mirror of
https://git.in.rschanz.org/ryan77627/guix.git
synced 2024-12-24 05:18:07 -05:00
gnu: Add python-pymc.
* gnu/packages/statistics.scm (python-pymc): New variable.
This commit is contained in:
parent
cbcab52fd1
commit
c55611ff3f
1 changed files with 57 additions and 0 deletions
|
@ -2173,6 +2173,63 @@ (define-public python-arviz
|
|||
comparison and diagnostics.")
|
||||
(license license:asl2.0)))
|
||||
|
||||
(define-public python-pymc
|
||||
(package
|
||||
(name "python-pymc")
|
||||
(version "5.5.0")
|
||||
(source (origin
|
||||
(method git-fetch) ; no tests in PyPI
|
||||
(uri (git-reference
|
||||
(url "https://github.com/pymc-devs/pymc")
|
||||
(commit (string-append "v" version))))
|
||||
(file-name (git-file-name name version))
|
||||
(sha256
|
||||
(base32
|
||||
"077xigv3lfcn9fqc14rsnam4v95fmqk2wpzfrgj08vg8m7f69wdj"))))
|
||||
(build-system pyproject-build-system)
|
||||
(arguments
|
||||
(list #:tests? #f ; tests are too computationally intensive
|
||||
#:phases #~(modify-phases %standard-phases
|
||||
(add-after 'unpack 'versioneer
|
||||
(lambda _
|
||||
(with-output-to-file "setup.cfg"
|
||||
(lambda ()
|
||||
(display "\
|
||||
[versioneer]
|
||||
VCS = git
|
||||
style = pep440
|
||||
versionfile_source = pymc/_version.py
|
||||
versionfile_build = pymc/_version.py
|
||||
tag_prefix =
|
||||
parentdir_prefix = pymc-
|
||||
")))
|
||||
(invoke "versioneer" "install")
|
||||
(substitute* "setup.py"
|
||||
(("versioneer.get_version\\(\\)")
|
||||
(string-append "\"" #$version "\"")))))
|
||||
;; To create the compiledir for tests.
|
||||
(add-before 'check 'write-permissions
|
||||
(lambda* (#:key tests? #:allow-other-keys)
|
||||
(when tests?
|
||||
(setenv "HOME" "/tmp")))))))
|
||||
(native-inputs (list python-pytest-cov python-versioneer))
|
||||
(propagated-inputs (list python-arviz
|
||||
python-cachetools
|
||||
python-cloudpickle
|
||||
python-fastprogress
|
||||
python-numpy
|
||||
python-pandas
|
||||
python-pytensor
|
||||
python-scipy
|
||||
python-typing-extensions))
|
||||
(home-page "https://github.com/pymc-devs/pymc")
|
||||
(synopsis "Library for probabilistic programming in Python")
|
||||
(description
|
||||
"PyMC (formerly PyMC3) is a Python package for Bayesian statistical
|
||||
modeling focusing on advanced Markov chain Monte Carlo (MCMC) and variational
|
||||
inference (VI) algorithms.")
|
||||
(license license:asl2.0)))
|
||||
|
||||
(define-public python-patsy
|
||||
(package
|
||||
(name "python-patsy")
|
||||
|
|
Loading…
Reference in a new issue