Commit graph

2590 commits

Author SHA1 Message Date
Ricardo Wurmus
112947d1c6
gnu: r-future: Update to 1.19.1.
* gnu/packages/cran.scm (r-future): Update to 1.19.1.
2020-10-06 00:34:59 +02:00
Ricardo Wurmus
eae0e04a28
gnu: r-globals: Update to 0.13.0.
* gnu/packages/cran.scm (r-globals): Update to 0.13.0.
2020-10-06 00:34:59 +02:00
Ricardo Wurmus
b4c0634116
gnu: r-spatialextremes: Update to 2.0-9.
* gnu/packages/cran.scm (r-spatialextremes): Update to 2.0-9.
2020-10-06 00:34:59 +02:00
Ricardo Wurmus
882ae6dcaa
gnu: r-fields: Update to 11.5.
* gnu/packages/cran.scm (r-fields): Update to 11.5.
2020-10-06 00:34:59 +02:00
Ricardo Wurmus
79f1b40303
gnu: r-gmp: Update to 0.6-1.
* gnu/packages/cran.scm (r-gmp): Update to 0.6-1.
2020-10-06 00:34:59 +02:00
Ricardo Wurmus
876a326a0f
gnu: r-bigrquery: Update to 1.3.2.
* gnu/packages/cran.scm (r-bigrquery): Update to 1.3.2.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
405c7e6550
gnu: r-fftwtools: Update to 0.9-9.
* gnu/packages/cran.scm (r-fftwtools): Update to 0.9-9.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
f273105b74
gnu: r-afex: Update to 0.28-0.
* gnu/packages/cran.scm (r-afex): Update to 0.28-0.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
7e0e3a6512
gnu: r-npsurv: Update to 0.5-0.
* gnu/packages/cran.scm (r-npsurv): Update to 0.5-0.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
f7730afb5e
gnu: r-lsei: Update to 1.3-0.
* gnu/packages/cran.scm (r-lsei): Update to 1.3-0.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
bc249d37d9
gnu: r-usethis: Update to 1.6.3.
* gnu/packages/cran.scm (r-usethis): Update to 1.6.3.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
aed63a8731
gnu: r-sjplot: Update to 2.8.5.
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.5.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
08f7d7d71b
gnu: r-effectsize: Update to 0.3.3.
* gnu/packages/cran.scm (r-effectsize): Update to 0.3.3.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
d7beb6da1c
gnu: r-emmeans: Update to 1.5.1.
* gnu/packages/cran.scm (r-emmeans): Update to 1.5.1.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
336804fc1d
gnu: r-multcomp: Update to 1.4-14.
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-14.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
65f463d3d8
gnu: r-sandwich: Update to 3.0-0.
* gnu/packages/cran.scm (r-sandwich): Update to 3.0-0.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
0ac936ea21
gnu: r-deriv: Update to 4.1.0.
* gnu/packages/cran.scm (r-deriv): Update to 4.1.0.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
5522640faf
gnu: r-sjlabelled: Update to 1.1.7.
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.7.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
b8b75e46b5
gnu: r-insight: Update to 0.9.6.
* gnu/packages/cran.scm (r-insight): Update to 0.9.6.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
75c394abbf
gnu: r-bibtex: Update to 0.4.2.3.
* gnu/packages/cran.scm (r-bibtex): Update to 0.4.2.3.
2020-10-06 00:34:58 +02:00
Ricardo Wurmus
794a6bc342
gnu: r-openxlsx: Update to 4.2.2.
* gnu/packages/cran.scm (r-openxlsx): Update to 4.2.2.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
e3b821456b
gnu: r-import: Update to 1.2.0.
* gnu/packages/cran.scm (r-import): Update to 1.2.0.
[native-inputs]: Add r-knitr.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
6fbb3c9abe
gnu: r-trend: Update to 1.1.4.
* gnu/packages/cran.scm (r-trend): Update to 1.1.4.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
e010576266
gnu: r-statnet-common: Update to 4.4.1.
* gnu/packages/cran.scm (r-statnet-common): Update to 4.4.1.
[propagated-inputs]: Add r-rle.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
4cd4cf0925
gnu: r-tinytex: Update to 0.26.
* gnu/packages/cran.scm (r-tinytex): Update to 0.26.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
5f777b5ff2
gnu: r-xfun: Update to 0.18.
* gnu/packages/cran.scm (r-xfun): Update to 0.18.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
c4eff84f76
gnu: r-seriation: Update to 1.2-9.
* gnu/packages/cran.scm (r-seriation): Update to 1.2-9.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
e3199b4b4d
gnu: r-dtw: Update to 1.22-3.
* gnu/packages/cran.scm (r-dtw): Update to 1.22-3.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
54753cf0ee
gnu: r-vcd: Update to 1.4-8.
* gnu/packages/cran.scm (r-vcd): Update to 1.4-8.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
daba9cffc2
gnu: r-hardyweinberg: Update to 1.6.8.
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.6.8.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
fec04395bb
gnu: r-broom: Update to 0.7.1.
