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Author SHA1 Message Date
Ricardo Wurmus
939b6b113b
gnu: star: Update to 2.5.3a. 
* gnu/packages/bioinformatics.scm (star): Update to 2.5.3a.
 2017-03-23 11:21:08 +01:00
Tobias Geerinckx-Rice
b27bd0b057
gnu: youtube-dl: Update to 2017.03.22. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.03.22.
 2017-03-23 02:53:18 +01:00
Tobias Geerinckx-Rice
a06cd95ab0
gnu: python-natsort: Update to 5.0.2. 
* gnu/packages/python.scm (python-natsort): Update to 5.0.2.
 2017-03-23 02:53:17 +01:00
Tobias Geerinckx-Rice
e17a12482b
gnu: python2-futures: Update to 3.0.5. 
* gnu/packages/python.scm (python2-futures): Update to 3.0.5.
 2017-03-23 02:53:17 +01:00
Tobias Geerinckx-Rice
06fe79f263
gnu: python-rauth: Update to 0.7.3. 
* gnu/packages/python.scm (python-rauth): Update to 0.7.3.
 2017-03-23 02:53:17 +01:00
Tobias Geerinckx-Rice
36e0d9db90
gnu: python-ipaddress: Update to 1.0.18. 
* gnu/packages/python.scm (python-ipaddress): Update to 1.0.18.
 2017-03-23 02:53:16 +01:00
Tobias Geerinckx-Rice
543782e1ff
gnu: python-appdirs: Update to 1.4.3. 
* gnu/packages/python.scm (python-appdirs): Update to 1.4.3.
 2017-03-23 02:53:16 +01:00
Tobias Geerinckx-Rice
80e8d8517a
gnu: python-beautifulsoup4: Update to 4.5.3. 
* gnu/packages/python.scm (python-beautifulsoup4): Update to 4.5.3.
 2017-03-23 02:53:15 +01:00
Tobias Geerinckx-Rice
7c4279322e
gnu: python-drmaa: Update to 0.7.7. 
* gnu/packages/python.scm (python-drmaa): Update to 0.7.7.
 2017-03-23 02:53:15 +01:00
Tobias Geerinckx-Rice
fd2662e950
gnu: python-sqlalchemy-utils: Update to 0.32.13. 
* gnu/packages/python.scm (python-sqlalchemy-utils): Update to 0.32.13.
 2017-03-23 02:53:15 +01:00
Tobias Geerinckx-Rice
745d85b7db
gnu: python-pafy: Update to 0.5.3.1. 
* gnu/packages/python.scm (python-pafy): Update to 0.5.3.1.
 2017-03-23 02:53:14 +01:00
Efraim Flashner
283f04b053
gnu: libffcall: Set source file-name. 
* gnu/packages/libffcall.scm (libffcall)[source]: Add file-name field.
[home-page]: Use https.
 2017-03-22 22:36:43 +02:00
Kei Kebreau
359e9c4215
gnu: chicken: Update to 4.12.0. 
* gnu/packages/scheme.scm (chicken): Update to 4.12.0.
 2017-03-22 15:31:17 -04:00
Leo Famulari
112d645ffa
gnu: dovecot: Update to 2.2.28. 
* gnu/packages/mail.scm (dovecot): Update to 2.2.28.
 2017-03-22 13:04:29 -04:00
Danny Milosavljevic
9b7a9580d4
gnu: rustc: Honor max line length. 
* gnu/packages/rust.scm (rustc)[arguments]: patch-tests: Honor max line
length.
 2017-03-22 17:41:44 +01:00
Ludovic Courtès
61a3137bdd
gnu: guix: Update development snapshot. 
* gnu/packages/package-management.scm (guix-devel): Update to 73a4645.
 2017-03-22 16:05:46 +01:00
Efraim Flashner
493ae57eca
gnu: binutils-vc4: Set source file-name. 
* gnu/packages/embedded.scm (binutils-vc4)[source]: Add file-name field.
 2017-03-22 16:10:45 +02:00
Ludovic Courtès
73a46451af
build: 'test-driver.scm' prints Scheme values with 'write'. 
Previously it would print them with 'display', which was inconvenient.

* build-aux/test-driver.scm (test-display): Use ~S for VALUE.
(test-runner-gnu): Use 'format' instead of 'test-display' for the test
name, location, and result kind.
 2017-03-22 15:02:33 +01:00
Ludovic Courtès
50b4d3ac26
tests: Skip 'guix pack' test when networking is unavailable. 
* tests/pack.scm ("self-contained-tarball"): Skip unless (network-reachable?).
 2017-03-22 15:02:33 +01:00
Ludovic Courtès
ed407f3ccc
tests: Fix 'cond-expand' clause for 2.2/2.0. 
Fixes a mistake in a9a0227c01.

