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gnu: edirect: Add bash-minimal to inputs.

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* gnu/packages/bioinformatics.scm (edirect): Delete trailing #t.
[inputs]: Add bash-minimal.

Change-Id: I28474c3ec5866b5e9f824d5d71e6cc8be5791f58
This commit is contained in:
Maxim Cournoyer 2023-10-20 01:04:49 -04:00 committed by Ludovic Courtès
parent 2efe24adc0
commit bff03561c4
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GPG key ID: 090B11993D9AEBB5
1 changed files with 7 additions and 11 deletions
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18
gnu/packages/bioinformatics.scm
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@ -6467,8 +6467,7 @@ (define-public edirect
(substitute* "rchive.go"
;; This go library does not have any license.
(("github.com/fiam/gounidecode/unidecode")
"golang.org/rainycape/unidecode"))
#t))))
"golang.org/rainycape/unidecode"))))))
(build-system perl-build-system)
(arguments
`(#:phases
@ -6481,8 +6480,7 @@ (define-public edirect
;; Ignore errors about missing xtract.Linux and rchive.Linux.
(substitute* "pm-refresh"
(("cat \\\"\\$target")
"grep ^[[:digit:]] \"$target"))
#t))
"grep ^[[:digit:]] \"$target"))))
(replace 'install
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((bin (string-append (assoc-ref outputs "out") "/bin"))
@ -6498,8 +6496,7 @@ (define-public edirect
(symlink (string-append edirect-go "/bin/xtract.Linux")
(string-append bin "/xtract"))
(symlink (string-append edirect-go "/bin/rchive.Linux")
(string-append bin "/rchive")))
#t))
(string-append bin "/rchive")))))
(add-after 'install 'wrap-program
(lambda* (#:key outputs #:allow-other-keys)
;; Make sure everything can run in a pure environment.
@ -6516,16 +6513,15 @@ (define-public edirect
,(dirname (which "grep"))
,(dirname (which "perl"))
,(dirname (which "uname"))))))
(find-files out ".")))
#t))
(find-files out ".")))))
(add-after 'wrap-program 'check
(lambda* (#:key outputs #:allow-other-keys)
(invoke (string-append (assoc-ref outputs "out")
"/bin/edirect.pl")
"-filter" "-help")
#t)))))
"-filter" "-help"))))))
(inputs
(list edirect-go-programs
(list bash-minimal
edirect-go-programs
perl-html-parser
perl-encode-locale
perl-file-listing