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Merge branch 'master' into staging

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Marius Bakke 2017-09-21 20:34:49 +02:00
commit efa0ba499e
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10 changed files with 93 additions and 105 deletions
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1
gnu/local.mk
View file

@ -593,7 +593,6 @@ dist_patch_DATA = \
%D%/packages/patches/emacs-fix-scheme-indent-function.patch \
%D%/packages/patches/emacs-scheme-complete-scheme-r5rs-info.patch \
%D%/packages/patches/emacs-source-date-epoch.patch \
%D%/packages/patches/emacs-unsafe-enriched-mode-translations.patch \
%D%/packages/patches/erlang-man-path.patch \
%D%/packages/patches/eudev-rules-directory.patch \
%D%/packages/patches/evilwm-lost-focus-bug.patch \

10
gnu/packages/astronomy.scm
View file

@ -64,7 +64,7 @@ (define-public cfitsio
(define-public wcslib
(package
(name "wcslib")
(version "5.16")
(version "5.17")
(source
(origin
(method url-fetch)
@ -72,7 +72,7 @@ (define-public wcslib
"ftp://ftp.atnf.csiro.au/pub/software/wcslib/" name "-" version
".tar.bz2"))
(sha256
(base32 "1vwrzkznpig2q40m11j12hsfqvsjz8z44l66pz5fkh6fy461w0zd"))))
(base32 "0v23x1fw01arhmqdrzfd9n593mjglhzfyx4793v065z0dg4bb72w"))))
(inputs
`(("cfitsio" ,cfitsio)))
(build-system gnu-build-system)
@ -83,7 +83,7 @@ (define-public wcslib
(substitute* "makedefs.in"
(("/bin/sh") "sh"))
#t)))))
(home-page "http://www.atnf.csiro.au/people/mcalabre/WCS")
(home-page "https://www.atnf.csiro.au/people/mcalabre/WCS")
(synopsis "Library which implements the FITS WCS standard")
(description "The FITS \"World Coordinate System\" (WCS) standard defines
keywords and usage that provide for the description of astronomical coordinate
@ -93,7 +93,7 @@ (define-public wcslib
(define-public gnuastro
(package
(name "gnuastro")
(version "0.3")
(version "0.4")
(source
(origin
(method url-fetch)
@ -101,7 +101,7 @@ (define-public gnuastro
version ".tar.gz"))
(sha256
(base32
"109xjwbs36gbkx5sd5yzf6ailfcldc5d28vl1n19z0ylfzww4nwa"))))
"1n30zz4kg89ic5h30b7nrxp0bk0ls2m3xnfi81mja56bxxwpihrs"))))
(inputs
`(("cfitsio" ,cfitsio)
("gsl" ,gsl)

7
gnu/packages/emacs.scm
View file

@ -103,18 +103,17 @@ (define-module (gnu packages emacs)
(define-public emacs
(package
(name "emacs")
(version "25.2")
(version "25.3")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnu/emacs/emacs-"
version ".tar.xz"))
(sha256
(base32
"1ykkq0xl28ljdg61bm6gzy04ww86ajms98gix72qg6cpr6a53dar"))
"02y00y9q42g1iqgz5qhmsja75hwxd88yrn9zp14lanay0zkwafi5"))
(patches (search-patches "emacs-exec-path.patch"
"emacs-fix-scheme-indent-function.patch"
"emacs-source-date-epoch.patch"
"emacs-unsafe-enriched-mode-translations.patch"))
"emacs-source-date-epoch.patch"))
(modules '((guix build utils)))
(snippet
;; Delete the bundled byte-compiled elisp files and

34
gnu/packages/gnome.scm
View file

@ -138,6 +138,7 @@ (define-module (gnu packages gnome)
#:use-module (gnu packages fonts)
#:use-module (gnu packages speech)
#:use-module (gnu packages virtualization)
#:use-module (gnu packages vpn)
#:use-module (srfi srfi-1))
(define-public brasero
@ -5039,6 +5040,39 @@ (define-public network-manager
(license license:gpl2+)
(properties '((upstream-name . "NetworkManager")))))
(define-public network-manager-openvpn
(package
(name "network-manager-openvpn")
(version "1.2.10")
(source (origin
(method url-fetch)
(uri (string-append
"mirror://gnome/sources/NetworkManager-openvpn/"
(version-major+minor version)
"/NetworkManager-openvpn-" version ".tar.xz"))
(sha256
(base32
"0q9x61fq509gybz3ljzyvf9zn8nlya1r2vk7jl0gk3fp76jsg1mc"))))
(build-system gnu-build-system)
(arguments
'(#:configure-flags '("--enable-absolute-paths")))
(native-inputs
`(("pkg-config" ,pkg-config)
("intltool" ,intltool)))
(inputs
`(("gtk+" ,gtk+)
("openvpn" ,openvpn)
("network-manager" ,network-manager)
("network-manager-applet" ,network-manager-applet) ;for libnma
("libsecret" ,libsecret)))
(home-page "https://wiki.gnome.org/Projects/NetworkManager/VPN")
(synopsis "OpenVPN plug-in for NetworkManager")
(description
"This extension of NetworkManager allows it to take care of connections
to virtual private networks (VPNs) via OpenVPN.")
(license license:gpl2+)
(properties `((upstream-name . "NetworkManager-openvpn")))))
(define-public mobile-broadband-provider-info
(package
(name "mobile-broadband-provider-info")

