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gnu: elemental: Update to 0.87.7-0.6eb15a0.

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The build of elemental is failed on GCC 7+:
https://github.com/elemental/Elemental/issues/254

Fixed but not released yet in merge request:
https://github.com/elemental/Elemental/pull/259

* gnu/packages/maths.scm (elemental): Update to 0.87.7-0.6eb15a0.

Change-Id: I333f1de160489035f1a8875173abdd57c03ef777
Signed-off-by: Eric Bavier <bavier@posteo.net>
This commit is contained in:
Sharlatan Hellseher 2023-11-05 14:56:20 +00:00 committed by Eric Bavier
parent 6c077dd304
commit f653560990
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GPG key ID: BC45CA67E2F8D007
1 changed files with 57 additions and 52 deletions
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109
gnu/packages/maths.scm
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@ -7593,60 +7593,65 @@ (define-public elpa-openmpi
(synopsis "Eigenvalue solvers for symmetric matrices (with MPI support)")))
(define-public elemental
(package
(name "elemental")
(version "0.87.7")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/elemental/Elemental")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1687xpjjzig27y2pnqv7hv09smpijyfdpz7qjgmcxf4shfajlfkc"))))
(build-system cmake-build-system)
(home-page "https://github.com/elemental/Elemental")
(native-inputs
(list gfortran))
(inputs
`(("blas" ,openblas)
("gfortran:lib" ,gfortran "lib")
("gmp" ,gmp)
("lapack" ,lapack)
("metis" ,metis)
("mpc" ,mpc)
("mpfr" ,mpfr)
("mpi" ,openmpi)
("qd" ,qd)))
(arguments
`(#:build-type "Release" ;default RelWithDebInfo not supported
#:configure-flags `("-DEL_DISABLE_PARMETIS:BOOL=YES"
"-DEL_AVOID_COMPLEX_MPI:BOOL=NO"
"-DEL_CACHE_WARNINGS:BOOL=YES"
"-DEL_TESTS:BOOL=YES"
"-DCMAKE_INSTALL_LIBDIR=lib"
"-DGFORTRAN_LIB=gfortran")
#:phases (modify-phases %standard-phases
(add-before 'check 'mpi-setup
,%openmpi-setup)
(add-before 'check 'setup-tests
(lambda _
;; Parallelism is done at the MPI layer.
(setenv "OMP_NUM_THREADS" "1")
#t))
(add-after 'install 'remove-tests
(lambda* (#:key outputs #:allow-other-keys)
;; Tests are installed, with no easy configuration
;; switch to prevent this, so delete them.
(delete-file-recursively
(string-append (assoc-ref outputs "out") "/bin"))
#t)))))
(synopsis "Dense and sparse-direct linear algebra and optimization")
(description "Elemental is a modern C++ library for distributed-memory
;; The build of 0.87.7 is failed for a long time due to new version of GCC. The
;; latest commit has fixes.
;; See https://github.com/elemental/Elemental/issues/254
(let ((commit "6eb15a0da2a4998bf1cf971ae231b78e06d989d9")
(revision "0"))
(package
(name "elemental")
(version (git-version "0.87.7" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/elemental/Elemental")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"06xcs4ic60ndcf2hq19gr8yjwdsnphpcyhapab41rkw726z4lm7p"))))
(build-system cmake-build-system)
(home-page "https://github.com/elemental/Elemental")
(native-inputs
(list gfortran))
(inputs
`(("blas" ,openblas)
("gfortran:lib" ,gfortran "lib")
("gmp" ,gmp)
("lapack" ,lapack)
("metis" ,metis)
("mpc" ,mpc)
("mpfr" ,mpfr)
("mpi" ,openmpi)
("qd" ,qd)))
(arguments
`(#:build-type "Release" ;default RelWithDebInfo not supported
#:configure-flags `("-DEL_DISABLE_PARMETIS:BOOL=YES"
"-DEL_AVOID_COMPLEX_MPI:BOOL=NO"
"-DEL_CACHE_WARNINGS:BOOL=YES"
"-DEL_TESTS:BOOL=YES"
"-DCMAKE_INSTALL_LIBDIR=lib"
"-DGFORTRAN_LIB=gfortran")
#:phases (modify-phases %standard-phases
(add-before 'check 'mpi-setup
,%openmpi-setup)
(add-before 'check 'setup-tests
(lambda _
;; Parallelism is done at the MPI layer.
(setenv "OMP_NUM_THREADS" "1")
#t))
(add-after 'install 'remove-tests
(lambda* (#:key outputs #:allow-other-keys)
;; Tests are installed, with no easy configuration
;; switch to prevent this, so delete them.
(delete-file-recursively
(string-append (assoc-ref outputs "out") "/bin"))
#t)))))
(synopsis "Dense and sparse-direct linear algebra and optimization")
(description "Elemental is a modern C++ library for distributed-memory
dense and sparse-direct linear algebra, conic optimization, and lattice
reduction.")
(license license:bsd-2)))
(license license:bsd-2))))
(define-public mcrl2
(package