Commit graph

96645 commits

Author SHA1 Message Date
Ricardo Wurmus
1b75b53a0e
gnu: r-catalyst: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.20.1.
2022-05-28 23:19:41 +02:00
Ricardo Wurmus
e4a8e6dab4
gnu: r-msmstests: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.34.0.
2022-05-28 23:19:41 +02:00
Ricardo Wurmus
d99da8bb1c
gnu: r-msmseda: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.34.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
f185bf805c
gnu: r-biocio: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.6.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
d34a40c4c0
gnu: r-msfeatures: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-msfeatures): Update to 1.4.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
ec7849c360
gnu: r-mscoreutils: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.8.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
9381702bbc
gnu: r-delayedmatrixstats: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.18.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
eca29a788b
gnu: r-sparsematrixstats: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.8.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
5f04cf7bdb
gnu: r-scran: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-scran): Update to 1.24.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
9631f2190a
gnu: r-scater: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.24.0.
[propagated-inputs]: Add r-rcppml.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
a8fbcbdb7a
gnu: r-scuttle: Update to 1.6.2.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.6.2.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
816a1ba4dc
gnu: r-singler: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-singler): Update to 1.10.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
decd8480f6
gnu: r-singlecellexperiment: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.18.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
d9d9f78391
gnu: r-chromvar: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.18.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
3ef47df3b6
gnu: r-motifmatchr: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.18.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
e213375069
gnu: r-maftools: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-maftools): Update to 2.12.0.
[propagated-inputs]: Add r-dnacopy.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
7c9793b3e8
gnu: r-tfbstools: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.34.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
bde757d11d
gnu: r-cner: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-cner): Update to 1.32.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
18fd5759c7
gnu: r-beachmat: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.12.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
3db60a25a7
gnu: r-rhdf5lib: Update to 1.18.2.
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.18.2.
[source]: Adjust snippet.
[arguments]: Update build phase 'do-not-use-bundled-hdf5.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
59519a14de
gnu: r-hdf5array: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.24.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
0b0bce3556
gnu: r-hitc: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.40.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
8b7e1da3b6
gnu: r-fithic: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.22.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
3c57f6d2a0
gnu: r-rgraphviz: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.40.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
c8e364b609
gnu: r-s4vectors: Update to 0.34.0.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.34.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
16419c4639
gnu: r-preprocesscore: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.58.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
0a9838b17d
gnu: r-icens: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-icens): Update to 1.68.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
3e7b5a45e4
gnu: r-m3c: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.18.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
dd33e8b062
gnu: r-rgreat: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.28.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
0f1295e9e9
gnu: r-pcatools: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.8.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
9f3d204c3a
gnu: r-biodist: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.68.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
a56e8ec8fb
gnu: r-biocworkflowtools: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.22.0.
2022-05-28 23:19:37 +02:00
Ricardo Wurmus
22300462dd
gnu: r-biocset: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.10.0.
2022-05-28 23:19:37 +02:00
Ricardo Wurmus
d5875494dd
gnu: r-biocpkgtools: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.14.0.
2022-05-28 23:19:37 +02:00
Ricardo Wurmus
b86b657862
gnu: r-biocor: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.20.0.
2022-05-28 23:19:37 +02:00
Ricardo Wurmus
e833302c58
gnu: r-bioconcotk: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.16.0.
2022-05-28 23:19:37 +02:00
Ricardo Wurmus
4028c2b3b5
gnu: r-multiassayexperiment: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.22.0.
2022-05-28 23:19:37 +02:00
Ricardo Wurmus
c3733497e0
gnu: r-grohmm: Update to 1.30.1.
* gnu/packages/bioconductor.scm (r-grohmm): Update to 1.30.1.
2022-05-28 23:19:37 +02:00
Ricardo Wurmus
a2756089ef
gnu: r-experimenthub: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.4.0.
2022-05-28 23:19:37 +02:00
Ricardo Wurmus
ad6185a57c
gnu: r-biocviews: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.64.0.
2022-05-28 23:19:36 +02:00
Ricardo Wurmus
52a79b24b6
gnu: r-biocstyle: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.24.0.
2022-05-28 23:19:36 +02:00
Ricardo Wurmus
d377dd0e2b
gnu: r-biocgraph: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.58.0.
2022-05-28 23:19:36 +02:00
Ricardo Wurmus
98074b0553
gnu: r-bioccheck: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.32.0.
[propagated-inputs]: Remove r-optparse.
2022-05-28 23:19:36 +02:00
Ricardo Wurmus
89c5079007
gnu: r-ebarrays: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.60.0.
2022-05-28 23:19:36 +02:00
Ricardo Wurmus
449b0f0920
gnu: r-reactomepa: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.40.0.
2022-05-28 23:19:36 +02:00
Ricardo Wurmus
8f240ba849
gnu: r-graphite: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.42.0.
[propagated-inputs]: Remove r-checkmate; add r-rlang.
2022-05-28 23:19:36 +02:00
Ricardo Wurmus
63726dee63
gnu: r-biobroom: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.28.0.
2022-05-28 23:19:36 +02:00
Ricardo Wurmus
4bb7bb8db3
gnu: r-bioassayr: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.34.0.
2022-05-28 23:19:35 +02:00
Ricardo Wurmus
3d99b6af60
gnu: r-fmcsr: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-fmcsr): Update to 1.38.0.
2022-05-28 23:19:35 +02:00
Ricardo Wurmus
985723a862
gnu: r-chemminer: Update to 3.48.0.
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.48.0.
2022-05-28 23:19:35 +02:00