan.org/release/Crypt-CBC")
(synopsis "Encrypt Data with Cipher Block Chaining Mode")
(description "@code{Crypt::CBC} is a Perl-only implementation of
the cryptographic Cipher Block Chaining (CBC) mode. In combination
with a block cipher such as @code{Crypt::Rijndael} you can encrypt and
decrypt messages of arbitrarily long length. The encrypted messages
are compatible with the encryption format used by SSLeay.")
(license perl-license)))
(define-public perl-crypt-des
(package
(name "perl-crypt-des")
(version "2.07")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/D/DP/DPARIS/Crypt-DES-"
version ".tar.gz"))
(sha256
(base32
"1rypxlhpd1jc0c327aghgl9y6ls47drmpvn0a40b4k3vhfsypc9d"))))
(build-system perl-build-system)
(native-inputs
`(("perl-crypt-cbc" ,perl-crypt-cbc)))
(home-page "https://metacpan.org/release/Crypt-DES")
(synopsis "DES encryption module")
(description "@code{Crypt::DES} is an XS-based implementation of
the DES cryptography algorithm. The module implements the
@code{Crypt::CBC} interface which has blocksize, keysize, encrypt and
decrypt functions.")
(license bsd-3)))
(define-public perl-crypt-eksblowfish
(package
(name "perl-crypt-eksblowfish")
@ -1883,6 +1976,57 @@ (define-public perl-crypt-eksblowfish
password hashing algorithm based on Eksblowfish.")
(license perl-license)))
(define-public perl-crypt-mysql
(package
(name "perl-crypt-mysql")
(version "0.04")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/I/IK/IKEBE/Crypt-MySQL-"
version ".tar.gz"))
(sha256
(base32
"1qyx6ha13r0rh80ldv5wy2bq2pa74igwh8817xlapsfgxymdzswk"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-build" ,perl-module-build)
("perl-dbd-mysql" ,perl-dbd-mysql)))
(propagated-inputs
`(("perl-digest-sha1" ,perl-digest-sha1)))
(home-page "https://metacpan.org/release/Crypt-MySQL")
(synopsis "Emulate the MySQL PASSWORD() function")
(description "@code{Crypt::MySQL} emulates the MySQL PASSWORD()
function. The module does not depend on an interface to the MySQL
database server. This enables the comparison of encrypted passwords
without the need for a real MySQL environment.")
(license perl-license)))
(define-public perl-crypt-passwdmd5
(package
(name "perl-crypt-passwdmd5")
(version "1.40")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/R/RS/RSAVAGE/Crypt-PasswdMD5-"
version ".tgz"))
(sha256
(base32
"0j0r74f18nk63phddzqbf7wqma2ci4p4bxvrwrxsy0aklbp6lzdp"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-build" ,perl-module-build)))
(home-page "https://metacpan.org/release/Crypt-PasswdMD5")
(synopsis "Interoperable MD5-based crypt() functions")
(description "@code{Crypt::PasswdMD5} provides various
crypt()-compatible interfaces to the MD5-based crypt() function found
in various *nixes. It is based on the implementation found on FreeBSD
2.2.[56]-RELEASE.")
(license perl-license)))
(define-public perl-crypt-randpasswd
(package
(name "perl-crypt-randpasswd")
@ -1957,6 +2101,29 @@ (define-public perl-crypt-rc4
(description "A pure Perl implementation of the RC4 algorithm.")
(license (package-license perl))))
(define-public perl-crypt-unixcrypt_xs
(package
(name "perl-crypt-unixcrypt_xs")
(version "0.11")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/B/BO/BORISZ/Crypt-UnixCrypt_XS-"
version ".tar.gz"))
(sha256
(base32
"1ajg3x6kwxy4x9p3nw1j36qjxpjvdpi9wkca5gfd86y9q8939sv2"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/Crypt-UnixCrypt_XS")
(synopsis "XS interface for a portable traditional crypt function")
(description "@code{Crypt::UnixCrypt_XS} implements the DES-based
Unix @code{crypt} function. For those who need to construct
non-standard variants of @code{crypt}, the various building blocks
used in @code{crypt} are also supplied separately.")
;; Files in the 'fcrypt' directory are covered by a BSD licence.
(license (list perl-license bsd-3))))
(define-public perl-cwd-guard
(package
(name "perl-cwd-guard")
@ -3413,6 +3580,29 @@ (define-public perl-digest-hmac
interface for the RFC 2104 HMAC mechanism.")
(license (package-license perl))))
(define-public perl-digest-md4
(package
(name "perl-digest-md4")
(version "1.9")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/M/MI/MIKEM/DigestMD4/Digest-MD4-"
version ".tar.gz"))
(sha256
(base32
"19ma1hmvgiznq95ngzvm6v4dfxc9zmi69k8iyfcg6w14lfxi0lb6"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/Digest-MD4")
(synopsis "Interface to the MD4 Algorithm")
(description "The @code{Digest::MD4} module allows you to use the
RSA Data Security Inc.@: MD4 Message Digest algorithm from within Perl
programs. The algorithm takes as input a message of arbitrary length
and produces as output a 128-bit \"fingerprint\" or \"message digest\"
of the input. MD4 is described in RFC 1320.")
(license perl-license)))
(define-public perl-digest-md5
(package
(name "perl-digest-md5")

