gnu: lsof: Update to 4.98.0

* gnu/packages/lsof.scm (lsof): Update to 4.98.0.
[native-inputs]: Add automake, autoconf, pkg-config, procps and util-linux.
[arguments]<#:phases>: Remove replace configure,install phases. Remove
patch-timestamps,build-man-page phases. Adjust and move disable-failing-tests
to before bootstrap.

Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
Change-Id: I5b381e77f6e6ed89431856f409a5a6e8b9fd765c

gnu/packages/lsof.scm

@@ -27,78 +27,44 @@ (define-module (gnu packages lsof)
   #:use-module (guix build-system gnu)
   #:use-module (guix utils)
   #:use-module (gnu packages)
+  #:use-module (gnu packages autotools)
   #:use-module (gnu packages groff)
-  #:use-module (gnu packages perl))
+  #:use-module (gnu packages perl)
+  #:use-module (gnu packages pkg-config)
+  #:use-module (gnu packages linux))
 
 (define-public lsof
   (package
     (name "lsof")
-    (version "4.94.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/lsof-org/lsof")
-             (commit version)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0yxv2jg6rnzys49lyrz9yjb4knamah4xvlqj596y6ix3vm4k3chp"))
-       (patches (search-patches "lsof-fatal-test-failures.patch"))))
+    (version "4.98.0")
+    (source (origin
+              (method git-fetch)
+              (uri (git-reference
+                    (url "https://github.com/lsof-org/lsof")
+                    (commit version)))
+              (file-name (git-file-name name version))
+              (sha256
+               (base32
+                "0cjmhd01p5a9cy52lirv1rkidrzhyn366f4h212jcf1cmp8xh0hd"))))
     (build-system gnu-build-system)
-    (native-inputs
-     (list groff ; for soelim
-           perl))
+    (native-inputs (list automake
+                         autoconf
+                         groff ;for soelim
+                         perl
+                         pkg-config
+                         procps ;for ps
+                         util-linux)) ;for unshare
     (arguments
-     `(#:phases
-       (modify-phases %standard-phases
-         (replace 'configure
-           (lambda _
-             (setenv "LSOF_CC" ,(cc-for-target))
-             ,@(if (%current-target-system)
-                   '((setenv "LINUX_CONF_CC" "gcc"))
-                   '())
-             (setenv "LSOF_MAKE" "make")
-
-             ;; By default, the makefile captures the output of 'uname -a'.
-             ;; Provide a fixed output instead to make builds reproducible.
-             (setenv "LSOF_SYSINFO"
-                     (string-append "GNU/" (utsname:sysname (uname))
-                                    " (GNU Guix)"))
-
-             (invoke "./Configure" "linux")))
-         (add-after 'configure 'patch-timestamps
-           (lambda _
-             (substitute* "Makefile"
-               (("`date`") "`date --date=@1`"))))
-         (add-after 'build 'build-man-page
-           (lambda _
-             (with-output-to-file "lsof.8"
-               (lambda _ (invoke "soelim" "Lsof.8")))))
-         (add-before 'check 'disable-failing-tests
-           (lambda _
-             (substitute* "tests/Makefile"
-               ;; Fails with ‘ERROR!!! client gethostbyaddr() failure’.
-               (("(STDTST=.*) LTsock" _ prefix) prefix)
-               ;; LTnfs fails without access to a remote NFS server, and LTlock
-               ;; fails when run on a Btrfs file system (see:
-               ;; https://github.com/lsof-org/lsof/issues/152).
-               (("OPTTST=[[:space:]]*LTbigf LTdnlc LTlock LTnfs")
-                "OPTTST = LTbigf LTdnlc"))))
-         (replace 'check
-           (lambda* (#:key tests? #:allow-other-keys)
-             (when tests?
-               (with-directory-excursion "tests"
-                 ;; Tests refuse to run on ‘unvalidated’ platforms.
-                 (make-file-writable "TestDB")
-                 (invoke "./Add2TestDB")
-
-                 ;; The ‘standard’ tests suggest running ‘optional’ ones as well.
-                 (invoke "make" "standard" "optional")))))
-         (replace 'install
-           (lambda* (#:key outputs #:allow-other-keys)
-             (let ((out (assoc-ref outputs "out")))
-               (install-file "lsof" (string-append out "/bin"))
-               (install-file "lsof.8" (string-append out "/share/man/man8"))))))))
+     `(#:phases (modify-phases %standard-phases
+                  (add-before 'bootstrap 'disable-failing-tests
+                    (lambda _
+                      (substitute* "Makefile.am"
+                        ;; Fails with ‘ERROR!!! client gethostbyaddr() failure’.
+                        (("(TESTS \\+=.*) tests/LTsock" _ prefix)
+                         prefix)
+                        ;; Fails because /proc not mounted in sandbox
+                        (("\tdialects/linux/tests/case-20-epoll.bash \\\\")
+                         "\\")))))))
     (synopsis "Display information about open files")
     (description
      "Lsof stands for LiSt Open Files, and it does just that.