* gnu/packages/cran.scm (r-broom): Update to 0.7.1.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
6016d52f42
gnu: r-psych: Update to 2.0.9.
* gnu/packages/cran.scm (r-psych): Update to 2.0.9.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
f8ca0afa19
gnu: r-lava: Update to 1.6.8.
* gnu/packages/cran.scm (r-lava): Update to 1.6.8.
[native-inputs]: Add r-knitr.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
271e4a325e
gnu: r-getoptlong: Update to 1.0.3.
* gnu/packages/cran.scm (r-getoptlong): Update to 1.0.3.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
4fcf7626f7
gnu: r-htmltable: Update to 2.1.0.
* gnu/packages/cran.scm (r-htmltable): Update to 2.1.0.
2020-10-06 00:34:57 +02:00
Ricardo Wurmus
1b3d184e67
gnu: r-htmlwidgets: Update to 1.5.2.
* gnu/packages/cran.scm (r-htmlwidgets): Update to 1.5.2.
[native-inputs]: Add r-knitr.
2020-10-06 00:34:56 +02:00
Ricardo Wurmus
5f9f23f43c
gnu: r-rticles: Update to 0.16.
* gnu/packages/cran.scm (r-rticles): Update to 0.16.
2020-10-06 00:34:56 +02:00
Ricardo Wurmus
b0728c4d7e
gnu: Add r-slider.
* gnu/packages/cran.scm (r-slider): New variable.
2020-10-06 00:34:56 +02:00
Ricardo Wurmus
64d4816881
gnu: Add r-warp.
* gnu/packages/cran.scm (r-warp): New variable.
2020-10-06 00:34:56 +02:00
Ricardo Wurmus
f5defed0df
gnu: Add r-rle.
* gnu/packages/cran.scm (r-rle): New variable.
2020-10-06 00:34:53 +02:00
Efraim Flashner
1628d57bb5
gnu: Fix package references.
* gnu/packages/algebra.scm (iml)[inputs]: Correctly refer to package
inputs.
* gnu/packages/astronomy.scm (xplanet),
* gnu/packages/audio.scm (redkite, libaudec, lv2lint, lv2toweb),
* gnu/packages/bioconductor.scm (r-cummerbund),
* gnu/packages/chicken.scm (chicken),
* gnu/packages/conky.scm (conky),
* gnu/packages/cran.scm (r-latex2exp),
* gnu/packages/crates-io.scm (rust-rgb),
* gnu/packages/databases.scm (mariadb),
* gnu/packages/diffoscope.scm (reprotest),
* gnu/packages/file-systems.scm (glusterfs),
* gnu/packages/finance.scm (electron-cash),
* gnu/packages/games.scm (rinutils, ksudoku, kdiamond, kigo),
* gnu/packages/geo.scm (grass),
* gnu/packages/gnome.scm (libmediaart, gnome-contacts, geoclue),
* gnu/packages/gnucash.scm (aqbanking),
* gnu/packages/image.scm (mtpaint),
* gnu/packages/kde-internet.scm (kopete, ktorrent),
* gnu/packages/kde-utils.scm (kmousetool, kmouth, kronometer),
* gnu/packages/linphone.scm (liblinphone),
* gnu/packages/maths.scm (ppl),
* gnu/packages/mercury.scm (mercury-minimal),
* gnu/packages/music.scm (bjumblr, bschaffl, lsp-plugins,
spectacle-analyzer, helm, tap-lv2, wolf-shaper, shiru-lv2),
* gnu/packages/networking.scm (restinio),
* gnu/packages/prolog.scm (swi-prolog),
* gnu/packages/python-web.scm (gunicorn),
* gnu/packages/python-xyz.scm (python-docusign-esign),
* gnu/packages/ruby.scm (ruby-cucumber, ruby_version, ruby-addressable),
* gnu/packages/sagemath.scm (python-cypari2),
* gnu/packages/skarnet.scm (s6-linux-init),
* gnu/packages/vpn.scm (sshuttle),
* gnu/packages/web.scm (libcyaml),
* gnu/packages/xdisorg.scm (kbdd),
* gnu/packages/xorg.scm (xpra): Same.
2020-09-30 09:28:26 +03:00
Tobias Geerinckx-Rice
7230f6d5dd
gnu: Fix typoes in package descriptions.
* gnu/packages/audio.scm (caps-plugins-lv2)[synopsis]: Fix typo.
* gnu/packages/bioconductor.scm (r-karyoploter, r-anota, r-gcrma)
(r-bigmemoryextras)[description]: Likewise.
* gnu/packages/cran.scm (r-geometry)[synopsis]: Likewise.
(r-stringdist, r-patchwork, r-depth, r-tea)[description]: Likewise.
* gnu/packages/crates-io.scm (rust-assert-fs-0.11, rust-notify-4)
(rust-tokio-fs-0.1)[synopsis, description]: Likewise.
(rust-blas-sys-0.7)[description]: Likewise.
(rust-fs-extra-1.1, rust-xattr-0.2)[synopsis]: Likewise.
