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gnu: Add r-chicago.
* gnu/packages/bioconductor.scm (r-chicago): New variable.
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@ -9949,6 +9949,32 @@ (define-public r-rcistarget
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genes in the gene-set that are ranked above the leading edge).")
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(license license:gpl3)))
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(define-public r-chicago
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(package
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(name "r-chicago")
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(version "1.20.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "Chicago" version))
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(sha256
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(base32
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"0dkwy6pfvzd7g4qmhjl24ypn92l78w1zy0ajhcxgg39f7zsq883x"))))
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(properties `((upstream-name . "Chicago")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-data-table" ,r-data-table)
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("r-delaporte" ,r-delaporte)
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("r-hmisc" ,r-hmisc)
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("r-mass" ,r-mass)
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("r-matrixstats" ,r-matrixstats)))
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(native-inputs `(("r-knitr" ,r-knitr)))
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(home-page "https://bioconductor.org/packages/Chicago")
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(synopsis "Capture Hi-C analysis of genomic organization")
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(description
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"This package provides a pipeline for analysing Capture Hi-C data.")
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(license license:artistic2.0)))
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(define-public r-cicero
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(package
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(name "r-cicero")
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