Commit graph

258 commits

Author SHA1 Message Date
Ricardo Wurmus
71cafa0472 gnu: Add r-doparallel.
* gnu/packages/statistics.scm (r-doparallel): New variable.
2016-03-21 15:54:05 +01:00
Ricardo Wurmus
b2cdb0271b gnu: Add r-foreach.
* gnu/packages/statistics.scm (r-foreach): New variable.
2016-03-21 15:54:05 +01:00
Ricardo Wurmus
7a6f5f0323 gnu: Add r-codetools.
* gnu/packages/statistics.scm (r-codetools): New variable.
2016-03-21 15:54:05 +01:00
Ricardo Wurmus
264df1a49d gnu: Add r-iterators.
* gnu/packages/statistics.scm (r-iterators): New variable.
2016-03-21 15:54:05 +01:00
Andreas Enge
aad375c9bc gnu: statistics: Remove import of unused texlive module.
* gnu/packages/statistics.scm: Do not import (gnu packages texlive).
2016-03-09 22:36:45 +01:00
Pjotr Prins
b70fa3c7f7 gnu: r-ggplot2: Update to 2.0.0.
* gnu/packages/statistics.scm (r-ggplot2): Update to 2.0.0.
2016-03-01 19:47:24 +02:00
Efraim Flashner
5ad87e5bb5 gnu: python-patsy: Define 'python2-variant'.
* gnu/packages/statistics.scm (python-patsy)[properties]: New field.
(python2-patsy): Use 'strip-python2-variant'.
2016-02-22 21:59:02 +02:00
Efraim Flashner
f4cd2ceabd gnu: python-patsy: Update to 0.4.1.
* gnu/packages/statistics.scm (python-patsy, python2-patsy): Update to 0.4.1.
2016-02-22 21:59:02 +02:00
Andreas Enge
eb2afd000c gnu: r: Drop input lapack.
* gnu/packages/statistics.scm (r)[inputs]: Drop lapack, which is
  recommended by the manual.
  [arguments]: Adapt configure flags.
2016-02-05 23:20:43 +01:00
Andreas Enge
95b754a17a gnu: r: Drop input openblas.
* gnu/packages/statistics.scm (r)[inputs]: Drop openblas.
  [arguments]: Adapt configure flags. This makes the build succeed
  on armhf-linux.
2016-02-05 20:51:39 +01:00
Ricardo Wurmus
d7786ce9b0 gnu: r-sparsem: Add missing "gfortran" input.
* gnu/packages/statistics.scm (r-sparsem)[inputs]: Add "gfortran".
2016-01-14 14:43:59 +01:00
Andreas Enge
695bea9803 gnu: r: Update to 3.2.3.
* gnu/packages/statistics.scm (r): Update to 3.2.3.
2016-01-09 23:18:28 +01:00
Ricardo Wurmus
fbf6045e33 gnu: Add plotly.
* gnu/packages/statistics.scm (r-plotly): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
a28d646b63 gnu: Add viridis.
* gnu/packages/statistics.scm (r-viridis): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
e05c37da4a gnu: Add matrixStats.
* gnu/packages/statistics.scm (r-matrixstats): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
3703ffb41f gnu: Add R.rsp.
* gnu/packages/statistics.scm (r-r-rsp): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
a63efbb453 gnu: Add R.cache.
* gnu/packages/statistics.scm (r-r-cache): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
9c94b53b5b gnu: Add R.utils.
* gnu/packages/statistics.scm (r-r-utils): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
c8c75a8d88 gnu: Add R.oo.
* gnu/packages/statistics.scm (r-r-oo): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
8bfe007c9c gnu: Add R.methodsS3.
* gnu/packages/statistics.scm (r-r-methodss3): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
a69a593595 gnu: Add base64enc.
* gnu/packages/statistics.scm (r-base64enc): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
a8227e4ae9 gnu: Add DT.
* gnu/packages/statistics.scm (r-dt): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
d706257b5b gnu: Add SparseM.
* gnu/packages/statistics.scm (r-sparsem): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
bc899123e7 gnu: Add snow.
* gnu/packages/statistics.scm (r-snow): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
6b82f56cf9 gnu: Add futile.logger.
