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gnu: Add r-breakpointr.
* gnu/packages/bioconductor.scm (r-breakpointr): New variable.
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@ -3500,6 +3500,40 @@ (define-public r-biocgenerics
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packages.")
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packages.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-breakpointr
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(package
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(name "r-breakpointr")
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(version "1.16.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "breakpointR" version))
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(sha256
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(base32
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"0j1f43lhgkapjyxlil9fflqh9nf3andhmvirdcv45y60wvljn4gx"))))
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(properties `((upstream-name . "breakpointR")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-biocgenerics
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r-breakpointrdata
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r-cowplot
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r-doparallel
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r-foreach
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r-genomeinfodb
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r-genomicalignments
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r-genomicranges
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r-ggplot2
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r-gtools
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r-iranges
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r-rsamtools
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r-s4vectors))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/daewoooo/BreakPointR")
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(synopsis "Find breakpoints in Strand-seq data")
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(description
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"This package implements functions for finding breakpoints, plotting and
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export of Strand-seq data.")
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(license license:expat)))
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(define-public r-cardelino
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(define-public r-cardelino
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(package
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(package
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(name "r-cardelino")
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(name "r-cardelino")
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