* gnu/packages/databases.scm (perl-mysql-config)[description]: Likewise.
* gnu/packages/disk.scm (hddtemp)[description]: Likewise.
* gnu/packages/django.scm (python-djangorestframework)[description]:
Likewise.
* gnu/packages/documentation.scm (doc++)[description]: Likewise.
* gnu/packages/emacs-xyz.scm (emacs-kakoune, emacs-pyim-basedict, eless)
(emacs-scpaste)[description]: Likewise.
* gnu/packages/file-systems.scm (dbxfs)[description]: Likewise.
* gnu/packages/finance.scm (python-stdnum)[description]: Likewise.
* gnu/packages/fontutils.scm (woff2)[description]: Likewise.
* gnu/packages/games.scm (openttd-opengfx)[description]: Likewise.
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-topicons-redux)
[description]: Likewise.
* gnu/packages/gnome.scm (libgrss)[description]: Likewise.
* gnu/packages/golang.scm (go-github-com-mitchellh-reflectwalk)
[description]: Likewise.
(go-github-com-go-git-go-billy)[synopsis, description]: Likewise.
* gnu/packages/haskell-check.scm (ghc-inspection-testing)[description]:
Likewise.
* gnu/packages/haskell-web.scm (ghc-yesod-form)[description]: Likewise.
* gnu/packages/haskell-xyz.scm (ghc-hex)[description]: Likewise.
* gnu/packages/hyperledger.scm (hyperledger-iroha-ed25519)[description]:
Likewise.
* gnu/packages/java.scm (java-mail)[synopsis]: Likewise.
(java-native-access-platform)[description]: Likewise.
* gnu/packages/kde-frameworks.scm (kactivities-stats)[description]:
Likewise.
* gnu/packages/kde-utils.scm (krusader)[description]: Likewise.
* gnu/packages/language.scm (praat)[description]: Likewise.
* gnu/packages/linux.scm (light)[description]: Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-hu.dwim.defclass-star)[description]:
Likewise.
* gnu/packages/mail.scm (dovecot-trees, sieve-connect)[description]:
Likewise.
* gnu/packages/ocaml.scm (ocaml-opam-file-format, ocaml-cppo)
(ocaml4.07-ppx-variants-conv)[description]: Likewise.
* gnu/packages/perl.scm (perl-convert-binhex)[description]: Likewise.
* gnu/packages/python-crypto.scm (python-ecdsa)[description]: Likewise.
* gnu/packages/python-web.scm (python-html5lib)[synopsis, description]:
Likewise.
(python-venusian)[synopsis]: Likewise.
* gnu/packages/python-xyz.scm (python-readlike, python-gssapi)
(python-flufl-i18n)[description]: Likewise.
(python-pox, python-watchdog, python-xattr)[synopsis, description]:
Likewise.
* gnu/packages/ruby.scm (ruby-sorcerer)[description]: Likewise.
* gnu/packages/rust-apps.scm (watchexec)[description]: Likewise.
* gnu/packages/rust.scm (mrustc)[synopsis]: Likewise.
* gnu/packages/shells.scm (s-shell)[description]: Likewise.
* gnu/packages/ssh.scm (sshpass)[description]: Likewise.
* gnu/packages/terminals.scm (beep)[description]: Likewise.
* gnu/packages/web.scm (perl-lwp-useragent-cached)[description]:
Likewise.
* gnu/packages/wv.scm (wv)[description]: Likewise.
2020-09-23 04:37:01 +02:00
Ricardo Wurmus
3159fcf145
gnu: r-wgcna: Move to (gnu packages bioconductor).
This is a follow-up to commit 6e0ab26f31.

* gnu/packages/cran.scm (r-wgcna): Move from here...
* gnu/packages/bioconductor.scm (r-wgcna): ...to here.
2020-09-14 21:40:15 +02:00
zimoun
f4d920b9f7
gnu: r-fourcseq: Move to (gnu packages bioconductor).
* gnu/packages/cran.scm (r-fourcseq): Move from here...
* gnu/packages/bioconductor.scm (r-fourcseq): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14 21:39:00 +02:00
Ricardo Wurmus
1c1b941902
gnu: r-diversitree: Update to 0.9-14.
* gnu/packages/cran.scm (r-diversitree): Update to 0.9-14.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
8731d274ae
gnu: r-seurat: Update to 3.2.1.
* gnu/packages/cran.scm (r-seurat): Update to 3.2.1.
[propagated-inputs]: Remove r-ape; add r-matrixstats.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
e6711231ed
gnu: r-rfast: Update to 2.0.1.
* gnu/packages/cran.scm (r-rfast): Update to 2.0.1.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
0982ffa898
gnu: r-scatterpie: Update to 0.1.5.
* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.5.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
df2210be8b
gnu: r-forecast: Update to 8.13.
* gnu/packages/cran.scm (r-forecast): Update to 8.13.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
ad10a45225
gnu: r-gamlss: Update to 5.2-0.
* gnu/packages/cran.scm (r-gamlss): Update to 5.2-0.
2020-09-14 19:07:47 +02:00