* gnu/packages/statistics.scm (r-futile-logger): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
b9ff33b50e gnu: Add futile.options.
* gnu/packages/statistics.scm (r-futile-options): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
ca65d387fd gnu: Add lambda.r.
* gnu/packages/statistics.scm (r-lambda-r): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
543ded3619 gnu: Add r-xml.
* gnu/packages/statistics.scm (r-xml): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
cefaa79c9e gnu: Add RCurl.
* gnu/packages/statistics.scm (r-rcurl): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
21e4d6a9cf gnu: Add RSQLite.
* gnu/packages/statistics.scm (r-rsqlite): New variable.
2016-01-07 17:18:15 +01:00
Ricardo Wurmus
9e47f30b08 gnu: Add r-gridextra.
* gnu/packages/statistics.scm (r-gridextra): New variable.
2015-12-21 17:21:26 +01:00
Ricardo Wurmus
b73751c8ff gnu: Add r-gtable.
* gnu/packages/statistics.scm (r-gtable): New variable.
2015-12-21 17:21:26 +01:00
Ricardo Wurmus
77bdb276e9 gnu: Add r-rmarkdown.
* gnu/packages/statistics.scm (r-rmarkdown): New variable.
* gnu/packages/haskell.scm: Do not select libxml2 from the xml module to
  prevent circular package module imports.
2015-12-21 17:13:44 +01:00
Ricardo Wurmus
4c1f2705b5 gnu: Add r-catools.
* gnu/packages/statistics.scm (r-catools): New variable.
2015-12-21 17:13:44 +01:00
Ricardo Wurmus
bb6d2dadf7 gnu: Add r-bitops.
* gnu/packages/statistics.scm (r-bitops): New variable.
2015-12-21 17:13:44 +01:00
Ricardo Wurmus
e22d4ca4c4 gnu: Add r-rcpparmadillo.
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): New variable.
* gnu/packages/statistics.scm (r-rcpparmadillo): New variable.
2015-12-21 16:05:37 +01:00
Ricardo Wurmus
ca3476cd6c gnu: Add r-lattice.
* gnu/packages/statistics.scm (r-lattice): New variable.
2015-12-11 15:44:07 +01:00
Ricardo Wurmus
2a40f76389 gnu: Add r-gridbase.
* gnu/packages/statistics.scm (r-gridbase): New variable.
2015-12-11 15:44:07 +01:00
Ricardo Wurmus
60a9d3d0ac gnu: Add r-plotrix.
* gnu/packages/statistics.scm (r-plotrix): New variable.
2015-12-11 15:44:07 +01:00
Ricardo Wurmus
03af370f6e gnu: Add r-readr.
* gnu/packages/statistics.scm (r-readr): New variable.
2015-12-11 15:44:07 +01:00
Ricardo Wurmus
62141c07f7 gnu: Rename r-data.table to r-data-table.
* gnu/packages/statistics.scm (r-data.table): Rename variable ...
(r-data-table): ... to this.
[description]: Clarify relation to data.frame.
[license]: Use correct license.
2015-12-11 15:44:07 +01:00
Ricardo Wurmus
d6e21589af gnu: Add r-devtools.
* gnu/packages/statistics.scm (r-devtools): New variable.
2015-11-16 11:09:49 +01:00
Ricardo Wurmus
81a4228b18 gnu: Add r-rstudioapi.
* gnu/packages/statistics.scm (r-rstudioapi): New variable.
2015-11-16 11:09:49 +01:00
Ricardo Wurmus
035711f1f5 gnu: Add r-git2r.
* gnu/packages/statistics.scm (r-git2r): New variable.
2015-11-16 11:09:49 +01:00
Ricardo Wurmus
681e03c12d gnu: Add r-httr.
* gnu/packages/statistics.scm (r-httr): New variable.
2015-11-16 11:09:49 +01:00
Ricardo Wurmus
167c988263 gnu: Add r-roxygen2.
* gnu/packages/statistics.scm (r-roxygen2): New variable.
2015-11-16 11:09:49 +01:00
Ricardo Wurmus
13d083af59 gnu: Add r-brew.
* gnu/packages/statistics.scm (r-brew): New variable.
