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import: pypi: Include optional test inputs as native-inputs.

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* guix/import/pypi.scm (maybe-inputs): Add INPUT-TYPE argument, and use it.
(test-section?): New predicate.
(parse-requires.txt): Collect the optional test inputs, and return them as the
second element of the returned list.
(parse-wheel-metadata): Likewise.
(guess-requirements): Adapt.
(make-pypi-sexp): Likewise, and include the test inputs requirements as native
inputs in the returned package expression.

* tests/pypi.scm (test-requires.txt): Include a test section in the
test-requires.txt data.
(test-requires.txt-beaker): New variable.
("parse-requires.txt"): Adapt.
("parse-requires.txt - Beaker"): New test.
("parse-wheel-metadata, with extras"): Adapt.
("parse-wheel-metadata, with extras - Jedi"): Adapt.
("pypi->guix-package, no wheel"): Re-indent, and add the expected
native-inputs.
("pypi->guix-package, wheels"): Likewise.
This commit is contained in:
Maxim Cournoyer 2019-03-28 23:12:26 -04:00
parent f801c6215d
commit d514276b93
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GPG key ID: 1260E46482E63562
2 changed files with 166 additions and 90 deletions
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177
guix/import/pypi.scm
View file

@ -4,6 +4,7 @@
;;; Copyright © 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2018 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2019 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -26,6 +27,7 @@ (define-module (guix import pypi)
#:use-module (ice-9 receive)
#:use-module ((ice-9 rdelim) #:select (read-line))
#:use-module (srfi srfi-1)
#:use-module (srfi srfi-11)
#:use-module (srfi srfi-26)
#:use-module (srfi srfi-34)
#:use-module (srfi srfi-35)
@ -107,14 +109,15 @@ (define (wheel-url->extracted-directory wheel-url)
((name version _ ...)
(string-append name "-" version ".dist-info"))))
(define (maybe-inputs package-inputs)
(define (maybe-inputs package-inputs input-type)
"Given a list of PACKAGE-INPUTS, tries to generate the 'inputs' field of a
package definition."
package definition. INPUT-TYPE, a symbol, is used to populate the name of
the input field."
(match package-inputs
(()
'())
((package-inputs ...)
`((propagated-inputs (,'quasiquote ,package-inputs))))))
`((,input-type (,'quasiquote ,package-inputs))))))
(define %requirement-name-regexp
;; Regexp to match the requirement name in a requirement specification.
@ -154,9 +157,19 @@ (define (specification->requirement-name spec)
(or (regexp-exec %requirement-name-regexp spec)
(error (G_ "Could not extract requirement name in spec:") spec))))
(define (test-section? name)
"Return #t if the section name contains 'test' or 'dev'."
(any (cut string-contains-ci name <>)
'("test" "dev")))
(define (parse-requires.txt requires.txt)
"Given REQUIRES.TXT, a Setuptools requires.txt file, return a list of
requirement names."
"Given REQUIRES.TXT, a Setuptools requires.txt file, return a list of lists
of requirements.
The first list contains the required dependencies while the second the
optional test dependencies. Note that currently, optional, non-test
dependencies are omitted since these can be difficult or expensive to
satisfy."
(define (comment? line)
;; Return #t if the given LINE is a comment, #f otherwise.
@ -168,26 +181,49 @@ (define (section-header? line)
(call-with-input-file requires.txt
(lambda (port)
(let loop ((result '()))
(let loop ((required-deps '())
(test-deps '())
(inside-test-section? #f)
(optional? #f))
(let ((line (read-line port)))
;; Stop when a section is encountered, as sections contain optional
;; (extra) requirements. Non-optional requirements must appear
;; before any section is defined.
(cond
((or (eof-object? line) (section-header? line))
((eof-object? line)
;; Duplicates can occur, since the same requirement can be
;; listed multiple times with different conditional markers, e.g.
