diff --git a/gnu-system.am b/gnu-system.am index 6934c92681..91e5e521f8 100644 --- a/gnu-system.am +++ b/gnu-system.am @@ -462,6 +462,7 @@ dist_patch_DATA = \ gnu/packages/patches/gtkglext-disable-disable-deprecated.patch \ gnu/packages/patches/hop-bigloo-4.0b.patch \ gnu/packages/patches/hop-linker-flags.patch \ + gnu/packages/patches/hwloc-gather-topology-lstopo.patch \ gnu/packages/patches/hydra-automake-1.15.patch \ gnu/packages/patches/hydra-disable-darcs-test.patch \ gnu/packages/patches/irrlicht-mesa-10.patch \ diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm index 8e62da9701..0e1016e00f 100644 --- a/gnu/packages/mpi.scm +++ b/gnu/packages/mpi.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2014 Eric Bavier +;;; Copyright © 2014, 2015 Eric Bavier ;;; Copyright © 2014 Ludovic Courtès ;;; Copyright © 2014 Ian Denhardt ;;; @@ -39,30 +39,29 @@ (define-module (gnu packages mpi) (define-public hwloc (package (name "hwloc") - (version "1.9") + (version "1.10.1") (source (origin (method url-fetch) (uri (string-append "http://www.open-mpi.org/software/hwloc/v" - version "/downloads/hwloc-" - version ".tar.bz2")) + (version-major+minor version) + "/downloads/hwloc-" version ".tar.bz2")) (sha256 (base32 - "0zjgiili2a8v63s8ly3a8qp8ibxv1jw3zbgm7diic3w1qgqiza14")))) + "0jji5rphy05s0lp6bknn8lxwixrq0hy5rjzsqvhjszbkl2li7kim")) + (patches (list + (search-patch "hwloc-gather-topology-lstopo.patch"))))) (build-system gnu-build-system) - (arguments - ;; Enable libpci support, which effectively makes hwloc GPLv2+. - '(#:configure-flags '("--enable-libpci"))) (inputs `(("libx11" ,libx11) ("cairo" ,cairo) ("ncurses" ,ncurses) + ("libpciaccess" ,libpciaccess) ("expat" ,expat))) (native-inputs `(("pkg-config" ,pkg-config))) (propagated-inputs - ;; 'hwloc.pc' refers to libpci and libnuma, hence the propagation. - `(("numactl" ,numactl) - ("pciutils" ,pciutils))) + ;; 'hwloc.pc' refers to libnuma, hence the propagation. + `(("numactl" ,numactl))) (home-page "http://www.open-mpi.org/projects/hwloc/") (synopsis "Abstraction of hardware architectures") (description @@ -77,8 +76,6 @@ (define-public hwloc hwloc may display the topology in multiple convenient formats. It also offers a powerful programming interface to gather information about the hardware, bind processes, and much more.") - - ;; But see above about linking against libpci. (license bsd-3))) (define-public openmpi diff --git a/gnu/packages/patches/hwloc-gather-topology-lstopo.patch b/gnu/packages/patches/hwloc-gather-topology-lstopo.patch new file mode 100644 index 0000000000..06f47aecaa --- /dev/null +++ b/gnu/packages/patches/hwloc-gather-topology-lstopo.patch @@ -0,0 +1,13 @@ +Derived from upstream commit 0a32f719c. + +--- hwloc-1.10.1/tests/linux/Makefile.in 2015-01-26 03:37:52.000000000 -0600 ++++ hwloc-1.10.1/tests/linux/Makefile.in 2015-06-15 11:21:49.824842511 -0500 +@@ -1633,7 +1633,7 @@ + + + install-exec-hook: +- $(SED) -e 's/HWLOC_top_builddir\/utils/bindir/' -e '/HWLOC_top_builddir/d' $(DESTDIR)$(bindir)/hwloc-gather-topology > $(DESTDIR)$(bindir)/hwloc-gather-topology.tmp && mv -f $(DESTDIR)$(bindir)/hwloc-gather-topology.tmp $(DESTDIR)$(bindir)/hwloc-gather-topology ++ $(SED) -e 's/HWLOC_top_builddir\/utils\/lstopo/bindir/' -e '/HWLOC_top_builddir/d' $(DESTDIR)$(bindir)/hwloc-gather-topology > $(DESTDIR)$(bindir)/hwloc-gather-topology.tmp && mv -f $(DESTDIR)$(bindir)/hwloc-gather-topology.tmp $(DESTDIR)$(bindir)/hwloc-gather-topology + chmod +x $(DESTDIR)$(bindir)/hwloc-gather-topology + + # Tell versions [3.59,3.63) of GNU make to not export all variables.