42
gnu/packages/python-xyz.scm
View file

@ -76,6 +76,7 @@
;;; Copyright © 2020 Alexandros Theodotou <alex@zrythm.org>
;;; Copyright © 2020 Lars-Dominik Braun <ldb@leibniz-psychology.org>
;;; Copyright © 2020 Alex ter Weele <alex.ter.weele@gmail.com>
;;; Copyright © 2020 Matthew Kraai <kraai@ftbfs.org>
;;;
;;; This file is part of GNU Guix.
;;;
@ -2268,14 +2269,14 @@ (define-public python2-pbr
(define-public python-pyrsistent
(package
(name "python-pyrsistent")
(version "0.15.7")
(version "0.16.0")
(home-page "https://github.com/tobgu/pyrsistent")
(source (origin
(method url-fetch)
(uri (pypi-uri "pyrsistent" version))
(sha256
(base32
"103j63g6lb5dfspph96zxjdpnq9h991kazd4f09ddgkpxpivbiyd"))))
"1lrsjgblnapfimd0alsi1as5nz2lfqv97131l7d6anbjzq2rjri8"))))
(build-system python-build-system)
(native-inputs
`(("python-hypothesis" ,python-hypothesis)
@ -11991,15 +11992,14 @@ (define-public python2-prompt-toolkit-1
(define-public python-jedi
(package
(name "python-jedi")
(version "0.16.0")
(version "0.17.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jedi" version))
(patches (search-patches "python-jedi-deleted-variables.patch"))
(sha256
(base32
"1mb5kmrk9bkc3kwzx02j62cdan1jqd92q1z7h7wi9d30jg5p3j6m"))))
"0c1h9x3a9klvk2g288wl328x8xgzw7136k6vs9hkd56b85vcjh6z"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -16358,14 +16358,14 @@ (define-public python-onetimepass
(define-public python-parso
(package
(name "python-parso")
(version "0.6.2")
(version "0.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "parso" version))
(sha256
(base32
"0mr1j4ijqnrihz1yap34g6i8vjldg5lz814sz4v0d8pbqvh5jmhc"))))
"0b7irps2dqmzq41sxbpvxbivhh1x2hwmbqp45bbpd82446p9z3lh"))))
(native-inputs
`(("python-pytest" ,python-pytest)))
(build-system python-build-system)
@ -18696,14 +18696,14 @@ (define-public python-k5test
(define-public python-gssapi
(package
(name "python-gssapi")
(version "1.6.1")
(version "1.6.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "gssapi" version))
(sha256
(base32
"1gymg4asvwrz7y13qpwp2s5g8qwq179d72gkj09q6bfcgs82l5wr"))))
"02i5s7998dg5kcr4m0xwamd8vjqk1816xbzldyp68l91f6bynwcr"))))
(build-system python-build-system)
(propagated-inputs
`(("python-decorator" ,python-decorator)
@ -19611,3 +19611,27 @@ (define-public python-click-plugins
register external CLI commands via setuptools entry-points.")
(home-page "https://github.com/click-contrib/click-plugins")
(license license:bsd-3)))
(define-public python-diceware
(package
(name "python-diceware")
(version "0.9.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "diceware" version))
(sha256
(base32
"0klb0ysybzlh2wihvir82hgq62v0jjmlcqklwajyms7c0p529yby"))))
(build-system python-build-system)
(native-inputs
`(("python-coverage" ,python-coverage)
("python-pytest" ,python-pytest)
("python-pytest-runner" ,python-pytest-runner)))
(home-page "https://github.com/ulif/diceware/")
(synopsis "Generates memorable passphrases")
(description "This package generates passphrases by concatenating words
randomly picked from wordlists. It supports several sources of
randomness (including real life dice) and different wordlists (including
cryptographically signed ones).")
(license license:gpl3+)))