;; pytest >= 3 ; python_version >= "3.3"
;; pytest < 3 ; python_version < "3.3"
(reverse (delete-duplicates result)))
(map (compose reverse delete-duplicates)
(list required-deps test-deps)))
((or (string-null? line) (comment? line))
(loop result))
(else
(loop required-deps test-deps inside-test-section? optional?))
((section-header? line)
;; Encountering a section means that all the requirements
;; listed below are optional. Since we want to pick only the
;; test dependencies from the optional dependencies, we must
;; track those separately.
(loop required-deps test-deps (test-section? line) #t))
(inside-test-section?
(loop required-deps
(cons (specification->requirement-name line)
test-deps)
inside-test-section? optional?))
((not optional?)
(loop (cons (specification->requirement-name line)
result)))))))))
required-deps)
test-deps inside-test-section? optional?))
(optional?
;; Skip optional items.
(loop required-deps test-deps inside-test-section? optional?))
(else
(warning (G_ "parse-requires.txt reached an unexpected \
condition on line ~a~%") line))))))))
(define (parse-wheel-metadata metadata)
"Given METADATA, a Wheel metadata file, return a list of requirement names."
"Given METADATA, a Wheel metadata file, return a list of lists of
requirements.
Refer to the documentation of PARSE-REQUIRES.TXT for a description of the
returned value."
;; METADATA is a RFC-2822-like, header based file.
(define (requires-dist-header? line)
@ -201,21 +237,29 @@ (define (extra? line)
;; Return #t if the given LINE is an "extra" requirement.
(string-match "extra == '(.*)'" line))
(define (test-requirement? line)
(and=> (match:substring (extra? line) 1) test-section?))
(call-with-input-file metadata
(lambda (port)
(let loop ((requirements '()))
(let loop ((required-deps '())
(test-deps '()))
(let ((line (read-line port)))
;; Stop at the first 'Provides-Extra' section: the non-optional
;; requirements appear before the optional ones.
(cond
((eof-object? line)
(reverse (delete-duplicates requirements)))
(map (compose reverse delete-duplicates)
(list required-deps test-deps)))
((and (requires-dist-header? line) (not (extra? line)))
(loop (cons (specification->requirement-name
(requires-dist-value line))
requirements)))
required-deps)
test-deps))
((and (requires-dist-header? line) (test-requirement? line))
(loop required-deps
(cons (specification->requirement-name (requires-dist-value line))
test-deps)))
(else
(loop requirements))))))))
(loop required-deps test-deps)))))))) ;skip line
(define (guess-requirements source-url wheel-url archive)
"Given SOURCE-URL, WHEEL-URL and an ARCHIVE of the package, return a list
@ -268,37 +312,46 @@ (define (guess-requirements-from-source)
(()
(warning (G_ "Cannot guess requirements from source archive:\
no requires.txt file found.~%"))
'())
(list '() '()))
(else (parse-requires.txt (first requires.txt-files)))))))
(begin
(warning (G_ "Unsupported archive format; \
cannot determine package dependencies from source archive: ~a~%")
(basename source-url))
'())))
(list '() '()))))
;; First, try to compute the requirements using the wheel, else, fallback to
;; reading the "requires.txt" from the egg-info directory from the source
;; tarball.
;; archive.
(or (guess-requirements-from-wheel)
(guess-requirements-from-source)))
(define (compute-inputs source-url wheel-url archive)
"Given the SOURCE-URL of an already downloaded ARCHIVE, return a list of
name/variable pairs describing the required inputs of this package. Also
"Given the SOURCE-URL and WHEEL-URL of an already downloaded ARCHIVE, return
a pair of lists, each consisting of a list of name/variable pairs, for the
propagated inputs and the native inputs, respectively. Also
return the unaltered list of upstream dependency names."
(let ((dependencies
(remove (cut string=? "argparse" <>)
(guess-requirements source-url wheel-url archive))))
(values (sort
(map (lambda (input)
(let ((guix-name (python->package-name input)))
(list guix-name (list 'unquote (string->symbol guix-name)))))
dependencies)
(lambda args
(match args
(((a _ ...) (b _ ...))
