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Author SHA1 Message Date
Ben Woodcroft
2a2eb07d87
gnu: ruby-http-cookie: Update to 1.0.3. 
* gnu/packages/ruby.scm (ruby-http-cookie): Update to 1.0.3.
 2016-11-07 21:33:41 +10:00
Ben Woodcroft
420fdfef9a
gnu: ruby-sequel: Update to 4.40.0. 
* gnu/packages/ruby.scm (ruby-sequel): Update to 4.40.0.
 2016-11-07 21:32:32 +10:00
Ben Woodcroft
3cf7c31720
gnu: diamond: Update to 0.8.26. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.26.
 2016-11-07 21:31:09 +10:00
Thomas Danckaert
bd9174860c
gnu: texmaker: Use modular qt and qtwebkit. 
* gnu/packages/tex.scm (texmaker)[inputs]: Use modular qt and qtwebkit.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-11-07 10:18:22 +01:00
Thomas Danckaert
47e1d280d5
gnu: Add qtwebkit. 
* gnu/packages/qt.scm (qtwebkit): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-11-07 10:18:22 +01:00
Efraim Flashner
fbc44ef2cd
gnu: nano: Update to 2.7.1. 
* gnu/packages/nano.scm (nano): Update to 2.7.1.
[home-page]: Use https.
 2016-11-07 07:55:01 +02:00
Leo Famulari
14ac8e4865
gnu: jansson: Update to 2.9. 
* gnu/packages/web.scm (jansson): Update to 2.9.
[source]: Remove 'jansson-CVE-2016-4425.patch'.
* gnu/packages/patches/jansson-CVE-2016-4425.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-06 19:50:30 -05:00
Ludovic Courtès
fd68cc2c8b
gnu: ghostscript: Add 'upstream-name' property. 
This allows 'guix refresh' to do the right thing.

* gnu/packages/ghostscript.scm (ghostscript)[properties]: New field.
 2016-11-06 23:52:32 +01:00
Leo Famulari
2ad0240c56
gnu: acme-client: Update to 0.1.14. 
* gnu/packages/tls.scm (acme-client): Update to 0.1.14.
 2016-11-06 15:58:22 -05:00
Marius Bakke
a95403876e
gnu: vim: Update to 8.0.0069. 
* gnu/packages/vim.scm (vim): Update to 8.0.0069.
 2016-11-06 20:44:43 +00:00
Efraim Flashner
63d8f08fbf
gnu: qtmultimedia: Remove bundled library. 
* gnu/packages/qt.scm (qtmultimedia)[source]: Remove bundled library.
 2016-11-06 22:25:11 +02:00
Efraim Flashner
c04854da93
gnu: qtimageformats: Remove bundled libraries. 
* gnu/packages/qt.scm (qtimagesformats)[source]: Remove bundled 3rd
party libraries.
 2016-11-06 22:25:11 +02:00
Danny Milosavljevic
26d07efb79
gnu: python-sqlalchemy-utils: Use python-pytest. 
* gnu/packages/python.scm (python-sqlalchemy-utils)[native-inputs]: Add
python-pytest.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-06 19:53:15 +00:00
Danny Milosavljevic
c22b4f87c2
gnu: python-sqlalchemy-utils: Propagate existing inputs. 
* gnu/packages/python.scm (python-sqlalchemy-utils)[inputs]: Move to ...
[propagated-inputs]: ... here.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-06 19:53:14 +00:00
Danny Milosavljevic
462bf27157
gnu: Add python-flask-babel. 
* gnu/packages/python.scm (python-flask-babel, python2-flask-babel):
  New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-06 19:53:14 +00:00
Danny Milosavljevic
9dede065ba
gnu: Add python-furl. 
* gnu/packages/python.scm (python-furl, python2-furl): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-06 19:53:14 +00:00
Danny Milosavljevic
b91912c42a
gnu: Add python-orderedmultidict. 
* gnu/packages/python.scm (python-orderedmultidict, python2-orderedmultidict):
  New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-06 19:53:13 +00:00
Danny Milosavljevic
4a0933307e
gnu: Add python-pycodestyle. 
* gnu/packages/python.scm (python-pycodestyle, python2-pycodestyle):
  New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-06 19:53:13 +00:00
John Darrington
290ad2243c
gnu: Remove comment which is factually incorrect. 