21
gnu/packages/radio.scm
View file

@ -34,6 +34,7 @@ (define-module (gnu packages radio)
#:use-module (gnu packages boost)
#:use-module (gnu packages check)
#:use-module (gnu packages documentation)
#:use-module (gnu packages engineering)
#:use-module (gnu packages ghostscript)
#:use-module (gnu packages glib)
#:use-module (gnu packages gstreamer)
@ -243,7 +244,13 @@ (define-public gnuradio
(uri (string-append "https://www.gnuradio.org/releases/gnuradio/"
"gnuradio-" version ".tar.xz"))
(sha256
(base32 "0aw55gf5549b0fz2qdi7vplcmaf92bj34h40s34b2ycnqasv900r"))))
(base32 "0aw55gf5549b0fz2qdi7vplcmaf92bj34h40s34b2ycnqasv900r"))
(modules '((guix build utils)))
(snippet
'(begin
;; Delete bundled volk to use the shared one.
(delete-file-recursively "volk")
#t))))
(build-system cmake-build-system)
(native-inputs
`(("doxygen" ,doxygen)
@ -288,6 +295,7 @@ (define-public gnuradio
("python-pyyaml" ,python-pyyaml)
("qtbase" ,qtbase)
("qwt" ,qwt)
("volk" ,volk)
("zeromq" ,zeromq)))
(arguments
`(#:modules ((guix build cmake-build-system)
@ -298,6 +306,8 @@ (define-public gnuradio
#:imported-modules (,@%cmake-build-system-modules
(guix build glib-or-gtk-build-system)
(guix build python-build-system))
#:configure-flags
'("-DENABLE_INTERNAL_VOLK=OFF")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-paths
@ -383,7 +393,8 @@ (define-public gnuradio-osmosdr
("gnuradio" ,gnuradio)
("log4cpp" ,log4cpp)
;; TODO: Add more drivers.
("rtl-sdr" ,rtl-sdr)))
("rtl-sdr" ,rtl-sdr)
("volk" ,volk)))
(synopsis "GNU Radio block for interfacing with various radio hardware")
(description "This is a block for GNU Radio allowing to use a common API
to access different radio hardware.")
@ -462,7 +473,8 @@ (define-public gnuradio-iqbalance
("gmp" ,gmp)
("gnuradio" ,gnuradio)
("libosmo-dsp" ,libosmo-dsp)
("log4cpp" ,log4cpp)))
("log4cpp" ,log4cpp)
("volk" ,volk)))
(synopsis "GNU Radio block to correct IQ imbalance")
(description
"This is a GNU Radio block to correct IQ imbalance in quadrature
@ -504,7 +516,8 @@ (define-public gqrx
("portaudio" ,portaudio)
("pulseaudio" ,pulseaudio)
("qtbase" ,qtbase)
("qtsvg" ,qtsvg)))
("qtsvg" ,qtsvg)
("volk" ,volk)))
(arguments
`(#:tests? #f)) ; No tests
(synopsis "Software defined radio receiver")

4
gnu/packages/shells.scm
View file

@ -720,14 +720,14 @@ (define-public loksh
(define-public mksh
(package
(name "mksh")
(version "57")
(version "58")
(source
(origin
(method url-fetch)
(uri (string-append "https://www.mirbsd.org/MirOS/dist/mir/mksh/mksh-R"
version ".tgz"))
(sha256
(base32 "0xdykm1z710wriwd6nc8s8lwk2dwjl63dq96xxaawlid31a1241x"))))
(base32 "1337zjvzh14yncg9igdry904a3ns52l8rnm1kcq262w7f5xyp2v0"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; tests require access to /dev/tty