(string-ci<? a b)))))
dependencies)))
(define (strip-argparse deps)
(remove (cut string=? "argparse" <>) deps))
(define (requirement->package-name/sort deps)
(sort
(map (lambda (input)
(let ((guix-name (python->package-name input)))
(list guix-name (list 'unquote (string->symbol guix-name)))))
deps)
(lambda args
(match args
(((a _ ...) (b _ ...))
(string-ci<? a b))))))
(define process-requirements
(compose requirement->package-name/sort strip-argparse))
(let ((dependencies (guess-requirements source-url wheel-url archive)))
(values (map process-requirements dependencies)
(concatenate dependencies))))
(define (make-pypi-sexp name version source-url wheel-url home-page synopsis
description license)
@ -307,29 +360,31 @@ (define (make-pypi-sexp name version source-url wheel-url home-page synopsis
(call-with-temporary-output-file
(lambda (temp port)
(and (url-fetch source-url temp)
(receive (input-package-names upstream-dependency-names)
(receive (guix-dependencies upstream-dependencies)
(compute-inputs source-url wheel-url temp)
(values
`(package
(name ,(python->package-name name))
(version ,version)
(source (origin
(method url-fetch)
;; Sometimes 'pypi-uri' doesn't quite work due to mixed
;; cases in NAME, for instance, as is the case with
;; "uwsgi". In that case, fall back to a full URL.
(uri (pypi-uri ,(string-downcase name) version))
(sha256
(base32
,(guix-hash-url temp)))))
(build-system python-build-system)
,@(maybe-inputs input-package-names)
(home-page ,home-page)
(synopsis ,synopsis)
(description ,description)
(license ,(license->symbol license)))
upstream-dependency-names))))))
(match guix-dependencies
((required-inputs test-inputs)
(values
`(package
(name ,(python->package-name name))
(version ,version)
(source (origin
(method url-fetch)
;; Sometimes 'pypi-uri' doesn't quite work due to mixed
;; cases in NAME, for instance, as is the case with
;; "uwsgi". In that case, fall back to a full URL.
(uri (pypi-uri ,(string-downcase name) version))
(sha256
(base32
,(guix-hash-url temp)))))
(build-system python-build-system)
,@(maybe-inputs required-inputs 'propagated-inputs)
,@(maybe-inputs test-inputs 'native-inputs)
(home-page ,home-page)
(synopsis ,synopsis)
(description ,description)
(license ,(license->symbol license)))
upstream-dependencies))))))))
(define pypi->guix-package
(memoize

79
tests/pypi.scm
View file

@ -1,6 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 David Thompson <davet@gnu.org>
;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2019 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -68,11 +69,6 @@ (define test-specifications
(define test-requires.txt "\
# A comment
# A comment after a space
bar
baz > 13.37
")
(define test-requires-with-sections "\
foo ~= 3
bar != 2
@ -80,12 +76,25 @@ (define test-requires-with-sections "\
pytest (>=2.5.0)
")
;; Beaker contains only optional dependencies.