* gnu/system/pam.scm: Remove incorrect comment.
 2016-11-06 19:56:43 +01:00
Chris Marusich
1e17a2d5f2
install: Extract procedure: install-grub-config. 
* gnu/build/install.scm (install-grub-config): New procedure.
(install-grub): Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-11-06 18:08:53 +01:00
Chris Marusich
3382bfe9ea
system: Avoid using device paths in <menu-entry> device field. 
This fixes a regression introduced by
1ef8b72a7f, in which we would incorrectly use a
device path in a label-based grub root search command, e.g. 'search --label
--set /dev/sda4'.

* gnu/system.scm (grub-device): New procedure.
(operating-system-grub.cfg, operating-system-parameters-file): Use it.
(read-boot-parameters): Handle device paths correctly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-11-06 18:08:46 +01:00
Marius Bakke
f4dc22bcd9
gnu: nmap: Update to 7.31. 
* gnu/packages/admin.scm (nmap): Update to 7.31.
[arguments]: Add phase 'patch-Makefile' to prevent lua from being built.
 2016-11-06 16:17:29 +00:00
Marius Bakke
331ef882ff
gnu: wireshark: Use lua-5.2. 
* gnu/packages/networking.scm (wireshark)[inputs]: Change from 'lua' to
'lua-5.2'.
 2016-11-06 16:17:27 +00:00
Marius Bakke
6dbf1fec0d
gnu: lua: Update to 5.3.3. 
* gnu/packages/patches/lua52-liblua-so.patch: Rename to ...
* gnu/packages/patches/lua-liblua-so.patch: ... this. Add version comment.
* gnu/local.mk (dist_patch_DATA): Adjust patch name.
* gnu/packages/lua.scm (lua): Update to 5.3.3.
[source]: Use https URL. Use new patch name.
[home-page]: Use https URL.
(lua-5.2): New variable.
(lua-5.1)[source]: Use https URL.
 2016-11-06 16:17:16 +00:00
ng0
de975de39b
gnu: build: file-system: Change url of LUKS specification. 
* gnu/build/file-system.scm: Change url of LUKS specification.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-11-06 14:35:36 +02:00
ng0
f0badf98d7
gnu: pingus: Update upstream location. 
* gnu/packages/games.scm (pingus)[source]: Update source uri.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-11-06 14:35:33 +02:00
ng0
73ea83f517
gnu: r-proto: Update project's home-page. 
* gnu/packages/statistics.scm (r-proto)[home-page]: Update project's home-page.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-11-06 14:35:21 +02:00
Hartmut Goebel
fab959d308
gnu: java-hamcrest-core: Fix build. 
Since we now remove the directory "lib" from the source, we need to
create a directory where build.xml searches for .jar-files.

* gnu/packages/java.scm (java-hamcrest-core)[pahases]: New phase
  create-dummy-directories.
 2016-11-06 11:49:12 +01:00
Hartmut Goebel
e5213cd63b
gnu: java-hamcrest-core: Remove wrong source file-name. 
The sources file-name was set to "java-hamcrest-core", while it contains
not only the "core" but all of hamcrest. Further the source archive
already has the correct name.

* gnu/packages/java.scm (java-hamcrest-core)[source]: Remove file-name.
 2016-11-06 10:55:08 +01:00
Hartmut Goebel
006728966a
gnu: java-hamcrest-core: Update upstream location. 
The checksum changed since the new location's archive contains no
jar-files (except those of external libraries) and line endings are
different.

* gnu/packages/java.scm (java-hamcrest-core)[source]: Update source
  uri and checksum. [snippet]: Remove directory "lib" completely.
 2016-11-06 10:42:57 +01:00
Efraim Flashner
937bc2d137
gnu: bullet: Update to 2.85.1. 
* gnu/packages/game-development.scm (bullet): Update to 2.85.1.
[source]: Change to new Github url.
[arguments]: Enable tests, build shared libraries.
[inputs]: Add glu, libx11, mesa.
 2016-11-06 10:30:18 +02:00
Mark H Weaver
7f4658983a
gnu: epiphany: Update to 3.22.1. 
* gnu/packages/gnome.scm (epiphany): Update to 3.22.1.
