gnu: Add r-breakpointr.

* gnu/packages/bioconductor.scm (r-breakpointr): New variable.
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Mădălin Ionel Patrașcu 2023-01-18 18:35:59 +01:00 committed by Ricardo Wurmus
parent 4f7ef3f528
commit fda2d75d8d
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@ -3500,6 +3500,40 @@ (define-public r-biocgenerics
packages.")
(license license:artistic2.0)))
(define-public r-breakpointr
(package
(name "r-breakpointr")
(version "1.16.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "breakpointR" version))
(sha256
(base32
"0j1f43lhgkapjyxlil9fflqh9nf3andhmvirdcv45y60wvljn4gx"))))
(properties `((upstream-name . "breakpointR")))
(build-system r-build-system)
(propagated-inputs
(list r-biocgenerics
r-breakpointrdata
r-cowplot
r-doparallel
r-foreach
r-genomeinfodb
r-genomicalignments
r-genomicranges
r-ggplot2
r-gtools
r-iranges
r-rsamtools
r-s4vectors))
(native-inputs (list r-knitr))
(home-page "https://github.com/daewoooo/BreakPointR")
(synopsis "Find breakpoints in Strand-seq data")
(description
"This package implements functions for finding breakpoints, plotting and
export of Strand-seq data.")
(license license:expat)))
(define-public r-cardelino
(package
(name "r-cardelino")