(define test-requires.txt-beaker "\
[crypto]
pycryptopp>=0.5.12
[cryptography]
cryptography
[testsuite]
Mock
coverage
")
(define test-metadata "\
Classifier: Programming Language :: Python :: 3.7
Requires-Dist: baz ~= 3
Requires-Dist: bar != 2
Provides-Extra: test
pytest (>=2.5.0)
Requires-Dist: pytest (>=2.5.0) ; extra == 'test'
")
(define test-metadata-with-extras "
@ -139,25 +148,31 @@ (define test-metadata-with-extras-jedi "\
'("Fizzy" "PickyThing" "SomethingWithMarker" "requests" "pip")
(map specification->requirement-name test-specifications))
(test-equal "parse-requires.txt, with sections"
'("foo" "bar")
(test-equal "parse-requires.txt"
(list '("foo" "bar") '("pytest"))
(mock ((ice-9 ports) call-with-input-file
call-with-input-string)
(parse-requires.txt test-requires-with-sections)))
(parse-requires.txt test-requires.txt)))
(test-equal "parse-requires.txt - Beaker"
(list '() '("Mock" "coverage"))
(mock ((ice-9 ports) call-with-input-file
call-with-input-string)
(parse-requires.txt test-requires.txt-beaker)))
(test-equal "parse-wheel-metadata, with extras"
'("wrapt" "bar")
(list '("wrapt" "bar") '("tox" "bumpversion"))
(mock ((ice-9 ports) call-with-input-file
call-with-input-string)
(parse-wheel-metadata test-metadata-with-extras)))
(test-equal "parse-wheel-metadata, with extras - Jedi"
'("parso")
(list '("parso") '("pytest"))
(mock ((ice-9 ports) call-with-input-file
call-with-input-string)
(parse-wheel-metadata test-metadata-with-extras-jedi)))
(test-assert "pypi->guix-package"
(test-assert "pypi->guix-package, no wheel"
;; Replace network resources with sample data.
(mock ((guix import utils) url-fetch
(lambda (url file-name)
@ -198,7 +213,10 @@ (define test-metadata-with-extras-jedi "\
('propagated-inputs
('quasiquote
(("python-bar" ('unquote 'python-bar))
("python-baz" ('unquote 'python-baz)))))
("python-foo" ('unquote 'python-foo)))))
('native-inputs
('quasiquote
(("python-pytest" ('unquote 'python-pytest)))))
('home-page "http://example.com")
('synopsis "summary")
('description "summary")
@ -219,25 +237,25 @@ (define test-metadata-with-extras-jedi "\
(begin
(mkdir-p "foo-1.0.0/foo.egg-info/")
(with-output-to-file "foo-1.0.0/foo.egg-info/requires.txt"
(lambda ()
(display "wrong data to make sure we're testing wheels ")))
(lambda ()
(display "wrong data to make sure we're testing wheels ")))
(parameterize ((current-output-port (%make-void-port "rw+")))
(system* "tar" "czvf" file-name "foo-1.0.0/"))
(delete-file-recursively "foo-1.0.0")
(set! test-source-hash
(call-with-input-file file-name port-sha256))))
(delete-file-recursively "foo-1.0.0")
(set! test-source-hash
(call-with-input-file file-name port-sha256))))
("https://example.com/foo-1.0.0-py2.py3-none-any.whl"
(begin
(mkdir "foo-1.0.0.dist-info")
(with-output-to-file "foo-1.0.0.dist-info/METADATA"
(lambda ()
(display test-metadata)))
(let ((zip-file (string-append file-name ".zip")))
;; zip always adds a "zip" extension to the file it creates,
;; so we need to rename it.
(system* "zip" zip-file "foo-1.0.0.dist-info/METADATA")
(rename-file zip-file file-name))
(delete-file-recursively "foo-1.0.0.dist-info")))
(begin
(mkdir "foo-1.0.0.dist-info")
(with-output-to-file "foo-1.0.0.dist-info/METADATA"
(lambda ()
(display test-metadata)))
(let ((zip-file (string-append file-name ".zip")))
;; zip always adds a "zip" extension to the file it creates,
;; so we need to rename it.
(system* "zip" "-q" zip-file "foo-1.0.0.dist-info/METADATA")
(rename-file zip-file file-name))
(delete-file-recursively "foo-1.0.0.dist-info")))
(_ (error "Unexpected URL: " url)))))
(mock ((guix http-client) http-fetch
(lambda (url . rest)
@ -265,6 +283,9 @@ (define test-metadata-with-extras-jedi "\
('quasiquote
(("python-bar" ('unquote 'python-bar))
("python-baz" ('unquote 'python-baz)))))
('native-inputs
('quasiquote
(("python-pytest" ('unquote 'python-pytest)))))
('home-page "http://example.com")
('synopsis "summary")
('description "summary")