 2016-11-06 02:55:52 -05:00
Efraim Flashner
569fc290b3
gnu: ibus: Update to 1.5.14. 
* gnu/packages/ibus.scm (ibus): Update to 1.5.14.
[arguments]: Disable emojis.
[inputs]: Add json-glib.
[home-page]: Use project's new home-page.
 2016-11-05 23:23:37 +02:00
Efraim Flashner
7acc2a3eb3
gnu: libkate: Update upstream location. 
* gnu/packages/xiph.scm (libkate)[source]: Update source uri.
[home-page]: Update project's home-page.
 2016-11-05 23:23:36 +02:00
ng0
2c62b31619
gnu: w3m: Fix the commit string. 
* gnu/packages/w3m.scm (w3m)[source]: Fix the commit string.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-11-05 17:12:24 -04:00
Leo Famulari
683cdbf51b
gnu: python-axolotl-curve25519: Fix license. 
* gnu/packages/python.scm (python-axolotl-curve25519,
python2-axolotl-curve25519)[license]: Replace ISC with BSD-3.
 2016-11-05 16:34:14 -04:00
Arun Isaac
06ff083754
gnu: Add python-axolotl. 
* gnu/packages/python.scm (python-axolotl, python2-axolotl): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-11-05 16:32:19 -04:00
Arun Isaac
2f6dd9cdef
gnu: Add python-axolotl-curve25519. 
* gnu/packages/python.scm (python-axolotl-curve25519,
  python2-axolotl-curve25519): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-11-05 16:32:15 -04:00
Leo Famulari
2d125a9b21
gnu: weex: Update to 2.8.2 [fixes CVE-2005-3150]. 
* gnu/packages/ftp.scm (weex): Update to 2.8.2.
[source]: Use new URL. Remove obsolete 'weex-vacopy.patch'.
[arguments]: Remove custom 'configure' phase and add 'bootstrap' phase.
[native-inputs]: Add autoconf, automake, and gnu-gettext.
* gnu/packages/patches/weex-vacopy.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-05 13:31:44 -04:00
Efraim Flashner
268b3802e9
gnu: whois: Update to 5.2.13. 
* gnu/packages/networking.scm (whois): Update to 5.2.13.
 2016-11-05 17:46:55 +02:00
Efraim Flashner
0cee33ac96
gnu: gst-plugins-bad: Update to 1.10.0. 
* gnu/packages/gstreamer.scm (gst-plugins-bad): Update to 1.10.0.
[inputs]: Remove wayland.
[tests]: Update comment about failing tests.
[home-page]: Use https.
 2016-11-05 17:41:39 +02:00
Efraim Flashner
18a9a7ef38
gnu: jasper: Update to 1.900.19. 
* gnu/packages/image.scm (jasper): Update to 1.900.19.
[arguments]: Remove custom make-flags.
 2016-11-05 17:41:38 +02:00
Efraim Flashner
378a0535e1
gnu: freeipmi: Update to 1.5.5. 
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.5.5.
 2016-11-05 17:41:38 +02:00
Efraim Flashner
96451462c5
gnu: python-gst: Update to 1.10.0. 
* gnu/packages/gstreamer.scm (python-gst): Update to 1.10.0.
 2016-11-05 17:41:38 +02:00
Efraim Flashner
81fc4b20c7
gnu: gst-libav: Update to 1.10.0. 
* gnu/packages/gstreamer.scm (gst-libav): Update to 1.10.0.
 2016-11-05 17:41:37 +02:00
Efraim Flashner
7aa083e581
gnu: gst-plugins-ugly: Update to 1.10.0. 
* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.10.0.
 2016-11-05 17:41:37 +02:00
Efraim Flashner
49eddefbf0
gnu: gst-plugins-good: Update to 1.10.0. 
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.10.0.
 2016-11-05 17:41:37 +02:00
Efraim Flashner
74e6c84444
gnu: gst-plugins-base: Update to 1.10.0. 
* gnu/packages/gstreamer.scm (gst-plugins-base): Update to 1.10.0.
 2016-11-05 17:41:37 +02:00
Efraim Flashner
e2a2eeecce
gnu: gstreamer: Update to 1.10.0. 
* gnu/packages/gstreamer.scm (gstreamer): Update to 1.10.0.
 2016-11-05 17:41:36 +02:00
ng0
05234973c7
gnu: Add mps-youtube. 
