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gnu: python-anndata: Fetch sources from git.

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* gnu/packages/python-xyz.scm (python-anndata)[source]: Fetch from git to
include test data.
[arguments]: Enable tests.  Do not let setuptools_scm guess the version.
This commit is contained in:
Ricardo Wurmus 2021-08-30 18:26:14 +02:00
parent b105655670
commit d3364b9c37
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GPG key ID: 197A5888235FACAC
1 changed files with 9 additions and 5 deletions
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14
gnu/packages/python-xyz.scm
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@ -21386,15 +21386,18 @@ (define-public python-anndata
(version "0.7.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "anndata" version))
;; The tarball from PyPi doesn't include tests.
(method git-fetch)
(uri (git-reference
(url "https://github.com/theislab/anndata")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1ch8yp0xmag6z0kl01pljm35lbbwax7lrimfhiclpkd4m6xngk53"))))
"1q30bsfsq9xfqm8nmabg3bjh9gix3yng0170xiiyw1lin4xncf0q"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; The tarball from PyPi doesn't include tests.
#:phases
`(#:phases
(modify-phases %standard-phases
(delete 'check)
(add-before 'build 'relax-dependency-requirements
@ -21405,6 +21408,7 @@ (define-public python-anndata
(("pandas>=1.1.1") "pandas>=1.0.5"))))
(replace 'build
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" ,version)
;; ZIP does not support timestamps before 1980.
(setenv "SOURCE_DATE_EPOCH" "315532800")
(invoke "flit" "build")))