ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2024-12-24 21:38:07 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions

gnu: Add mia.

Browse source 
* gnu/packages/image-processing.scm (mia): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
This commit is contained in:
John Darrington 2017-03-15 21:05:23 +01:00 committed by Ricardo Wurmus
parent 7fe4e556c0
commit cdb2a21160
No known key found for this signature in database
GPG key ID: 197A5888235FACAC
1 changed files with 66 additions and 1 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

67
gnu/packages/image-processing.scm
View file

@ -22,12 +22,23 @@ (define-module (gnu packages image-processing)
#:use-module (guix packages)
#:use-module (guix utils)
#:use-module (guix download)
#:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
#:use-module (gnu packages)
#:use-module (gnu packages algebra)
#:use-module (gnu packages boost)
#:use-module (gnu packages compression)
#:use-module (gnu packages documentation)
#:use-module (gnu packages gnome)
#:use-module (gnu packages graphics)
#:use-module (gnu packages graphviz)
#:use-module (gnu packages image)
#:use-module (gnu packages perl))
#:use-module (gnu packages maths)
#:use-module (gnu packages perl)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages xml)
#:use-module (gnu packages vtk))
;; We use the latest snapshot of this package because the latest release is
;; from 2011 and has known vulnerabilities that cannot easily be fixed by
@ -63,3 +74,57 @@ (define-public dcmtk
"file://COPYRIGHT"
"A union of the Apache 2.0 licence and various non-copyleft
licences similar to the Modified BSD licence."))))
(define-public mia
(package
(name "mia")
(version "2.4.4")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/mia/mia/"
(version-major+minor version)
"/mia-" version ".tar.xz"))
(sha256
(base32
"124gvf8nkls59mlnx8ynq00n9zrah7a54gsywafx7qmfr0y95ra7"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags
(list "-DMIA_CREATE_NIPYPE_INTERFACES=0"
(string-append "-DCMAKE_INSTALL_LIBDIR="
(assoc-ref %outputs "out") "/lib")
"-DCMAKE_CXX_FLAGS=-fpermissive")))
(inputs
`(("boost" ,boost)
("dcmtk" ,dcmtk)
("doxygen" ,doxygen)
("eigen" ,eigen)
("fftw" ,fftw)
("fftwf" ,fftwf)
("gsl" ,gsl)
("gts" ,gts)
("hdf5" ,hdf5)
("itpp" ,itpp)
("libjpeg" ,libjpeg)
("libpng" ,libpng)
("libtiff" ,libtiff)
("libxml" ,libxml2)
("libxml++" ,libxml++)
("maxflow" ,maxflow)
("niftilib" ,niftilib)
("nlopt" ,nlopt)
("openexr" ,openexr)
("python-lxml" ,python2-lxml)
("vtk" ,vtk)))
(native-inputs
`(("pkg-config" ,pkg-config)
("python" ,python-2)))
(home-page "http://mia.sourceforge.net")
(synopsis "Toolkit for gray scale medical image analysis")
(description "MIA provides a combination of command line tools, plug-ins,
and libraries that make it possible run image processing tasks interactively
in a command shell and to prototype using the shell's scripting language. It
is built around a plug-in structure that makes it easy to add functionality
without compromising the original code base and it makes use of a wide variety
of external libraries that provide additional functionality.")
(license license:gpl3+)))