* gnu/packages/video.scm (mps-youtube): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-05 12:27:12 +00:00
ng0
02f8f804f0
gnu: Add python-pafy. 
* gnu/packages/python.scm (python-pafy): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-05 12:27:12 +00:00
Leo Famulari
c2f4cab9a0
gnu: libidn: Distinguish from libidn2. 
* gnu/packages/libidn.scm (libidn)[description]: Add detail to help distinguish
from libidn2.
 2016-11-05 01:12:35 -04:00
Leo Famulari
250a8abc66
gnu: Add libidn2. 
* gnu/packages/libidn.scm (libidn2): New variable.
 2016-11-05 01:12:31 -04:00
Kei Kebreau
674a0f9558
gnu: w3m: Switch to Debian's actively maintained fork of w3m. 
Fixes some security issues seen here:
<http://www.openwall.com/lists/oss-security/2016/11/03/3>

* gnu/packages/w3m.scm (w3m): Switch it.
[source]: Use Debian's git tree. Remove obsolete patches.
[arguments]: Remove an unneeded substitute* function.
* gnu/packages/patches/w3m-disable-sslv2-and-sslv3.patch,
gnu/packages/patches/w3m-disable-weak-ciphers.patch,
gnu/packages/patches/w3m-force-ssl_verify_server-on.patch,
gnu/packages/patches/w3m-libgc.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-11-04 20:06:03 -04:00
Leo Famulari
682bfb8124
gnu: webkitgtk: Update to 2.14.2. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.14.1.
 2016-11-04 19:49:11 -04:00
Ricardo Wurmus
c27ae827da
gnu: Add jupyter. 
* gnu/packages/python.scm (jupyter): New variable.
 2016-11-04 21:23:08 +01:00
Ricardo Wurmus
accd5f996e
gnu: python-ipython: Update to 4.0.0. 
* gnu/packages/python.scm (python-ipython): Update to 4.0.0.
[inputs]: Keep only "readline" and "which"; move the remaining inputs
to propagated-inputs, except for "python-requests" and "python-nose"
which are moved to native-inputs.
[propagated-inputs]: Add "python-pexpect", "python-pickleshare",
"python-simplegeneric", "python-traitlets", "python-ipykernel".
[native-inputs]: Add "python-testpath".
[arguments]: Enable building of HTML documentation.
[source]: Remove patch.
* gnu/packages/patches/python-ipython-inputhook-ctype.patch: Remove
patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-04 21:23:07 +01:00
Ricardo Wurmus
8ceebf8fa6
gnu: Add python-jupyter-console. 
* gnu/packages/python.scm (python-jupyter-console,
python2-jupyter-console): New variable.
 2016-11-04 21:23:07 +01:00
Ricardo Wurmus
4fe2e34409
gnu: Add python-ipywidgets. 
* gnu/packages/python.scm (python-ipywidgets, python2-ipywidgets): New
variables.
 2016-11-04 21:23:06 +01:00
Ricardo Wurmus
d55724ed5b
gnu: Add python-widgetsnbextension. 
* gnu/packages/python.scm (python-widgetsnbextension,
python2-widgetsnbextension): New variables.
 2016-11-04 21:23:06 +01:00
Ricardo Wurmus
a0d62280f5
gnu: Add python-notebook. 
* gnu/packages/python.scm (python-notebook, python2-notebook): New
variables.
 2016-11-04 21:23:05 +01:00
Ricardo Wurmus
c60898a845
gnu: Add python-nbconvert. 
* gnu/packages/python.scm (python-nbconvert, python2-nbconvert): New
variables.
 2016-11-04 21:23:05 +01:00
Ricardo Wurmus
60590a3ae8
gnu: Add python-entrypoints. 
* gnu/packages/python.scm (python-entrypoints, python2-entrypoints): New
variables.
 2016-11-04 21:23:04 +01:00
Kei Kebreau
08722837b0
gnu: chromium-bsu: Update to 0.9.16.1. 
* gnu/packages/games.scm (chromium-bsu): Update to 0.9.16.1.
[arguments]: Remove 'set-sdl-paths phase.
[inputs]: Add gnu-gettext.
 2016-11-04 11:17:09 -04:00
Ludovic Courtès
bd2e1a8cb0
gnu: cross-base: Remove exports of cross compilers. 