2015-11-16 11:09:49 +01:00
Ricardo Wurmus
1a77eccd0e gnu: Add r-whisker.
* gnu/packages/statistics.scm (r-whisker): New variable.
2015-11-16 11:09:49 +01:00
Ricardo Wurmus
6140747f06 gnu: Add r-rversions.
* gnu/packages/statistics.scm (r-rversions): New variable.
2015-11-16 11:09:49 +01:00
Ricardo Wurmus
67a167fdf7 gnu: Add r-xml2.
* gnu/packages/statistics.scm (r-xml2): New variable.
2015-11-16 11:09:49 +01:00
Ricardo Wurmus
37fdba7e0b gnu: Add python-statsmodels.
* gnu/packages/statistics.scm (python-statsmodels, python2-statsmodels):
  New variables.
2015-10-22 17:35:13 +02:00
Ricardo Wurmus
9bc08aa0cb gnu: Add python-patsy.
* gnu/packages/statistics.scm (python-patsy, python2-patsy): New
  variables.
2015-10-22 17:35:05 +02:00
Vicente Vera Parra
0e4e03f884 gnu: Add r-data.table.
* gnu/packages/statistics.scm (r-data.table): New variable.
2015-09-28 11:07:23 +02:00
Vicente Vera Parra
91312ebed4 gnu: Add r-chron.
* gnu/packages/statistics.scm (r-chron): New variable.
2015-09-28 11:07:10 +02:00
Ricardo Wurmus
91781b7498 gnu: r-scales: Update to 0.3.0.
* gnu/packages/statistics.scm (r-scales): Update to 0.3.0.
2015-09-21 11:04:17 +02:00
Vicente Vera Parra
2a3a8ae753 gnu: Add r-dplyr.
* gnu/packages/statistics.scm (r-dplyr): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
ffd4b47851 gnu: Add r-r6.
* gnu/packages/statistics.scm (r-r6): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
5b9789a6ff gnu: Add r-testthat.
* gnu/packages/statistics.scm (r-testthat): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
834f7ff3c0 gnu: Add r-crayon.
* gnu/packages/statistics.scm (r-crayon): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
b668a95cf3 gnu: Add r-memoise.
* gnu/packages/statistics.scm (r-memoise): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
0661b4db2e gnu: Add r-pryr.
* gnu/packages/statistics.scm (r-pryr): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
1cf1cbb0ac gnu: Add r-codetools.
* gnu/packages/statistics.scm (r-codetools): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
4f0e84845d gnu: Add r-microbenchmark.
* gnu/packages/statistics.scm (r-microbenchmark): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
213656b95b gnu: Add r-knitr.
* gnu/packages/statistics.scm (r-knitr): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
ea3a80957a gnu: Add r-yaml.
* gnu/packages/statistics.scm (r-yaml): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
3f8ac35330 gnu: Add r-markdown.
* gnu/packages/statistics.scm (r-markdown): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
acbb40fa20 gnu: Add r-mime.
* gnu/packages/statistics.scm (r-mime): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
ad3f005bdd gnu: Add r-highr.
* gnu/packages/statistics.scm (r-highr): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
c5bf3abe34 gnu: Add r-formatr.
* gnu/packages/statistics.scm (r-formatr): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
256ccc926c gnu: Add r-evaluate.
* gnu/packages/statistics.scm (r-evaluate): New variable.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
675c9f447b gnu: Add r-bh.
* gnu/packages/statistics.scm (r-bh): New variable.
2015-09-21 10:48:26 +02:00
Ricardo Wurmus
9cda36227b gnu: Use cran-uri in source expressions.
* gnu/packages/statistics.scm (r-colorspace, r-dichromat, r-digest,
  r-gtable, r-labeling, r-magrittr, r-munsell, r-rcpp, r-plyr, r-proto,
  r-rcolorbrewer, r-stringi, r-stringr, r-reshape2, r-scales, r-ggplot2,
  r-assertthat, r-lazyeval, r-dbi): Use cran-uri in source expressions.
2015-09-21 10:48:26 +02:00
Vicente Vera Parra
8ea6b30fea gnu: Add r-dbi.
* gnu/packages/statistics.scm (r-dbi): New variable.