81
gnu/packages/statistics.scm
View file

@ -590,13 +590,13 @@ (define-public r-matrix
(define-public r-nlme
(package
(name "r-nlme")
(version "3.1-145")
(version "3.1-147")
(source
(origin
(method url-fetch)
(uri (cran-uri "nlme" version))
(sha256
(base32 "1i9a3afdmn2ziks0imz0j09ay9n0zb9mhrymy9mg97vvlz5diwrh"))))
(base32 "1rqc3wy3lmy0wczsvsn8yszzsxhppfwg4iznb1j6ki2qawpdij7g"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lattice" ,r-lattice)))
@ -693,14 +693,14 @@ (define-public r-spatial
(define-public r-survival
(package
(name "r-survival")
(version "3.1-11")
(version "3.1-12")
(source
(origin
(method url-fetch)
(uri (cran-uri "survival" version))
(sha256
(base32
"1fbhbm3bnpg1nmj37h1d76x813ggvwk0cp51ixmmgb3pz47i5xj4"))))
"07zj3gpwncw89hbiwjb6ih9axv5zwdqnbgz9yw9xzws6nrpdcbmn"))))
(build-system r-build-system)
(propagated-inputs
`(("r-matrix" ,r-matrix)))
@ -1066,13 +1066,13 @@ (define-public r-stringr
(define-public r-reshape2
(package
(name "r-reshape2")
(version "1.4.3")
(version "1.4.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "reshape2" version))
(sha256
(base32 "03ki5ka1dj208fc0dclbm0b4xp9d769pah2j9cs34l776p4r9zwa"))))
(base32 "1n0jrajpvc8hjkh9z4g8bwq63qy5vy5cgl2pzjardyih4ngcz3fq"))))
(build-system r-build-system)
(propagated-inputs
`(("r-plyr" ,r-plyr)
@ -1148,14 +1148,14 @@ (define-public r-ggdendro
(define-public r-gdtools
(package
(name "r-gdtools")
(version "0.2.1")
(version "0.2.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "gdtools" version))
(sha256
(base32
"1aax50wyrs4336zpf247l8wmp4spab2n70msziy1ip4gbjn26wa1"))))
"08njzin0c6biw62j5w30r9j85vr1m2cg4hmv5d76nym860yrlqjf"))))
(build-system r-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
@ -1989,14 +1989,14 @@ (define-public r-ade4
(define-public r-xml2
(package
(name "r-xml2")
(version "1.3.0")
(version "1.3.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "xml2" version))
(sha256
(base32
"138v9374xwc7flw8fz8qp8q3w4fch2jviij0g10dg92xn9dsyani"))))
"0r7rxp922785dcryghbb3wxqgdav7mafwnmxjqfx8zaj3v1q2j3z"))))
(build-system r-build-system)
(inputs
`(("libxml2" ,libxml2)
@ -2080,14 +2080,14 @@ (define-public r-whisker
(define-public r-backports
(package
(name "r-backports")
(version "1.1.5")
(version "1.1.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "backports" version))
(sha256
(base32
"0k19w68b2aihyj5mflw3732gkkzs78sssqdns960pdw3yfnkiv33"))))
"170rphqq28j0pcr28g6dxv3isp436ajhyzkpri31pn0lfm3szs6h"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/backports")
(synopsis "Reimplementations of functions introduced since R 3.0.0")
@ -2401,13 +2401,13 @@ (define-public r-rstudioapi
(define-public r-devtools
(package
(name "r-devtools")
(version "2.2.2")
(version "2.3.0")
(source (origin
(method url-fetch)
(uri (cran-uri "devtools" version))
(sha256
(base32
"1bhb2j8ilpdzwd0c678mcgfpdw88vncsjma79afcikxmzcsz9279"))))
"1l6w765q180bg5mmdq5k2ymf6apz7ldhnknzf6ynfp1kf70pbhsg"))))
(build-system r-build-system)
(propagated-inputs
`(("r-callr" ,r-callr)
@ -2435,6 +2435,8 @@ (define-public r-devtools
("r-testthat" ,r-testthat)
("r-usethis" ,r-usethis)
("r-withr" ,r-withr)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/hadley/devtools")
(synopsis "Tools to make developing R packages easier")
(description "The devtools package is a collection of package development
@ -2573,21 +2575,15 @@ (define-public r-latticeextra
(define-public r-rcpparmadillo
(package
(name "r-rcpparmadillo")
(version "0.9.850.1.0")
(version "0.9.860.2.0")
(source (origin
(method url-fetch)
(uri (cran-uri "RcppArmadillo" version))
(sha256
(base32
"0q9clhmbwwph47hrhx5827m7njrcl2klihyqbkf0ihwlbqrjijwz"))))
"1rg9ak0zbv8d9cyj10jq52nrcbk1pvfz28kbkhpx79mpjhrl7pb5"))))
(properties `((upstream-name . "RcppArmadillo")))
