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gnu: Add r-clusterprofiler.

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* gnu/packages/bioconductor.scm (r-clusterprofiler): New variable.
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Ricardo Wurmus 2019-03-27 15:45:35 +01:00
parent 9c30cf65d2
commit f8295ee6de
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gnu/packages/bioconductor.scm
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@ -2849,3 +2849,36 @@ (define-public r-enrichplot
interpreting functional enrichment results obtained from ORA or GSEA analyses. interpreting functional enrichment results obtained from ORA or GSEA analyses.
All the visualization methods are developed based on ggplot2 graphics.") All the visualization methods are developed based on ggplot2 graphics.")
(license license:artistic2.0))) (license license:artistic2.0)))
(define-public r-clusterprofiler
(package
(name "r-clusterprofiler")
(version "3.10.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "clusterProfiler" version))
(sha256
(base32
"1v4fh8ll7zk8yhbaa0nq9xvqrb05kyvbpwkqpnjf07s873805rxm"))))
(properties
`((upstream-name . "clusterProfiler")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-dose" ,r-dose)
("r-enrichplot" ,r-enrichplot)
("r-ggplot2" ,r-ggplot2)
("r-go-db" ,r-go-db)
("r-gosemsim" ,r-gosemsim)
("r-magrittr" ,r-magrittr)
("r-plyr" ,r-plyr)
("r-qvalue" ,r-qvalue)
("r-rvcheck" ,r-rvcheck)
("r-tidyr" ,r-tidyr)))
(home-page "https://guangchuangyu.github.io/software/clusterProfiler/")
(synopsis "Analysis and visualization of functional profiles for gene clusters")
(description
"This package implements methods to analyze and visualize functional
profiles (GO and KEGG) of gene and gene clusters.")
(license license:artistic2.0)))