gnu: Add r-scseqcomm.

* gnu/packages/bioinformatics.scm (r-scseqcomm): New variable.
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zimoun 2022-01-18 18:54:18 +01:00 committed by Ricardo Wurmus
parent dac6b53c7e
commit ce291b193c
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@ -7910,6 +7910,56 @@ (define-public r-misha
analyze genomic data resulting from various experiments.")
(license license:gpl2)))
(define-public r-scseqcomm
(let ((commit "01076e703999f1a5aa76419d821b50aebe2b777a")
(revision "0"))
(package
(name "r-scseqcomm")
(version (git-version "0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://gitlab.com/sysbiobig/scseqcomm")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1fw5si47d6agnz5fibmp2b1sv08pbpwv1j71w57xbav9044i032q"))
;; Delete bundled dependency.
(modules '((guix build utils)))
(snippet
'(delete-file-recursively "other_deps"))))
(build-system r-build-system)
(inputs
(list r-add2ggplot
r-chorddiag
r-doparallel
r-dplyr
r-foreach
;;r-grid ;; listed in DESCRIPTION
r-gridextra
r-ggplot2
r-gtable
r-htmlwidgets
r-igraph
r-matrix
;;r-methods ;; listed in DESCRIPTION
r-org-hs-eg-db
r-psych
r-rcolorbrewer
r-rlang
r-scico
r-tidygraph
r-topgo))
(native-inputs
(list r-knitr))
(home-page "https://gitlab.com/sysbiobig/scseqcomm")
(synopsis "Inter- and intra- cellular signaling from single cell RNA-seq")
(description "This package is tools for analysing intercellular and
intracellular signaling from single cell RNA-seq (scRNA-seq) data.")
(license license:gpl3))))
(define-public r-shaman
(let ((commit "d6944e8ac7bd1dbd5c6cec646eafc1d19d0ca96f")
(release "2.0")