2015-09-16 12:01:12 +02:00
Vicente Vera Parra
6af4813430 gnu: Add r-lazyeval.
* gnu/packages/statistics.scm (r-lazyeval): New variable.
2015-09-15 22:33:57 +02:00
Vicente Vera Parra
ed6094fc77 gnu: Add r-assertthat.
* gnu/packages/statistics.scm (r-assertthat): New variable.
2015-09-15 21:09:02 +02:00
Ludovic Courtès
718a2bde42 gnu: r-stringr: Provide valid 'home-page' URL.
* gnu/packages/statistics.scm (r-stringr)[home-page]: Set to valid URL.
2015-09-06 12:36:15 +02:00
Ricardo Wurmus
02615bfa2f gnu: r: Drop texlive from native-inputs.
* gnu/packages/statistics.scm (r)[native-inputs]: Remove "texlive".
2015-09-04 11:55:16 +02:00
Ricardo Wurmus
af23b6e946 gnu: r: Install info documentation.
* gnu/packages/statistics.scm (r)[arguments]: Add phases "make-info" and
  "install-info" to build and install info documentation.
2015-09-04 11:55:16 +02:00
Ricardo Wurmus
5e9738b7ca gnu: r: Drop IcedTea from inputs.
* gnu/packages/statistics.scm (r)[inputs]: Remove "icedtea6".
2015-09-04 11:55:16 +02:00
Ricardo Wurmus
d11b808f4a gnu: Add r-ggplot2.
* gnu/packages/statistics.scm (r-ggplot2): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
a11ee478a6 gnu: Add r-scales.
* gnu/packages/statistics.scm (r-scales): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
9ca731baf1 gnu: Add r-reshape2.
* gnu/packages/statistics.scm (r-reshape2): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
d5cd5c1568 gnu: Add r-stringr.
* gnu/packages/statistics.scm (r-stringr): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
4dca98dc81 gnu: Add r-stringi.
* gnu/packages/statistics.scm (r-stringi): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
a45ba1270c gnu: Add r-rcolorbrewer.
* gnu/packages/statistics.scm (r-rcolorbrewer): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
9a4d8968f0 gnu: Add r-proto.
* gnu/packages/statistics.scm (r-proto): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
7e10056b6b gnu: Add r-plyr.
* gnu/packages/statistics.scm (r-plyr): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
ea69e2f853 gnu: Add r-rcpp.
* gnu/packages/statistics.scm (r-rcpp): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
4437333958 gnu: Add r-munsell.
* gnu/packages/statistics.scm (r-munsell): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
d69c4b04fa gnu: Add r-magrittr.
* gnu/packages/statistics.scm (r-magrittr): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
b7eee9fc65 gnu: Add r-labeling.
* gnu/packages/statistics.scm (r-labeling): New variable.
2015-09-03 14:31:51 +02:00
Ricardo Wurmus
112bb3c04f gnu: Add r-gtable.
* gnu/packages/statistics.scm (r-gtable): New variable.
2015-09-03 14:31:50 +02:00
Ricardo Wurmus
177f38c7fe gnu: Add r-digest.
* gnu/packages/statistics.scm (r-digest): New variable.
2015-09-03 14:31:50 +02:00
Ricardo Wurmus
3587effb7a gnu: Add r-dichromat.
* gnu/packages/statistics.scm (r-dichromat): New variable.
2015-09-03 14:31:50 +02:00
Ricardo Wurmus
b12636e6bb gnu: Add r-colorspace.
* gnu/packages/statistics.scm (r-colorspace): New variable.
2015-09-03 14:31:50 +02:00
Ricardo Wurmus
12a9f4af01 gnu: r: Add R_LIBS_SITE to native-search-paths.
* gnu/packages/statistics.scm (r)[native-search-paths]: Add
  specification for "R_LIBS_SITE" variable.
2015-08-17 10:35:41 +02:00
Ricardo Wurmus
62de2545e1 gnu: r: Update to 3.2.2.
* gnu/packages/statistics.scm (r): Update to 3.2.2.
2015-08-17 10:35:41 +02:00
Ricardo Wurmus
b05d1c68bc gnu: r: Replace "atlas" with "openblas".