* tests/store.scm ("current-build-output-port, UTF-8 + garbage"):
Inverse the 'cond-expand' clauses since the 'guile-2.0' feature doesn't
exist.
 2017-03-22 15:02:33 +01:00
Efraim Flashner
aeb6fe5fa0
gnu: autoconf-archive: Update to 2017.03.21. 
* gnu/packages/autotools.scm (autoconf-archive): Update to 2017.03.21.
 2017-03-22 15:35:59 +02:00
Ludovic Courtès
4bb5e0aeb3
publish: Add '--nar-path'. 
* guix/scripts/publish.scm (show-help, %options): Add '--nar-path'.
(%default-options): Add 'nar-path'.
(guix-publish): Honor it.
 2017-03-22 14:05:59 +01:00
Ludovic Courtès
cdd7a7d210
publish: Make the nar URL prefix a parameter. 
* guix/scripts/publish.scm (narinfo-string): Add #:nar-path and honor it.
(render-narinfo): Likewise.
(make-request-handler): Likewise.
(run-publish-server): Likewise.
* tests/publish.scm ("custom nar path"): New test.
 2017-03-22 14:05:59 +01:00
Ludovic Courtès
46f58390cb
publish: Add '--public-key' and '--private-key'. 
* guix/scripts/publish.scm (show-help, %options): Add --public-key and
--private-key.
* doc/guix.texi (Invoking guix publish): Document it.
 2017-03-22 14:05:59 +01:00
Ludovic Courtès
ab2a74e4db
publish: The public and private keys are now SRFI-39 parameters. 
* guix/scripts/publish.scm (%default-options): Add 'public-key-file' and
'private-key-file'.
(lazy-read-file-sexp): Remove.
(%private-key, %public-key): Turn into SRFI-39 parameters.
(signed-string, render-narinfo): Adjust accordingly.
(guix-publish): Honor 'public-key-file' and 'private-key-file' from
OPTS.  Use 'parameterize'.
* guix/pk-crypto.scm (read-file-sexp): New procedure.
* tests/publish.scm: Initialize '%public-key' and '%private-key'.
 2017-03-22 14:05:59 +01:00
Ludovic Courtès
5cd074ea32
gnu: guile: Add 'guile-next' as a deprecated alias. 
This is a followup to f6396d862f.

* gnu/packages/guile.scm (guile-next): New variable.
 2017-03-22 14:05:58 +01:00
Danny Milosavljevic
326249bab8
gnu: rustc: End resultless phases in #t. 
* gnu/packages/rust.scm (rustc): End resultless phases in #t.
 2017-03-22 12:59:32 +01:00
Ricardo Wurmus
54262c5435
gnu: python-pysam: Run tests in parallel. 
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Run nose tests in
parallel.
 2017-03-22 12:33:28 +01:00
Ricardo Wurmus
71dbf592c4
gnu: python-pysam: Run tests before installation. 
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Adjust check
phase to be run before installation.
 2017-03-22 12:33:28 +01:00
Ricardo Wurmus
879b521cd0
gnu: python-pysam: Update to 0.10.0. 
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.10.0.
 2017-03-22 12:33:24 +01:00
Efraim Flashner
0e7c3ba1c0
gnu: perl-mojolicious: Update to 7.29. 
* gnu/packages/perl-web.scm (perl-mojolicious): Update to 7.29.
 2017-03-22 12:56:23 +02:00
Efraim Flashner
c70b50efb9
gnu: perl-io-compress: Update to 2.074. 
* gnu/packages/compression.scm (perl-io-compress): Update to 2.074.
[propagated-inputs]: Update minimum versions to 2.074.
 2017-03-22 12:50:36 +02:00
Efraim Flashner
c0b7b797a2
gnu: perl-compress-raw-bzip2: Update to 2.074. 
* gnu/packages/compression.scm (perl-compress-raw-bzip2): Update to 2.074.
 2017-03-22 12:45:55 +02:00
Efraim Flashner
02b067d782
gnu: perl-compress-raw-zlib: Update to 2.074. 
* gnu/packages/compression.scm (perl-compress-raw-zlib): Update to 2.074.
 2017-03-22 12:40:05 +02:00
Leo Famulari
d8be338f16
gnu: openssh: Update to 7.5p1. 
* gnu/packages/ssh.scm (openssh): Update to 7.5p1.
 2017-03-22 02:37:31 -04:00
Leo Famulari
22f25392cf
gnu: ntp: Update to 4.2.8p10 [security fixes]. 
Fixes CVE-2016-9042 and CVE-2017-{6451,6452,6455,6458,6459,6460,6462,6463,6464}
and others. See 'NEWS' in the source code for more information.