11
gnu/packages/machine-learning.scm
View file

@ -520,14 +520,14 @@ (define-public r-kernlab
(define-public dlib
(package
(name "dlib")
(version "19.3")
(version "19.7")
(source (origin
(method url-fetch)
(uri (string-append
"http://dlib.net/files/dlib-" version ".tar.bz2"))
(sha256
(base32
"0gfy83av717qymv53yv7ki6mgh6mdw4xcxxbjk8lrs72f8qvnrcw"))
"1mljz02kwkrbggyncxv5fpnyjdybw2qihaacb3js8yfkw12vwpc2"))
(modules '((guix build utils)))
(snippet
'(begin
@ -537,7 +537,11 @@ (define-public dlib
#t))))
(build-system cmake-build-system)
(arguments
`(#:phases
;; Recent releases defaults to "lib64" on 64bit.
`(#:configure-flags (list (string-append "-DCMAKE_INSTALL_LIBDIR="
(assoc-ref %outputs "out")
"/lib"))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'disable-asserts
(lambda _
@ -572,7 +576,6 @@ (define-public dlib
;; No test target, so we build and run the unit tests here.
(let ((test-dir (string-append "../dlib-" ,version "/dlib/test")))
(with-directory-excursion test-dir
(setenv "CXXFLAGS" "-std=gnu++11")
(and (zero? (system* "make" "-j" (number->string (parallel-job-count))))
(zero? (system* "./dtest" "--runall")))))))
(add-after 'install 'delete-static-library

85
gnu/packages/patches/emacs-unsafe-enriched-mode-translations.patch
View file

@ -1,85 +0,0 @@
This patch fixes a remote code execution vulnerability reported here:
https://bugs.gnu.org/28350
http://www.openwall.com/lists/oss-security/2017/09/11/1
From 9ad0fcc54442a9a01d41be19880250783426db70 Mon Sep 17 00:00:00 2001
From: Lars Ingebrigtsen <larsi@gnus.org>
Date: Fri, 8 Sep 2017 20:23:31 -0700
Subject: Remove unsafe enriched mode translations
* lisp/gnus/mm-view.el (mm-inline-text):
Do not worry about enriched or richtext type.
* lisp/textmodes/enriched.el (enriched-translations):
Remove translations for FUNCTION, display (Bug#28350).
(enriched-handle-display-prop, enriched-decode-display-prop): Remove.
---
lisp/gnus/mm-view.el | 4 ----
lisp/textmodes/enriched.el | 32 --------------------------------
2 files changed, 36 deletions(-)
diff --git a/lisp/gnus/mm-view.el b/lisp/gnus/mm-view.el
index e5859d0..77ad271 100644
--- a/lisp/gnus/mm-view.el
+++ b/lisp/gnus/mm-view.el
@@ -383,10 +383,6 @@
(goto-char (point-max))))
(save-restriction
(narrow-to-region b (point))
- (when (member type '("enriched" "richtext"))
- (set-text-properties (point-min) (point-max) nil)
- (ignore-errors
- (enriched-decode (point-min) (point-max))))
(mm-handle-set-undisplayer
handle
`(lambda ()
diff --git a/lisp/textmodes/enriched.el b/lisp/textmodes/enriched.el
index beb6c6d..a8f0d38 100644
--- a/lisp/textmodes/enriched.el
+++ b/lisp/textmodes/enriched.el
@@ -117,12 +117,7 @@ expression, which is evaluated to get the string to insert.")
(full "flushboth")
(center "center"))
(PARAMETER (t "param")) ; Argument of preceding annotation
- ;; The following are not part of the standard:
- (FUNCTION (enriched-decode-foreground "x-color")
- (enriched-decode-background "x-bg-color")
- (enriched-decode-display-prop "x-display"))
(read-only (t "x-read-only"))
- (display (nil enriched-handle-display-prop))
(unknown (nil format-annotate-value))
; (font-size (2 "bigger") ; unimplemented
; (-2 "smaller"))
@@ -477,32 +472,5 @@ Return value is \(begin end name positive-p), or nil if none was found."
(message "Warning: no color specified for <x-bg-color>")
nil))
-;;; Handling the `display' property.
-
-
-(defun enriched-handle-display-prop (old new)
- "Return a list of annotations for a change in the `display' property.
-OLD is the old value of the property, NEW is the new value. Value
-is a list `(CLOSE OPEN)', where CLOSE is a list of annotations to
-close and OPEN a list of annotations to open. Each of these lists
-has the form `(ANNOTATION PARAM ...)'."
- (let ((annotation "x-display")
- (param (prin1-to-string (or old new))))
- (if (null old)
- (cons nil (list (list annotation param)))
- (cons (list (list annotation param)) nil))))
-
-(defun enriched-decode-display-prop (start end &optional param)
- "Decode a `display' property for text between START and END.
-PARAM is a `<param>' found for the property.
-Value is a list `(START END SYMBOL VALUE)' with START and END denoting
-the range of text to assign text property SYMBOL with value VALUE."
- (let ((prop (when (stringp param)
- (condition-case ()
- (car (read-from-string param))
- (error nil)))))
- (unless prop
- (message "Warning: invalid <x-display> parameter %s" param))
- (list start end 'display prop)))
;;; enriched.el ends here