(build-system r-build-system)
;; All needed for vignettes
(native-inputs
`(("r-knitr" ,r-knitr)
("r-rmarkdown" ,r-rmarkdown)
("ghc-pandoc" ,ghc-pandoc)
("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc)))
(propagated-inputs
`(("r-rcpp" ,r-rcpp)))
(home-page "https://github.com/RcppCore/RcppArmadillo")
@ -3769,13 +3765,13 @@ (define-public r-purrr
(define-public r-plotly
(package
(name "r-plotly")
(version "4.9.2")
(version "4.9.2.1")
(source (origin
(method url-fetch)
(uri (cran-uri "plotly" version))
(sha256
(base32
"19zw3qnhfgqdxlvma8xyikir46aiqhfcwxf072z9xgq0hknpblm5"))))
"1f0x83a2s7200iqi6gpngijks06fcvcbm6701d5r5rxpb8rawppl"))))
(build-system r-build-system)
(propagated-inputs
`(("r-base64enc" ,r-base64enc)
@ -4101,14 +4097,14 @@ (define-public r-fastcluster
(define-public r-sfsmisc
(package
(name "r-sfsmisc")
(version "1.1-5")
(version "1.1-6")
(source
(origin
(method url-fetch)
(uri (cran-uri "sfsmisc" version))
(sha256
(base32
"173qgm2bn84x544fc3x9gc2rv995sbsvji9lnn2drx8drvzyy8lf"))))
"04fvjdab6vyyghyqy0abxvfbyr1myz6yib7ibwiyjw9yf7fjrcjp"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/sfsmisc")
(synopsis "Utilities from \"Seminar fuer Statistik\" ETH Zurich")
@ -4695,17 +4691,18 @@ (define-public r-flexmix
(define-public r-mclust
(package
(name "r-mclust")
(version "5.4.5")
(version "5.4.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "mclust" version))
(sha256
(base32
"0whandnda1fnjn5k3hgxdbp3b0xr7nlzy1j37saqb536h8q9dwkm"))))
"1z46qask09x3xpv0wzvhn09218vwyrip4f5jrhnx96khpwvczzyl"))))
(build-system r-build-system)
(native-inputs
`(("gfortran" ,gfortran)))
`(("gfortran" ,gfortran)
("r-knitr" ,r-knitr)))
(home-page "https://www.stat.washington.edu/mclust/")
(synopsis "Gaussian mixture modelling for model-based clustering etc.")
(description
@ -5137,14 +5134,14 @@ (define-public r-nloptr
(define-public r-lme4
(package
(name "r-lme4")
(version "1.1-21")
(version "1.1-23")
(source
(origin
(method url-fetch)
(uri (cran-uri "lme4" version))
(sha256
(base32
"035j2hqkwv939xl07pm2vykvf3wlx8qj317846n9pkpqkyv58mbz"))))
"0qh29kqli0l3naylgb6jha6jllx4nwryr3hv9yk37blgyyql5mcr"))))
(build-system r-build-system)
(propagated-inputs
`(("r-boot" ,r-boot)
@ -5155,7 +5152,10 @@ (define-public r-lme4
("r-nloptr" ,r-nloptr)
("r-nlme" ,r-nlme)
("r-rcpp" ,r-rcpp)
("r-rcppeigen" ,r-rcppeigen)))
("r-rcppeigen" ,r-rcppeigen)
("r-statmod" ,r-statmod)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://cran.r-project.org/web/packages/lme4")
(synopsis "Linear mixed-effects models using eigen and S4")
(description
@ -5403,14 +5403,14 @@ (define-public r-tsne
(define-public r-cairo
(package
(name "r-cairo")
(version "1.5-11")
(version "1.5-12")
(source
(origin
(method url-fetch)
(uri (cran-uri "Cairo" version))
(sha256
(base32
"1k9kpxcg5n4g6x2gydv344f4w0snqbhww14fnbbj1bny0mmv28xg"))))
"02v29am4fac3fyq6y1w6r89zwbqqkxjsxrafcwb5s124ikxyl22f"))))
(properties `((upstream-name . "Cairo")))
(build-system r-build-system)
(inputs
@ -5439,20 +5439,21 @@ (define-public r-cairo
(define-public r-lubridate
(package
(name "r-lubridate")
(version "1.7.4")
(version "1.7.8")
(source
(origin
(method url-fetch)
(uri (cran-uri "lubridate" version))
(sha256
(base32
"14a823il77w3wmmnzr89vwrqp50y56dh5raycnaw6c8nv5xsh32i"))))
"0g2m9dyhgds4shdrk76w7rqdl9msam4rii2qrhz12gipzhi9k89x"))))
(build-system r-build-system)
(propagated-inputs
`(("r-rcpp" ,r-rcpp)
("r-stringr" ,r-stringr)))
(home-page
"https://cran.r-project.org/web/packages/lubridate")
`(("r-generics" ,r-generics)
("r-rcpp" ,r-rcpp)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://cran.r-project.org/web/packages/lubridate/")
(synopsis "Make dealing with dates a little easier")
(description
"This package provides functions to work with date-times and time-spans:

10
gnu/packages/version-control.scm
View file

@ -152,14 +152,14 @@ (define git-cross-configure-flags
(define-public git
(package
(name "git")
(version "2.26.0")
(version "2.26.1")
(source (origin
(method url-fetch)
(uri (string-append "mirror://kernel.org/software/scm/git/git-"
version ".tar.xz"))
(sha256
(base32
"1mlmwibfgcv42c28fxmbd3iim8fc06r17dljd8vdgq550z5hvkly"))))
"0s03ix9j1h0yychkh1l1cgpr1l9lwzn3rprl08rk8ii5ix02i0l8"))))
(build-system gnu-build-system)
(native-inputs
`(("native-perl" ,perl)
@ -176,7 +176,7 @@ (define-public git
version ".tar.xz"))
(sha256
(base32
"09ilv5gg7167mwc0qqw2fz3lmdm360crnxc0xzkqn53wnsh4cziq"))))
"0j2031x3qchwjmiy2h849j4x1vd8y4rgqv2ak9dc87xbbpsbfg59"))))
;; For subtree documentation.
("asciidoc" ,asciidoc-py3)
("docbook-xsl" ,docbook-xsl)
@ -892,9 +892,9 @@ (define (quoted-file-name input path)
(method url-fetch)
;; cgit is tightly bound to git. Use GIT_VER from the Makefile,
;; which may not match the current (package-version git).
(uri "mirror://kernel.org/software/scm/git/git-2.25.1.tar.xz")
(uri "mirror://kernel.org/software/scm/git/git-2.25.3.tar.xz")
(sha256
(base32 "09lzwa183nblr6l8ib35g2xrjf9wm9yhk3szfvyzkwivdv69c9r2"))))
(base32 "0yvr97cl0dvj3fwblq1mb0cp97v8hrn9l98p8b1jx8815mbsnz9h"))))
("openssl" ,openssl)
("groff" ,groff)
("python" ,python)

23
gnu/packages/video.scm
View file

@ -602,7 +602,7 @@ (define-public straw-viewer
(define-public x265
(package
(name "x265")
(version "3.2.1")
(version "3.3")
(outputs '("out" "static"))
(source
(origin
@ -612,7 +612,7 @@ (define-public x265
(string-append "https://download.videolan.org/videolan/x265/"
"x265_" version ".tar.gz")))
(sha256
(base32 "1k5vijsy6cgcghw69f5275xfmbjjx7js0nlbgxbd6krnjb7sv6zv"))
(base32 "170b61cgpcs5n35qps0p40dqs1q81vkgagzbs4zv7pzls6718vpj"))
(patches (search-patches "x265-arm-flags.patch"))
(modules '((guix build utils)))
(snippet '(begin
@ -1622,25 +1622,6 @@ (define-public libvpx
(license license:bsd-3)
(home-page "https://www.webmproject.org/")))
;; GNU IceCat fails to build against 1.8.0, so keep this version for now.
(define-public libvpx-1.7
(package
(inherit libvpx)
(version "1.7.0")
(source (origin
(inherit (package-source libvpx))
(uri (git-reference
(url "https://chromium.googlesource.com/webm/libvpx")
(commit (string-append "v" version))))
(file-name (git-file-name "libvpx" version))
(sha256
(base32
"0vvh89hvp8qg9an9vcmwb7d9k3nixhxaz6zi65qdjnd0i56kkcz6"))
(patches
(append
(origin-patches (package-source libvpx))
(search-patches "libvpx-use-after-free-in-postproc.patch")))))))
(define-public youtube-dl
(package
(name "youtube-dl")