* gnu/packages/ntp.scm (ntp): Update to 4.2.8p10.
 2017-03-22 01:41:41 -04:00
Tobias Geerinckx-Rice
8e71896340
gnu: python-psycopg2: Update to 2.6.2. 
* gnu/packages/python.scm (python-psycopg2): Update to 2.6.2.
 2017-03-22 02:03:35 +01:00
Tobias Geerinckx-Rice
35e1a0f1a7
gnu: python-zope-component: Update to 4.3.0. 
* gnu/packages/python.scm (python-zope-component): Update to 4.3.0.
[source]: Use pypi-uri.
 2017-03-22 02:03:35 +01:00
Tobias Geerinckx-Rice
c56ad5e291
gnu: python-atomicwrites: Update to 1.1.5. 
* gnu/packages/python.scm (python-atomicwrites): Update to 1.1.5.
 2017-03-22 02:03:34 +01:00
Tobias Geerinckx-Rice
4c4d4df393
gnu: python-texttable: Update to 0.8.7. 
* gnu/packages/python.scm (python-texttable): Update to 0.8.7.
 2017-03-22 02:03:34 +01:00
Tobias Geerinckx-Rice
d5c183d134
gnu: python-feedgenerator: Update to 1.9. 
* gnu/packages/python.scm (python-feedgenerator): Update to 1.9.
 2017-03-22 02:03:34 +01:00
Tobias Geerinckx-Rice
d25bee2600
gnu: python-wrapt: Update to 1.10.8. 
* gnu/packages/python.scm (python-wrapt): Update to 1.10.8.
[source]: Use pypi-uri.
 2017-03-22 02:03:33 +01:00
Tobias Geerinckx-Rice
b9463fdba2
gnu: python-py: Update to 1.4.32. 
* gnu/packages/python.scm (python-py): Update to 1.4.32.
 2017-03-22 02:03:33 +01:00
Tobias Geerinckx-Rice
5095bc7d71
gnu: python-sphinx-cloud-sptheme: Update to 1.8.0. 
* gnu/packages/python.scm (python-sphinx-cloud-sptheme): Update to 1.8.0.
 2017-03-22 02:03:33 +01:00
Tobias Geerinckx-Rice
9e59478f8d
gnu: python-wcwidth: Update to 0.1.7. 
* gnu/packages/python.scm (python-wcwidth): Update to 0.1.7.
[source]: Use pypi-uri.
 2017-03-22 02:03:32 +01:00
Tobias Geerinckx-Rice
4ffbe8c6d7
gnu: python-markdown: Update to 2.6.8. 
* gnu/packages/python.scm (python-markdown): Update to 2.6.8.
 2017-03-22 02:03:32 +01:00
Tobias Geerinckx-Rice
2d431b0130
gnu: dns: Return #t instead of something undefined. 
* gnu/packages/dns.scm (yadifa, knot)[arguments]: Return #t after calling
‘substitute*’.
(knot)[source]: Return #t after calling ‘delete-file-recursively’.
 2017-03-22 02:03:31 +01:00
Ludovic Courtès
7dbd75b3cf
file-systems: Add missing docstring. 
* gnu/system/file-systems.scm (file-system-type-predicate): Add
docstring.
 2017-03-21 22:33:07 +01:00
Ludovic Courtès
278d486b0c
file-systems: Do not use (gnu packages …). 
Fixes a regression introduced in
7208995426 whereby (gnu system
file-systems) would pull in (gnu packages …) module, which in turn
breaks when importing things like (gnu build shepherd).

* gnu/system/file-systems.scm (file-system-type-predicate): Export.
(file-system-packages): Move to...
* gnu/system/linux-initrd.scm (file-system-packages): ... here.  Add
docstring.
* gnu/services/base.scm: Use it.
* tests/file-systems.scm ("does not pull (gnu packages …)"): New test.
 2017-03-21 22:33:07 +01:00
Efraim Flashner
4f7a9e0bff
gnu: vapoursynth: Update to 37. 
* gnu/packages/video.scm (vapoursynth): Update to 37.
 2017-03-21 22:36:33 +02:00