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gnu: Add r-bedtorch.
* gnu/packages/bioinformatics.scm (r-bedtorch): New variable.
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@ -538,6 +538,46 @@ (define-public pbcopper
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and utilities for PacBio C++ applications.")
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and utilities for PacBio C++ applications.")
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(license license:bsd-3)))
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(license license:bsd-3)))
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(define-public r-bedtorch
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(let ((commit "f5ff4f83b94f59eac660333c64e4b2f296b35cea")
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(revision "1"))
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(package
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(name "r-bedtorch")
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(version (git-version "0.1.12.12" revision commit))
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/haizi-zh/bedtorch/")
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(commit commit)))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"08l04iqf54b5995gc7rvqqd7w327fwqs7qjyhc9y5cqfj8yv4c48"))))
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(properties `((upstream-name . "bedtorch")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-assertthat
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r-curl
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r-data-table
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r-dplyr
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r-genomeinfodb
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r-genomicranges
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r-purrr
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r-r-utils
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r-rcpp
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r-rcurl
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r-readr
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r-rhtslib12
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r-s4vectors
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r-stringr
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r-tidyr))
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(home-page "https://github.com/haizi-zh/bedtorch/")
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(synopsis "R package for fast BED-file manipulation")
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(description
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"The goal of bedtorch is to provide a fast BED file manipulation tool
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suite native in R.")
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(license license:expat))))
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(define-public r-btools
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(define-public r-btools
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(let ((commit "fa21d4ca01d37ea4d98b45582453f3bf95cbc2b5")
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(let ((commit "fa21d4ca01d37ea4d98b45582453f3bf95cbc2b5")
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(revision "1"))
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(revision "1"))
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