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gnu: Add ivar.

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* gnu/packages/bioinformatics.scm (ivar): New variable.
This commit is contained in:
Ricardo Wurmus 2021-08-25 11:21:42 +02:00
parent ae3e6ba506
commit f66759e0b2
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1 changed files with 26 additions and 0 deletions
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gnu/packages/bioinformatics.scm
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@ -14272,6 +14272,32 @@ (define-public lofreq
usually ignored by other methods or only used for filtering.")
(license license:expat)))
(define-public ivar
(package
(name "ivar")
(version "1.3.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/andersen-lab/ivar")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"044xa0hm3b8fga64csrdx05ih8w7kwmvcdrdrhkg8j11ml4bi4xv"))))
(build-system gnu-build-system)
(inputs
`(("htslib" ,htslib)
("zlib" ,zlib)))
(native-inputs
`(("autoconf" ,autoconf)
("automake" ,automake)))
(home-page "https://andersen-lab.github.io/ivar/html/")
(synopsis "Tools for amplicon-based sequencing")
(description "iVar is a computational package that contains functions
broadly useful for viral amplicon-based sequencing. ")
(license license:gpl3+)))
(define-public python-pyliftover
(package
(name "python-pyliftover")