21
gnu/packages/virtualization.scm
View file

@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2020 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015, 2016, 2017, 2018 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016, 2017, 2018. 2019 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
@ -133,6 +133,12 @@ (define-public qemu
`(;; Running tests in parallel can occasionally lead to failures, like:
;; boot_sector_test: assertion failed (signature == SIGNATURE): (0x00000000 == 0x0000dead)
#:parallel-tests? #f
;; FIXME: Disable tests on i686 to work around
;; <https://bugs.gnu.org/40527>.
#:tests? ,(or (%current-target-system)
(not (string=? "i686-linux" (%current-system))))
#:configure-flags (list "--enable-usb-redir" "--enable-opengl"
"--enable-docs"
(string-append "--smbd="
@ -1177,7 +1183,7 @@ (define-public bochs
(define-public xen
(package
(name "xen")
(version "4.11.1")
(version "4.13.0")
(source (origin
(method git-fetch)
(uri (git-reference
@ -1186,7 +1192,7 @@ (define-public xen
(file-name (git-file-name name version))
(sha256
(base32
"1wv1hyfii14vi9lfjmnv07h2gpm3b7kvh2p55f4yy2b40simksgk"))))
"0py50n995gv909i0d1lfdcj9wcp5g1d5z6m2291jqqlfyany138g"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
@ -1300,14 +1306,13 @@ (define (filter-environment! filter-predicate
new-search-path ":")))
(setenv env-name new-env-value)))
environment-variable-names))
(setenv "CROSS_C_INCLUDE_PATH" (getenv "C_INCLUDE_PATH"))
(setenv "CROSS_CPLUS_INCLUDE_PATH" (getenv "CPLUS_INCLUDE_PATH"))
(setenv "CROSS_CPATH" (getenv "CPATH"))
(setenv "CROSS_LIBRARY_PATH" (getenv "LIBRARY_PATH"))
(filter-environment! cross?
'("CROSS_C_INCLUDE_PATH" "CROSS_CPLUS_INCLUDE_PATH"
'("CROSS_CPATH"
"CROSS_LIBRARY_PATH"))
(filter-environment! (lambda (e) (not (cross? e)))
'("C_INCLUDE_PATH" "CPLUS_INCLUDE_PATH"
'("CPATH"
"LIBRARY_PATH"))
;; Guix tries to be helpful and automatically adds
;; mini-os-git-checkout/include to the include path,
@ -1316,7 +1321,7 @@ (define (filter-environment! filter-predicate
(not
(string-contains e
"mini-os-git-checkout")))
'("C_INCLUDE_PATH" "CPLUS_INCLUDE_PATH"
'("CPATH"
"LIBRARY_PATH"))
(setenv "EFI_VENDOR" "guix")
#t))

6
gnu/packages/webkit.scm
View file

@ -2,7 +2,7 @@
;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com>
;;; Copyright © 2015 David Hashe <david.hashe@dhashe.com>
;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016, 2017, 2018, 2019 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Pierre Neidhardt <mail@ambrevar.xyz>
;;; Copyright © 2019 Marius Bakke <mbakke@fastmail.com>
@ -121,14 +121,14 @@ (define-public wpebackend-fdo
(define-public webkitgtk
(package
(name "webkitgtk")
(version "2.28.0")
(version "2.28.1")
(source (origin
(method url-fetch)
(uri (string-append "https://www.webkitgtk.org/releases/"
"webkitgtk-" version ".tar.xz"))
(sha256
(base32
"12qfs9w93c5kiyi14ynm4rf4ad3c213dvzmdrc9c3ab2iwbks7rn"))))
"1n7k4yriqhr38f4fgy8pzdn1nm60m53z8p478sgg64swxnijdg5c"))))
(build-system cmake-build-system)
(outputs '("out" "doc"))
(arguments

