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136582 commits

Author SHA1 Message Date
Ludovic Courtès
7757fdd491
daemon: Loop over ‘copy_file_range’ upon short writes.
Fixes <https://issues.guix.gnu.org/70877>.

* nix/libutil/util.cc (copyFile): Loop over ‘copy_file_range’ instead of
throwing upon short write.

Reported-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: Id7b8a65ea59006c2d91bc23732309a68665b9ca0
2024-05-13 16:31:34 +02:00
Ricardo Wurmus
be235a3092
gnu: Add r-anndatar.
* gnu/packages/bioinformatics.scm (r-anndatar): New variable.

Change-Id: I6060c5c15a46c064aa03ec2431a72ea88f925706
2024-05-13 16:12:12 +02:00
Christopher Baines
7b0f145802
Use po4a-minimal for guix.
As this avoids the indirect dependency on nss, which has a testsuite that
takes a long time to run.

* gnu/packages/package-management.scm (guix)[native-inputs]: Use po4a-minimal.
* guix/self.scm (%packages, translate-texi-manuals): Use po4a-minimal.

Change-Id: Iac7555cc850c1618d3d54f1b290faa4f9cfb4f8a
2024-05-13 12:01:49 +01:00
Christopher Baines
8fb98fe33b
gnu: Add po4a-minimal.
The main reason is to avoid the texlive-updmap.cfg input indirectly pulling in
nss, which has a very time consuming testsuite.

* gnu/packages/gettext.scm (po4a-minimal): New variable.

Change-Id: If8d46a18a02e57d5427852e8e122de01f970ded4
2024-05-13 12:01:49 +01:00
Christopher Baines
31d1cc82b3
gnu: nss/fixed: Tweak performance test.
As I'm seeing this test fail with results of 5 to 7 seconds.

* gnu/packages/nss.scm (nss/fixed)[arguments]: Tweak a test to have a higher
time threshold.

Change-Id: Icb0551cd986acf67b2ba17dc8772a67b9747d31a
2024-05-13 12:01:46 +01:00
Efraim Flashner
08360a2cd0
gnu: atril: Expand package description.
* gnu/packages/mate.scm (atril)[description]: Expand with the upstream
description.

Change-Id: Ibd142094a5fbb4028613a03da0bd6de75cc9f6fe
2024-05-13 12:38:07 +03:00
Efraim Flashner
ca892fc9ef
gnu: atril: Remove input labels.
* gnu/packages/mate.scm (atril)[native-inputs]: Remove package labels.
[inputs]: Same.

Change-Id: I9bdb69426d4b3285b09310642b881ac9bcee0d47
2024-05-13 12:37:02 +03:00
Tomas Volf
d86b6233d5
gnu: slirp4netns: Update to 1.3.0.
* gnu/packages/containers.scm (slirp4netns): Update to 1.3.0.

Change-Id: I1f9c75a6e3dab996465879cf6734799a8b9e9d53
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-13 09:11:06 +01:00
Jonathan Brielmaier
173420d73c
gnu: gnome-maps: Update to 46.10.
* gnu/packages/geo.scm (gnome-maps): Update to 46.10.
[arguments]: Add phase to setup time zones for a new test.
[native-inputs]: Add libportal and tzdata-for-tests.

Change-Id: Ife9b17eda68662d2adb289acfeacf1dc8f179a46
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-13 09:11:06 +01:00
Jonathan Brielmaier
7db57257d5
gnu: libshumate: Update to 1.2.1.
* gnu/packages/gnome.scm (libshumate): Update to 1.2.1.
[arguments]: Drop `-Dlibsoup3=true` configure flag as it got removed
upstream.  It only supports libsoup3 now.
[native-inputs]: Add gperf.
[propagated-inputs]: Add json-glib and protobuf-c.

Change-Id: Ibe63b6f2060f6684f8f68f44c2221ba9d6ad5a45
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-13 09:11:06 +01:00
kiasoc5
43cd76fa58
gnu: mg: Update to 20230501.
* gnu/packages/text-editors.scm (mg): Update to 20230501.

Change-Id: Ie72901207562488f392d5877e1b41a41067893f4
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-13 09:11:06 +01:00
antlers
0309080ffc
gnu: zfs: Update to 2.2.3.
* gnu/packages/file-systems.scm (zfs): Update to 2.2.3.

Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: If77ba25fe98603d79fd08623ce12a9fa916bae43
2024-05-13 09:11:06 +01:00
Andy Tai
0b3f2f28c6
gnu: llama-cpp: Update to 0.0.0-2.fed0108.
As last update was in February and new changes for new models and memory leaks
fixes since then.