* gnu/packages/statistics.scm (r)[inputs]: Replace "atlas" with "openblas".
2015-07-03 18:45:14 +02:00
Ricardo Wurmus
f4f4ced8dc gnu: r: Set default pager.
* gnu/packages/statistics.scm (r)[arguments]: Add phase "set-default-pager" to
  avoid "false" as a default pager.
2015-07-02 10:50:55 +02:00
Ricardo Wurmus
74e03fccd3 gnu: r: Update to 3.2.1.
* gnu/packages/statistics.scm (r): Update to 3.2.1.
* gnu/packages/patches/r-fix-15899.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
2015-06-29 16:13:28 +02:00
Ricardo Wurmus
19afbea136 gnu: Replace versioned gfortran inputs with just "gfortran".
* gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with
  "gfortran".
* gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise.
* gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu)
   (superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise.
   (octave)[native-inputs]: Likewise.
   (gmsh)[propagated-inputs]: Likewise.
* gnu/packages/mpi.scm (openmpi)[inputs]: Likewise.
* gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise.
* gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise.
* gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with
  "gfortran".
2015-06-25 18:28:54 +02:00
Ricardo Wurmus
83a0db178f gnu: r: Use gfortran-4.9.
* gnu/packages/statistics.scm (r)[inputs]: Replace gfortran-4.8 with
  gfortran-4.9.
2015-06-24 12:03:00 +02:00
Ricardo Wurmus
9099e88182 gnu: r: Apply patch to fix linking against R.
* gnu/packages/patches/r-fix-15899.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/statistics.scm (r)[source]: Use it.
2015-05-21 11:54:46 +02:00
Ricardo Wurmus
3c43bcc68d gnu: r: Update to 3.2.0.
* gnu/packages/statistics.scm (r): Update to 3.2.0.
2015-04-23 13:07:11 +02:00
Ricardo Wurmus
ff2b1c17b8 gnu: r: Set library rpath.
* gnu/packages/statistics.scm (r)[arguments]: Add the rpath for lib directory
  of output to LDFLAGS.
2015-04-23 13:07:10 +02:00
Ludovic Courtès
ce0614ddb0 gnu: Move 'which' to (gnu packages base).
* gnu/packages/which.scm: Remove.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove it.
* gnu/packages/base.scm (which): New variable.
* gnu/packages/aspell.scm, gnu/packages/audio.scm,
  gnu/packages/autogen.scm, gnu/packages/cdrom.scm,
  gnu/packages/compression.scm, gnu/packages/datamash.scm,
  gnu/packages/games.scm, gnu/packages/glib.scm,
  gnu/packages/gnu-pw-mgr.scm, gnu/packages/gnutls.scm,
  gnu/packages/gps.scm, gnu/packages/guile.scm,
  gnu/packages/java.scm, gnu/packages/libevent.scm,
  gnu/packages/linux.scm, gnu/packages/lisp.scm,
  gnu/packages/node.scm, gnu/packages/ntp.scm,
  gnu/packages/orpheus.scm, gnu/packages/pciutils.scm,
  gnu/packages/python.scm, gnu/packages/qt.scm,
  gnu/packages/rsync.scm, gnu/packages/sawfish.scm,
  gnu/packages/scheme.scm, gnu/packages/ssh.scm,
  gnu/packages/statistics.scm, gnu/packages/texlive.scm,
  gnu/packages/wdiff.scm: Adjust accordingly.
2015-03-04 17:23:27 +01:00
Ricardo Wurmus
0e309f1e5b gnu: icedtea6: split outputs.
* gnu/packages/java.scm (icedtea6)[outputs]: Use separate outputs for
  documentation ("doc"), JDK ("jdk"), and JRE ("out").
* gnu/packages/java.scm (ant)[native-inputs]: Reference "jdk" output of
  icedtea6 package.
* gnu/packages/statistics.scm (r)[inputs]: Reference "jdk" output of icedtea6
  package.
2015-03-04 15:59:41 +01:00
Ricardo Wurmus
cb7e486797 gnu: Add R.
* gnu/packages/statistics.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it
* guix/download.scm (%mirrors): Add CRAN mirrors.
2015-02-16 16:35:41 +01:00