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gnu: Add r-genomegraphs.

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* gnu/packages/bioconductor.scm (r-genomegraphs): New variable.
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Ricardo Wurmus 2019-09-15 22:51:52 +02:00
parent 4c63eeb8a4
commit f5349b4d5a
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gnu/packages/bioconductor.scm
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@ -5947,3 +5947,31 @@ (define-public r-variantfiltering
model, amino acid change consequence, minor allele frequencies across human
populations, splice site strength, conservation, etc.")
(license license:artistic2.0)))
(define-public r-genomegraphs
(package
(name "r-genomegraphs")
(version "1.44.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "GenomeGraphs" version))
(sha256
(base32
"026skcn2cqchlzaqsnk11gb8d8aq1rz7lrnx4mmsba234mh4j7kd"))))
(properties `((upstream-name . "GenomeGraphs")))
(build-system r-build-system)
(propagated-inputs
`(("r-biomart" ,r-biomart)))
(home-page "https://bioconductor.org/packages/GenomeGraphs/")
(synopsis "Plotting genomic information from Ensembl")
(description
"Genomic data analyses requires integrated visualization of known genomic
information and new experimental data. GenomeGraphs uses the biomaRt package
to perform live annotation queries to Ensembl and translates this to e.g.
gene/transcript structures in viewports of the grid graphics package. This
results in genomic information plotted together with your data. Another
strength of GenomeGraphs is to plot different data types such as array CGH,
gene expression, sequencing and other data, together in one plot using the
same genome coordinate system.")
(license license:artistic2.0)))