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gnu: r-motifbreakr: Update to 2.2.0.

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* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.2.0.
[propagated-inputs]: Add r-summarizedexperiment.
[native-inputs]: Add r-knitr.
This commit is contained in:
Ricardo Wurmus 2020-06-13 00:51:07 +02:00
parent da6a75fe00
commit e65783e032
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1 changed files with 17 additions and 14 deletions
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31
gnu/packages/bioconductor.scm
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@ -4236,32 +4236,35 @@ (define-public r-motifdb
(define-public r-motifbreakr
(package
(name "r-motifbreakr")
(version "2.0.0")
(version "2.2.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "motifbreakR" version))
(sha256
(base32 "190z8gj393qdpq5wz7gph96k0l8c1j9wd0p0llscysvk5kr1hf9n"))))
(base32 "09czgmyjcycsvyvadpjddwwvqvxzd0ba3zhczh4mqc09gwa6vhlm"))))
(properties `((upstream-name . "motifbreakR")))
(build-system r-build-system)
(propagated-inputs
`(("r-grimport" ,r-grimport)
("r-stringr" ,r-stringr)
("r-biocgenerics" ,r-biocgenerics)
("r-s4vectors" ,r-s4vectors)
("r-iranges" ,r-iranges)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicranges" ,r-genomicranges)
`(("r-biocgenerics" ,r-biocgenerics)
("r-biocparallel" ,r-biocparallel)
("r-biostrings" ,r-biostrings)
("r-bsgenome" ,r-bsgenome)
("r-rtracklayer" ,r-rtracklayer)
("r-variantannotation" ,r-variantannotation)
("r-biocparallel" ,r-biocparallel)
("r-motifstack" ,r-motifstack)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicranges" ,r-genomicranges)
("r-grimport" ,r-grimport)
("r-gviz" ,r-gviz)
("r-iranges" ,r-iranges)
("r-matrixstats" ,r-matrixstats)
("r-motifdb" ,r-motifdb)
("r-motifstack" ,r-motifstack)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-stringr" ,r-stringr)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-tfmpvalue" ,r-tfmpvalue)
("r-motifdb" ,r-motifdb)))
("r-variantannotation" ,r-variantannotation)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://www.bioconductor.org/packages/motifbreakR/")
(synopsis "Predicting disruptiveness of single nucleotide polymorphisms")
(description "This package allows biologists to judge in the first place