They were never really needed and caused troubles in the presence of
circular module dependencies as reported by
Danny Milosavljevic <dannym@scratchpost.org> at
<https://lists.gnu.org/archive/html/guix-devel/2016-11/msg00144.html>.

* gnu/packages/cross-base.scm (xgcc-mips64el, xgcc-xtensa, xgcc-armhf):
Remove.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[native-inputs]: Use
'cross-gcc' instead of XGCC-XTENSA.
 2016-11-04 15:36:00 +01:00
Ludovic Courtès
fb77c61422
gnu: Remove '%final-inputs' references at the top level. 
Due to circular dependencies, referring to bindings exported by other
modules from the top level is frowned upon.  This patch addresses one of
the remaining cases.

* gnu/packages/base.scm (%final-inputs): New procedure.
* gnu/packages/cross-base.scm: Remove (gnu packages commencement) import.
(cross-gcc): Use the new '%final-inputs'.
* gnu/packages/make-bootstrap.scm: Remove (gnu packages commencement) import.
(package-with-relocatable-glibc): Use the new '%final-inputs'.
 2016-11-04 15:36:00 +01:00
Roel Janssen
8af47ef603
gnu: r-nmf: Use bigmemory. 
* gnu/packages/statistics.scm (r-nmf)[propagated-inputs]: Add
r-bigmemory and r-synchronicity.
 2016-11-04 14:53:24 +01:00
Roel Janssen
59523c4cf5
gnu: Add r-bigmemory. 
* gnu/packages/statistics.scm (r-bigmemory): New variable.
 2016-11-04 14:46:47 +01:00
Roel Janssen
4a83865286
gnu: Add r-synchronicity. 
* gnu/packages/statistics.scm (r-synchronicity): New variable.
 2016-11-04 14:40:13 +01:00
Roel Janssen
c6105d69c0
gnu: Add r-bigmemory-sri. 
gnu/packages/statistics.scm (r-bigmemory-sri): New variable.
 2016-11-04 14:35:04 +01:00
宋文武
1a79d4767a
gnu: xmp: Update to 4.1.0. 
* gnu/packages/audio.scm (xmp): Update to 4.1.0.
 2016-11-04 21:08:44 +08:00
宋文武
2784fca032
gnu: libxmp: Update to 4.4.1. 
* gnu/packages/audio.scm (libxmp): Update to 4.4.1.
 2016-11-04 21:08:44 +08:00
Florian Paul Schmidt
18f3d92b39
gnu: Add swh-plugins-lv2. 
* gnu/packages/audio.scm (swh-plugins-lv2): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2016-11-04 12:11:06 +01:00
Ricardo Wurmus
55436048d8
gnu: Add python-bleach. 
* gnu/packages/python.scm (python-bleach, python2-bleach): New
variables.
 2016-11-04 11:32:35 +01:00
Ricardo Wurmus
2d321bb2c5
gnu: Add python-nbformat. 
* gnu/packages/python.scm (python-nbformat, python2-nbformat): New
variables.
 2016-11-04 11:29:16 +01:00
Ricardo Wurmus
8ee62c97f6
gnu: Add python-html5lib-0.9. 
* gnu/packages/python.scm (python-html5lib-0.9, python2-html5lib-0.9):
New variables.
 2016-11-04 11:26:34 +01:00
Ricardo Wurmus
5ff6effcc0
gnu: Add python-testpath. 
* gnu/packages/python.scm (python-testpath, python2-testpath): New
variables.
 2016-11-04 11:24:02 +01:00
Ricardo Wurmus
ab526102ed
gnu: Add python-ipykernel. 
* gnu/packages/python.scm (python-ipykernel, python2-ipykernel): New
variables.
 2016-11-04 11:23:19 +01:00
Ricardo Wurmus
9ff01f2d01
gnu: Add python-jupyter-client. 
* gnu/packages/python.scm (python-jupyter-client,
python2-jupyter-client): New variables.
 2016-11-04 11:22:54 +01:00
Ricardo Wurmus
4263b06fa2
gnu: Add python-jupyter-core. 
* gnu/packages/python.scm (python-jupyter-core, python2-jupyter-core):
New variables.