* gnu/packages/machine-learning.scm (llama-cpp): Update to 0.0.0-2.fed0108.
[arguments]<#:phases>: Add 'disable-unrunable-tests' phase.  Change
replacement of 'install to be a post-install 'install-main' phase so libraries
and header files are normally installed.

Change-Id: Ia6532945f588747c4d58fdb7611d6a9c3c596705
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-13 09:11:06 +01:00
Andy Tai
cc212af83e
gnu: opensycl: Rename to adaptivecpp and update to 24.02.0.
* gnu/packages/sycl.scm (adaptivecpp): New variable.
(opensync): Redefine using DEPRECATED-PACKAGE.

Change-Id: I7ac3f49409d539962de34510ed9255021b795724
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-13 09:11:06 +01:00
Rostislav Svoboda
e5fa18b628
guix: channels: Handle single case with authenticating message.
* guix/channels.scm (authenticate-channel): Handle single case with
authenticating message.

Change-Id: I7759607f37405e6d3bd4b7f5958fd11d908db204
Reviewed-by: Dale Mellor <guix-devel-0brg6a@rdmp.org>
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-13 09:11:05 +01:00
Christopher Baines
63dfce508a
gnu: guix-data-service: Update to 0.0.1-49.f4be647.
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-49.f4be647.

Change-Id: I874df868fed2d22dd1bb8c696a55d8396581b9a6
2024-05-13 09:11:05 +01:00
Christopher Baines
034306b3b7
gnu: nar-herder: Update to 0-31.0e89dbb.
* gnu/packages/package-management.scm (nar-herder): Update to 0-31.0e89dbb.

Change-Id: Ia238baa6bd835d3fa8ea81d1f0a12c3fee333973
2024-05-13 09:11:05 +01:00
Christopher Baines
4f45bf4e94
gnu: guix-build-coordinator: Update to 0-103.ff81428.
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-103.ff81428.

Change-Id: I91cb97a69c2650efa35291cfab724b4e80007e06
2024-05-13 09:11:05 +01:00
Efraim Flashner
109679cdfa
Revert "gnu: python-xcffib: Update to 1.4.0."
This reverts commit 56980ea500.

This package includes files which need to be bootstrapped, to produce
the bindings matching our version of libxcb.
2024-05-13 11:00:00 +03:00
Efraim Flashner
ed3f818b15
gnu: alfa: Reuse 'check phase.
* gnu/packages/astronomy.scm (alfa)[arguments]: Set test-target. Replace
custom 'post-install-check phase with the standard 'check phase.

Change-Id: Ic5f77ac3a3a6ef62ce36ad5fa8892db6d0894d04
2024-05-13 10:52:54 +03:00
Efraim Flashner
a0221c3424
gnu: alfa: Skip tests when cross compiling.
* gnu/packages/astronomy.scm (alfa)[arguments]: Also skip tests when
cross compiling.

Change-Id: Ie96b418a652feff6b4dfc79ffcac9d0f1900fce5
2024-05-13 10:50:12 +03:00
Danny Milosavljevic
6ba29e0210
gnu: Add tree-sitter-awk.
* gnu/packages/tree-sitter.scm (tree-sitter-awk): New variable.

Change-Id: Iba10ae4fc9f8f86d43a0db256d645239be2fa8fc
2024-05-12 23:22:48 +02:00
Danny Milosavljevic
6957a9c336
gnu: Add tree-sitter-kotlin.
* gnu/packages/tree-sitter.scm (tree-sitter-kotlin): New variable.

Change-Id: Id29bf5097a4950bdc6a4509eeb7bb8c411064169
2024-05-12 23:22:43 +02:00
Wilko Meyer
89cd778f6a
gnu: Add python-overpass.
* gnu/packages/geo.scm (python-overpass): New variable.

Change-Id: Icd7a66ec6acd2e213bfd6920a1d71c1e0e815695
Signed-off-by: Andreas Enge <andreas@enge.fr>
2024-05-12 20:40:29 +02:00
Christopher Baines
7b2e7ff25a
gnu: ruby-gem-hadar: Use git-minimal/pinned.
This helps reduce the dependencies on git, as I think it's find to build
ruby-gem-hadar with a slightly older git, at least during periods when
git-minimal/pinned needs updating.

* gnu/packages/ruby.scm (ruby-gem-hadar)[propagated-inputs]: Use
git-minimal/pinned.

Change-Id: I48e7725f8e4956f1a8311df1867d8d441c5cb4c2
2024-05-12 18:58:17 +01:00
Christopher Baines
418710ccc0
gnu: alfa: Don't run tests on riscv64-linux.
As the test suite seems to consume all the disk space.

