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gnu: Add r-basilisk.

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* gnu/packages/bioconductor.scm (r-basilisk): New variable.
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Ricardo Wurmus 2021-09-07 12:08:13 +02:00
parent dde984ca19
commit fd5372e40f
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1 changed files with 28 additions and 0 deletions
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gnu/packages/bioconductor.scm
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@ -13986,6 +13986,34 @@ (define-public r-basilisk-utils
package, primarily for creation of the underlying Conda instance.")
(license license:gpl3)))
(define-public r-basilisk
(package
(name "r-basilisk")
(version "1.4.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "basilisk" version))
(sha256
(base32
"1nzbn3f2jzvg3a3m6wgksi4cvamqas2q7csdk4ir7fcirasf536v"))))
(properties `((upstream-name . "basilisk")))
(build-system r-build-system)
(propagated-inputs
`(("r-basilisk-utils" ,r-basilisk-utils)
("r-dir-expiry" ,r-dir-expiry)
("r-reticulate" ,r-reticulate)))
(native-inputs `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/basilisk")
(synopsis "Freeze Python dependencies inside Bioconductor packages")
(description
"This package installs a self-contained Conda instance that is managed by
the R/Bioconductor installation machinery. This aims to provide a consistent
Python environment that can be used reliably by Bioconductor packages.
Functions are also provided to enable smooth interoperability of multiple
Python environments in a single R session.")
(license license:gpl3)))
(define-public r-tximeta
(package
(name "r-tximeta")