 2016-11-04 11:21:37 +01:00
Ricardo Wurmus
a5ba14811a
gnu: python-traitlets: Update to 4.2.0. 
* gnu/packages/python.scm (python-traitlets): Update to 4.2.0.
 2016-11-04 11:19:22 +01:00
Marius Bakke
6e1d7aa94e
gnu: Add font-adobe-source-code-pro. 
* gnu/packages/fonts.scm (font-adobe-source-code-pro): New variable.
 2016-11-03 20:32:04 +00:00
Marius Bakke
b4edcd28cf
gnu: Add geteltorito. 
* gnu/packages/cdrom.scm (geteltorito): New variable.
 2016-11-03 20:31:36 +00:00
Kei Kebreau
ccbc575824
gnu: maxima: Update to 5.38.1. 
* gnu/packages/maths.scm (maxima): Update to 5.38.1.
 2016-11-03 16:14:05 -04:00
Kei Kebreau
043f1535c2
gnu: starfighter: Update to 1.6. 
* gnu/packages/games.scm (starfighter): Update to 1.6.
 2016-11-03 15:40:17 -04:00
Ricardo Wurmus
ed8fbe5e62
gnu: r-rcas: Update to 1.0.0. 
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.0.0.
 2016-11-03 19:01:46 +01:00
Ricardo Wurmus
16a8bd3194
gnu: r-rtracklayer: Update to 1.34.1. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.34.1.
 2016-11-03 19:01:46 +01:00
Ricardo Wurmus
c15ae9b008
gnu: r-biocparallel: Update to 1.8.1. 
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.8.1.
 2016-11-03 19:01:46 +01:00
Ricardo Wurmus
5b3b2d2f02
gnu: r-limma: Update to 3.30.2. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.30.2.
 2016-11-03 19:01:46 +01:00
Ricardo Wurmus
ed3054231d
gnu: r-edger: Update to 3.16.1. 
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.16.1.
 2016-11-03 19:01:45 +01:00
Ricardo Wurmus
e71659162b
gnu: r-hmisc: Update to 4.0.0. 
* gnu/packages/statistics.scm (r-hmisc): Update to 4.0.0.
[propagated-inputs]: Add r-htmltable, r-htmltools, r-viridis,
r-survival.
 2016-11-03 19:01:45 +01:00
Ricardo Wurmus
f158b92caf
gnu: r-r-oo: Update to 1.21.0. 
* gnu/packages/statistics.scm (r-r-oo): Update to 1.21.0.
 2016-11-03 19:01:45 +01:00
Ricardo Wurmus
f890981690
gnu: r-openssl: Update to 0.9.5. 
* gnu/packages/statistics.scm (r-openssl): Update to 0.9.5.
 2016-11-03 19:01:45 +01:00
Ricardo Wurmus
fbe5161c7d
gnu: r-checkmate: Update to 1.8.2. 
* gnu/packages/statistics.scm (r-checkmate): Update to 1.8.2.
 2016-11-03 19:01:45 +01:00
Ricardo Wurmus
572e1a0ca7
gnu: r-acepack: Update to 1.4.1. 
* gnu/packages/statistics.scm (r-acepack): Update to 1.4.1.
 2016-11-03 19:01:44 +01:00
Ricardo Wurmus
054a9a786b
gnu: r-gdtools: Update to 0.1.1. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.1.
[propagated-inputs]: Add r-withr.
 2016-11-03 19:01:44 +01:00
Ricardo Wurmus
d13a4e2575
gnu: r-proto: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-proto): Update to 1.0.0.
 2016-11-03 19:01:44 +01:00
Ricardo Wurmus
ebbd4d0bfd
gnu: Add r-survival. 
* gnu/packages/statistics.scm (r-survival): New variable.
 2016-11-03 19:01:44 +01:00
Ricardo Wurmus
ac3265abad
gnu: Add r-htmltable. 
* gnu/packages/web.scm (r-htmltable): New variable.
 2016-11-03 19:01:44 +01:00
Kei Kebreau
b81245ccb3
[PATCH] gnu: Add libjxr. 
* gnu/packages/image.scm (libjxr): New variable.
* gnu/packages/patches/libjxr-fix-function-signature.patch: New file.
* gnu/packages/patches/libjxr-fix-typos.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patches.
 2016-11-03 13:43:23 -04:00