* gnu/packages/astronomy.scm (alfa)[arguments]: Don't run tests on riscv64.

Change-Id: Ifa52b8205387c22b386ccad97fd6e69723193a16
2024-05-12 18:55:51 +01:00
Andy Tai
8b81fae667
gnu: adns: Update to 1.6.1.
* gnu/packages/adns.scm (adns): Update to 1.6.1.

Change-Id: I1e6d42ab558bba55895efd39d7bb4cd9e5ee7b99
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:55:27 +01:00
Suhail Singh
3843820d5d
gnu: emacs-eldev: Update to 1.10.
* gnu/packages/emacs-xyz.scm (emacs-eldev): Update to 1.10.

Change-Id: Iafaf10e545920b424fc709def4ebfc6c831cf76f
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:51:15 +01:00
Andy Tai
8643bb4a82
gnu: nano: Update to 8.0.
* gnu/packages/text-editors.scm (nano): Update to 8.0.

Change-Id: I2312dd5140fee4d8cc42f622f733c616d7b39550
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:50:57 +01:00
Picnoir
986ee0c66c
doc: Update NixOS wiki url to the official wiki.
nixos.wiki was created by a community member a long time ago. It turned out to
be very useful to the community, it became an official service last month
hosted on the NixOS.org domain name. To ease the long term maintainance among
other things.

See more details at https://github.com/NixOS/foundation/issues/113

* doc/guix.texi (Nix service): Change nixos.wiki to wiki.nixos.org.

Change-Id: Ia95074fbfad494e8ceb5c2cdb3faab23f3604882
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:49:04 +01:00
Fredrik Salomonsson
069e4d86b8
gnu: emacs-suneater-theme: Update to 2.5.2.
* gnu/packages/emacs-xyz.scm (emacs-suneater-theme): Update to 2.5.2.

Change-Id: I09ddb510e59d461b7f383a400ef8b7cfbeb19714
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:47:08 +01:00
Frank Terbeck
d2b9736c5e
gnu: guile-tap: Update to 0.5.1.
* gnu/packages/guile-xyz.scm (guile-tap): Update to 0.5.1.
[arguments]: Patch bin/tap-harness.

Change-Id: Ia8a02400f1d559fcec7eb9861f24a7116928814b
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:43:18 +01:00
Giacomo Leidi via Guix-patches via
ca571f4259
gnu: Add python-vdf.
* gnu/packages/python-xyz.scm (python-vdf): New variable.

Reviewed-by: Steve George <steve@futurile.net>
Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: Ie8a14292b9c9937d22f011ac078562e81abd6b36
2024-05-12 18:40:33 +01:00
Ashish SHUKLA
0dac1307cc
gnu: tmux: Update to 3.4.
* gnu/packages/tmux.scm (tmux): Update to 3.4.
[native-inputs]: Add bison.

Reviewed-by: Dale Mellor <guix-devel-0brg6a@rdmp.org>
Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: I549010a3cf492ffe9cdc9df25b2b4a93c60c6ae1
2024-05-12 18:31:25 +01:00
Juliana Sims
0eaae8e4d4
gnu: Add m8c.
* gnu/packages/electronics.scm (m8c): New variable.

Change-Id: Ibfc2e9364211e24c59d4d9015ab144f0c4ee972c
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:29:30 +01:00
Efraim Flashner
56980ea500
gnu: python-xcffib: Update to 1.4.0.
* gnu/packages/python-xyz.scm (python-xcffib): Update to 1.4.0.
[arguments]: Remove obsolete 'install-doc phase.  Remove trailing #t
from phases.

Change-Id: I1b68ddffb2620938042384b9b9a0d444ad05bb0a
2024-05-12 10:53:35 +03:00
Efraim Flashner
60e9765729
gnu: gnome-js-common: Fix build on powerpc64le-linux.
* gnu/packages/gnome.scm (gnome-js-common)[arguments]: Replace the
config.guess and config.sub files when building for powerpc64le-linux.
[native-inputs]: Add config when building for powerpc64le-linux.

Change-Id: If0cf8fff36347f6bd52b8cf1f43a11fc7f5323b7
2024-05-12 10:00:00 +03:00
Efraim Flashner
43370c2db3
gnu: strongswan: Skip rsa test on i686-linux.
* gnu/packages/vpn.scm (strongswan)[arguments]: Adjust custom
'set-up-test-environment phase to skip the rsa tests on i686-linux.

