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gnu: snap-aligner: Fetch sources from git.

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* gnu/packages/bioinformatics.scm (snap-aligner)[source]: Fetch from git.
[arguments]: Use INVOKE.
This commit is contained in:
Ricardo Wurmus 2018-11-07 23:06:28 +01:00
parent 6236524409
commit e0a8fc85dd
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1 changed files with 7 additions and 7 deletions
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gnu/packages/bioinformatics.scm
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@ -5906,20 +5906,20 @@ (define-public snap-aligner
(name "snap-aligner")
(version "1.0beta.18")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/amplab/snap/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/amplab/snap.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1vnsjwv007k1fl1q7d681kbwn6bc66cgw6h16hym6gvyy71qv2ly"))))
"01w3qq4wm07z73vky0cfwlmrbf50n3w722cxrlzxfi99mnb808d8"))))
(build-system gnu-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(delete 'configure)
(replace 'check (lambda _ (zero? (system* "./unit_tests"))))
(replace 'check (lambda _ (invoke "./unit_tests") #t))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))