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gnu: elemental: Update to 0.87.7-0.6eb15a0.

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The build of elemental is failed on GCC 7+:
https://github.com/elemental/Elemental/issues/254

Fixed but not released yet in merge request:
https://github.com/elemental/Elemental/pull/259

* gnu/packages/maths.scm (elemental): Update to 0.87.7-0.6eb15a0.

Change-Id: I333f1de160489035f1a8875173abdd57c03ef777
Signed-off-by: Eric Bavier <bavier@posteo.net>
This commit is contained in:
Sharlatan Hellseher 2023-11-05 14:56:20 +00:00 committed by Eric Bavier
parent 6c077dd304
commit f653560990
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GPG key ID: BC45CA67E2F8D007
1 changed files with 57 additions and 52 deletions
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109
gnu/packages/maths.scm
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@ -7593,60 +7593,65 @@ (define-public elpa-openmpi
(synopsis "Eigenvalue solvers for symmetric matrices (with MPI support)"))) (synopsis "Eigenvalue solvers for symmetric matrices (with MPI support)")))
(define-public elemental (define-public elemental
(package ;; The build of 0.87.7 is failed for a long time due to new version of GCC. The
(name "elemental") ;; latest commit has fixes.
(version "0.87.7") ;; See https://github.com/elemental/Elemental/issues/254
(source (origin (let ((commit "6eb15a0da2a4998bf1cf971ae231b78e06d989d9")
(method git-fetch) (revision "0"))
(uri (git-reference (package
(url "https://github.com/elemental/Elemental") (name "elemental")
(commit (string-append "v" version)))) (version (git-version "0.87.7" revision commit))
(file-name (git-file-name name version)) (source (origin
(sha256 (method git-fetch)
(base32 (uri (git-reference
"1687xpjjzig27y2pnqv7hv09smpijyfdpz7qjgmcxf4shfajlfkc")))) (url "https://github.com/elemental/Elemental")
(build-system cmake-build-system) (commit commit)))
(home-page "https://github.com/elemental/Elemental") (file-name (git-file-name name version))
(native-inputs (sha256
(list gfortran)) (base32
(inputs "06xcs4ic60ndcf2hq19gr8yjwdsnphpcyhapab41rkw726z4lm7p"))))
`(("blas" ,openblas) (build-system cmake-build-system)
("gfortran:lib" ,gfortran "lib") (home-page "https://github.com/elemental/Elemental")
("gmp" ,gmp) (native-inputs
("lapack" ,lapack) (list gfortran))
("metis" ,metis) (inputs
("mpc" ,mpc) `(("blas" ,openblas)
("mpfr" ,mpfr) ("gfortran:lib" ,gfortran "lib")
("mpi" ,openmpi) ("gmp" ,gmp)
("qd" ,qd))) ("lapack" ,lapack)
(arguments ("metis" ,metis)
`(#:build-type "Release" ;default RelWithDebInfo not supported ("mpc" ,mpc)
#:configure-flags `("-DEL_DISABLE_PARMETIS:BOOL=YES" ("mpfr" ,mpfr)
"-DEL_AVOID_COMPLEX_MPI:BOOL=NO" ("mpi" ,openmpi)
"-DEL_CACHE_WARNINGS:BOOL=YES" ("qd" ,qd)))
"-DEL_TESTS:BOOL=YES" (arguments
"-DCMAKE_INSTALL_LIBDIR=lib" `(#:build-type "Release" ;default RelWithDebInfo not supported
"-DGFORTRAN_LIB=gfortran") #:configure-flags `("-DEL_DISABLE_PARMETIS:BOOL=YES"
#:phases (modify-phases %standard-phases "-DEL_AVOID_COMPLEX_MPI:BOOL=NO"
(add-before 'check 'mpi-setup "-DEL_CACHE_WARNINGS:BOOL=YES"
,%openmpi-setup) "-DEL_TESTS:BOOL=YES"
(add-before 'check 'setup-tests "-DCMAKE_INSTALL_LIBDIR=lib"
(lambda _ "-DGFORTRAN_LIB=gfortran")
;; Parallelism is done at the MPI layer. #:phases (modify-phases %standard-phases
(setenv "OMP_NUM_THREADS" "1") (add-before 'check 'mpi-setup
#t)) ,%openmpi-setup)
(add-after 'install 'remove-tests (add-before 'check 'setup-tests
(lambda* (#:key outputs #:allow-other-keys) (lambda _
;; Tests are installed, with no easy configuration ;; Parallelism is done at the MPI layer.
;; switch to prevent this, so delete them. (setenv "OMP_NUM_THREADS" "1")
(delete-file-recursively #t))
(string-append (assoc-ref outputs "out") "/bin")) (add-after 'install 'remove-tests
#t))))) (lambda* (#:key outputs #:allow-other-keys)
(synopsis "Dense and sparse-direct linear algebra and optimization") ;; Tests are installed, with no easy configuration
(description "Elemental is a modern C++ library for distributed-memory ;; switch to prevent this, so delete them.
(delete-file-recursively
(string-append (assoc-ref outputs "out") "/bin"))
#t)))))
(synopsis "Dense and sparse-direct linear algebra and optimization")
(description "Elemental is a modern C++ library for distributed-memory
dense and sparse-direct linear algebra, conic optimization, and lattice dense and sparse-direct linear algebra, conic optimization, and lattice
reduction.") reduction.")
(license license:bsd-2))) (license license:bsd-2))))
(define-public mcrl2 (define-public mcrl2
(package (package