Change-Id: If4aff3f710f2eb4e0dfbad58deb41838421db89f
2024-05-12 10:00:00 +03:00
Efraim Flashner
39059b9390
gnu: minimap2: Remove included file from gcc.
* gnu/packages/bioinformatics.scm (minimap2)[arguments]: Adjust custom
'install phase to remove included emmintrin.h header.

Change-Id: Id994dd2bd4a98e8d1c162c4e011fc77b9d5565d2
2024-05-12 09:59:55 +03:00
Vinicius Monego
2793a79117
gnu: python-scikit-image: Update to 0.23.2.
* gnu/packages/python-science.scm (python-scikit-image): Update to 0.23.2.

Change-Id: Ief01a2aef5202dd859f9337a45105088d605509e
2024-05-11 18:44:47 -03:00
Vinicius Monego
4a49457995
gnu: meep: Update to 1.28.0.
* gnu/packages/engineering.scm (meep): Update to 1.28.0.
[arguments]: Use G-Expressions.
[native-inputs, inputs]: Use package labels.

Change-Id: I98c867645bb7e052a4b909753bc150c4c25d1638
2024-05-11 18:11:04 -03:00
Vinicius Monego
86c896c12e
gnu: python-kombu: Update to 5.3.7.
* gnu/packages/python-xyz.scm (python-kombu): Update to 5.3.7.

Change-Id: I6bfb3e4bb508d5003f5db45d1d8d35bd6b15064f
2024-05-11 16:13:52 -03:00
Vinicius Monego
38d3e90abe
gnu: python-osmnx: Update to 1.9.3.
* gnu/packages/geo.scm (python-osmnx): Update to 1.9.3.

Change-Id: I43cfa856ff146b1d699cb3ec6490515ac95a27d5
2024-05-11 16:13:52 -03:00
Vinicius Monego
27664208e3
gnu: python-folium: Update to 0.16.0.
* gnu/packages/python-xyz.scm (python-folium): Update to 0.16.0.
[build-system]: Use pyproject-build-system.
[arguments]<#:test-flags>: Skip failing tests.
<#:phases>: Add phase 'pretend-version.
[propagated-inputs]: Add python-xyzservices.
[native-inputs]: Add python-geopandas, python-nbconvert, python-pandas,
python-pillow, python-selenium, python-setuptools-scm.

Change-Id: I93db72f62306c8db2a069733b49ac0933c8888ce
2024-05-11 16:13:52 -03:00
Vinicius Monego
a0339072b6
gnu: python-branca: Update to 0.7.2.
* gnu/packages/python-web.scm (python-branca): Update to 0.7.2.
[source]: Fetch from GitHub.
[build-system]: Use pyproject-build-system.
[arguments]<#:test-flags>: Ignore a file and skip one test.
<#:phases>: Add phase 'pretend-version.
[propagated-inputs]: Remove python-six.
[native-inputs]: Add python-numpy, python-setuptools-scm.
[description]: Improve it.

Change-Id: I0263797b69fc437b2a268b5d03c211d76e2963c3
2024-05-11 16:13:45 -03:00
Vinicius Monego
6f595eca59
gnu: Add python-botorch.
* gnu/packages/machine-learning.scm (python-botorch): New variable.

Change-Id: Iaa67584a3b72ff07bc8bbb92cfa60fde1d9d7647
2024-05-11 15:35:36 -03:00
Vinicius Monego
43e790f4c9
gnu: kdenlive: Update to 24.02.2.
* gnu/packages/kde.scm (kdenlive): Update to 24.02.2.

Change-Id: Ib7c50ca2413add01807e792da967108f66fed852
2024-05-11 14:24:49 -03:00
Vinicius Monego
0680eadf3b
gnu: mlt: Update to 7.24.0.
* gnu/packages/video.scm (mlt): Update to 7.24.0.

Change-Id: If04fd8aa6db07caa3f5b2a72102b6b93c929b766
2024-05-11 14:24:49 -03:00
Vinicius Monego
30fe006a0b
gnu: python-scikit-rf: Update to 1.0.0.
* gnu/packages/engineering.scm (python-scikit-rf): Update to 1.0.0.

Change-Id: I95a3433a365b89ec0f3b641415368823d238244b
2024-05-11 14:24:49 -03:00
Vinicius Monego
6fa742ab31
gnu: python-hy: Update to 0.28.0.
* gnu/packages/python-xyz.scm (python-hy): Update to 0.28.0.
[native-inputs]: Replace python-pytest with python-pytest-next.

Change-Id: I6f465a9c834aea51fd0363ba27f9b0ff7b98e82b
2024-05-11 14:24:49 -03:00