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gnu: Add ivar.
* gnu/packages/bioinformatics.scm (ivar): New variable.
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@ -14272,6 +14272,32 @@ (define-public lofreq
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usually ignored by other methods or only used for filtering.")
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(license license:expat)))
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(define-public ivar
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(package
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(name "ivar")
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(version "1.3.1")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/andersen-lab/ivar")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"044xa0hm3b8fga64csrdx05ih8w7kwmvcdrdrhkg8j11ml4bi4xv"))))
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(build-system gnu-build-system)
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(inputs
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`(("htslib" ,htslib)
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("zlib" ,zlib)))
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(native-inputs
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`(("autoconf" ,autoconf)
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("automake" ,automake)))
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(home-page "https://andersen-lab.github.io/ivar/html/")
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(synopsis "Tools for amplicon-based sequencing")
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(description "iVar is a computational package that contains functions
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broadly useful for viral amplicon-based sequencing. ")
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(license license:gpl3+)))
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(define-public python-pyliftover
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(package
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(name "python-pyliftover")
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