Merge branch 'master' into core-updates

gnu/packages/bioinformatics.scm

@@ -7675,13 +7675,13 @@ (define-public r-genomicalignments
 (define-public r-rtracklayer
   (package
     (name "r-rtracklayer")
-    (version "1.40.2")
+    (version "1.40.3")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "rtracklayer" version))
               (sha256
                (base32
-                "0l90jn4df3akxl0n1i9wvnbjqrzjc0d15r8vqr7b15q2117mrn5r"))))
+                "0kvsjdaypn1jnxbnsxpycildwdyxwnjkigfq8qm8mlyfc4ahdgy3"))))
     (build-system r-build-system)
     (arguments
      `(#:phases
@@ -8492,14 +8492,14 @@ (define-public r-rhtslib
 (define-public r-bamsignals
   (package
     (name "r-bamsignals")
-    (version "1.12.0")
+    (version "1.12.1")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "bamsignals" version))
        (sha256
         (base32
-         "09l4v414ijkjpkvcv2580v13v18ky196f0lv27ldblpa8bddvmns"))))
+         "141q3p4lzwiqk1mfxi8q1q84axjl0gyiqg59xd3sp4viny4jqmgv"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-biocgenerics" ,r-biocgenerics)
@@ -9234,13 +9234,13 @@ (define-public r-copywriter
 (define-public r-methylkit
   (package
     (name "r-methylkit")
-    (version "1.6.0")
+    (version "1.6.1")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "methylKit" version))
               (sha256
                (base32
-                "01qmndm5z21p78w7xfp8ynan6jpfg54rnkpj8b86rc081qh0sgjj"))))
+                "1hr2czi5ybdf7hdmqsv39d17f3mvmw94wa38bc14zzm9mgy9gfy7"))))
     (properties `((upstream-name . "methylKit")))
     (build-system r-build-system)
     (propagated-inputs

gnu/packages/cran.scm

@@ -1289,14 +1289,14 @@ (define-public r-suppdists
 (define-public r-ksamples
   (package
     (name "r-ksamples")
-    (version "1.2-7")
+    (version "1.2-8")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "kSamples" version))
        (sha256
         (base32
-         "0f19rjngk0lg6s8c6h5l55qpxp8sl4vxj3kpi05cizzncny9b9bj"))))
+         "15d5q5vpp4wx5rk5kjxjdxpwc8mkq5sbdz8gi07iscrvhzb5rzfr"))))
     (properties `((upstream-name . "kSamples")))
     (build-system r-build-system)
     (propagated-inputs
@@ -2936,14 +2936,14 @@ (define-public r-quantmod
 (define-public r-tseries
   (package
     (name "r-tseries")
-    (version "0.10-44")
+    (version "0.10-45")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "tseries" version))
        (sha256
         (base32
-         "0nz6v76hsxcprpgf84al5r0p08sr9qacqal4adndz9wmg604l4ag"))))
+         "14s1glh5zzdvdl05a2z7ymhgf962svxf8xircghg5sc649lb33n0"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-quadprog" ,r-quadprog)
@@ -3202,14 +3202,14 @@ (define-public r-phontools
 (define-public r-np
   (package
     (name "r-np")
-    (version "0.60-7")
+    (version "0.60-8")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "np" version))
        (sha256
         (base32
-         "02h62n5xclr01fx88ayp7y1s9gcnb11zb1vqshvdcq31v18h7kf2"))))
+         "17h67a510wh83800ri6g02wvznrlhigxni8shyijz1iaxcpk8k4j"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-boot" ,r-boot)

gnu/packages/statistics.scm

@@ -5344,14 +5344,14 @@ (define-public r-tclust
 (define-public r-ranger
   (package
     (name "r-ranger")
-    (version "0.10.0")
+    (version "0.10.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "ranger" version))
        (sha256
         (base32
-         "1yl833cm2jpfy9j7zchkq4mm5x1av70w89zrhpwdn8nq2npxxzf0"))))
+         "12z67xkgdmr5cflpd6cln0mn5xxajanqbfwlckv6cfma0gvf2z1j"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-rcpp" ,r-rcpp)