1
gnu/services/linux.scm
View file

@ -142,7 +142,6 @@ (define kernel-module-loader-shepherd-service
(documentation "Load kernel modules.")
(provision '(kernel-module-loader))
(requirement '(file-systems))
(respawn? #f)
(one-shot? #t)
(modules `((srfi srfi-1)
(srfi srfi-34)

7
gnu/services/shepherd.scm
View file

@ -291,6 +291,13 @@ (define config
(default-environment-variables
'("PATH=/run/current-system/profile/bin"))
;; Booting off a DVD, especially on a slow machine, can make
;; everything slow. Thus, increase the timeout compared to the
;; default 5s in the Shepherd 0.7.0. See
;; <https://bugs.gnu.org/40572>.
;; XXX: Use something better when the next Shepherd is out.
(set! (@@ (shepherd service) %pid-file-timeout) 30)
;; Arrange to spawn a REPL if something goes wrong. This is better
;; than a kernel panic.
(call-with-error-handling

43
gnu/system/install.scm
View file

@ -4,6 +4,7 @@
;;; Copyright © 2016 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2017, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2020 Florian Pelz <pelzflorian@pelzflorian.de>
;;;
;;; This file is part of GNU Guix.
;;;
@ -27,6 +28,7 @@ (define-module (gnu system install)
#:use-module (guix gexp)
#:use-module (guix store)
#:use-module (guix monads)
#:use-module (guix modules)
#:use-module ((guix packages) #:select (package-version))
#:use-module ((guix store) #:select (%store-prefix))
#:use-module (gnu installer)
@ -50,6 +52,7 @@ (define-module (gnu system install)
#:use-module (gnu packages texinfo)
#:use-module (gnu packages compression)
#:use-module (gnu packages nvi)
#:use-module (gnu packages xorg)
#:use-module (ice-9 match)
#:use-module (srfi srfi-26)
#:export (installation-os
@ -287,6 +290,38 @@ (define %nscd-minimal-caches
(persistent? #f)
(max-database-size (* 5 (expt 2 20)))))) ;5 MiB
;; These define a service to load the uvesafb kernel module with the
;; appropriate options. The GUI installer needs it when the machine does not
;; support Kernel Mode Setting. Otherwise kmscon is missing /dev/fb0.
(define (uvesafb-shepherd-service _)
(list (shepherd-service
(documentation "Load the uvesafb kernel module.")
(provision '(uvesafb))
(requirement '(file-systems))
(start #~(lambda ()
;; uvesafb is only supported on x86 and x86_64.
(or (not (and (string-suffix? "linux-gnu" %host-type)
(or (string-prefix? "x86_64" %host-type)
(string-prefix? "i686" %host-type))))
(file-exists? "/dev/fb0")
(invoke #+(file-append kmod "/bin/modprobe")
"uvesafb"
(string-append "v86d=" #$v86d "/sbin/v86d")
"mode_option=1024x768"))))
(respawn? #f)
(one-shot? #t))))
(define uvesafb-service-type
(service-type
(name 'uvesafb)
(extensions
(list (service-extension shepherd-root-service-type
uvesafb-shepherd-service)))
(description
"Load the @code{uvesafb} kernel module with the right options.")
(default-value #t)))
(define %installation-services
;; List of services of the installation system.
(let ((motd (plain-file "motd" "
@ -407,7 +442,13 @@ (define bare-bones-os
(list bare-bones-os
glibc-utf8-locales
texinfo
guile-2.2)))))
guile-2.2))
;; Machines without Kernel Mode Setting (those with many old and
;; current AMD GPUs, SiS GPUs, ...) need uvesafb to show the GUI
;; installer. Some may also need a kernel parameter like nomodeset
;; or vga=793, but we leave that for the user to specify in GRUB.
(service uvesafb-service-type))))
(define %issue
;; Greeting.

5
guix/scripts/weather.scm
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@ -339,8 +339,9 @@ (define (load-manifest file)
"Load the manifest from FILE and return the list of packages it refers to."
(let* ((user-module (make-user-module '((guix profiles) (gnu))))
(manifest (load* file user-module)))
(map manifest-entry-item
(manifest-transitive-entries manifest))))
(delete-duplicates (map manifest-entry-item
(manifest-transitive-entries manifest))
eq?)))
;;;

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