4
gnu/packages/simulation.scm
View file

@ -195,8 +195,8 @@ (define-public openfoam
;; $ source $GUIX_PROFILE/lib/OpenFOAM-4.1/etc/bashrc
;; $ mkdir -p $FOAM_RUN
;; $ cd $FOAM_RUN
;; $ cp -r $FOAM_TUTORIALS/incompressible/simpleFoam/pitzdaily .
;; $ cd pitzdaily
;; $ cp -r $FOAM_TUTORIALS/incompressible/simpleFoam/pitzDaily .
;; $ cd pitzDaily
;; $ chmod -R u+w .
;; $ blockMesh
(synopsis "Framework for numerical simulation of fluid flow")

38
gnu/packages/version-control.scm
View file

@ -713,6 +713,44 @@ (define-public stgit
manipulate them in various ways.")
(license license:gpl2)))
(define-public vcsh
(package
(name "vcsh")
(version "1.20151229")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/RichiH/vcsh/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1ym3swkh738c3vciffvlr96vqzhwmzkb8ajqzap8f0j9n039a1mf"))))
(build-system gnu-build-system)
(native-inputs
`(("which" ,which)))
(inputs
`(("git" ,git)
("perl" ,perl)
("perl-test-harness" ,perl-test-harness)
("perl-shell-command" ,perl-shell-command)
("perl-test-most" ,perl-test-most)))
(arguments
'(#:phases (modify-phases %standard-phases
(delete 'configure)
(delete 'build))
#:make-flags (list (string-append "PREFIX="
(assoc-ref %outputs "out")))
#:test-target "test"))
(home-page "https://github.com/RichiH/vcsh")
(synopsis "Version control system for @code{$HOME}")
(description
"vcsh version-controls configuration files in several Git repositories,
all in one single directory. They all maintain their working trees without
clobbering each other or interfering otherwise. By default, all Git
repositories maintained via vcsh store the actual files in @code{$HOME},
though this can be overridden.")
(license license:gpl2+)))
(define-public git-test-sequence
(let ((commit "48e5a2f5a13a5f30452647237e23362b459b9c76"))
(package

4
gnu/packages/vim.scm
View file

@ -60,7 +60,7 @@ (define-module (gnu packages vim)
(define-public vim
(package
(name "vim")
(version "8.0.0808")
(version "8.0.1130")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/vim/vim/archive/v"
@ -68,7 +68,7 @@ (define-public vim
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0qrn9fhq5wdrrf2qhpygwfm5rynl32l406xhbr7lg69r9wl8cjjn"))))
"0zqyk7086crc6q5fil38szppx9sgd14fs3wb9h4ak13jg6s2ir90"))))
(build-system gnu-build-system)
(arguments
`(#:test-target "test"

4
gnu/packages/virtualization.scm
View file

@ -484,7 +484,7 @@ (define-public python2-libvirt
(define-public virt-manager
(package
(name "virt-manager")
(version "1.4.2")
(version "1.4.3")
(source (origin
(method url-fetch)
(uri (string-append "https://virt-manager.org/download/sources"
@ -492,7 +492,7 @@ (define-public virt-manager
version ".tar.gz"))
(sha256
(base32
"0x6mnqw8bng3r69pvmnq9q6yyhicxg22yz62b6dzbb4z16xl1r23"))))
"093azs8p4p7y4nf5j25xpsvdxww7gky1g0hs8mkcvmpxl2wjd0jj"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2