Commit graph

79254 commits

Author SHA1 Message Date
Efraim Flashner
c1f7692fca
gnu: Add julia-unpack.
* gnu/packages/julia-xyz.scm (julia-unpack): New variable.
2021-05-20 17:12:25 +03:00
Efraim Flashner
9f3dae8f61
gnu: Add julia-safetestsets.
* gnu/packages/julia-xyz.scm (julia-safetestsets): New variable.
2021-05-20 17:12:25 +03:00
Efraim Flashner
c0f5dd63d0
gnu: Add julia-sortingalgorithms.
* gnu/packages/julia-xyz.scm (julia-sortingalgorithms): New variable.
2021-05-20 17:12:25 +03:00
Efraim Flashner
673bd9a75b
gnu: Add julia-ifelse.
* gnu/packages/julia-xyz.scm (julia-ifelse): New variable.
2021-05-20 17:12:25 +03:00
Efraim Flashner
f2af6d371a
gnu: Add julia-imagemagick-jll.
* gnu/packages/julia-xyz.scm (julia-imagemagick-jll): New variable.
2021-05-20 17:12:24 +03:00
Efraim Flashner
3372c562eb
gnu: Add julia-libtiff-jll.
* gnu/packages/julia-xyz.scm (julia-libtiff-jll): New variable.
2021-05-20 17:12:24 +03:00
Efraim Flashner
f16cf693e9
gnu: Add julia-libpng-jll.
* gnu/packages/julia-xyz.scm (julia-libpng-jll): New variable.
2021-05-20 17:12:24 +03:00
Efraim Flashner
b1cad99e83
gnu: Add julia-zstd-jll.
* gnu/packages/julia-xyz.scm (julia-zstd-jll): New variable.
2021-05-20 17:12:24 +03:00
Efraim Flashner
39dfc10bde
gnu: Add julia-jpegturbo-jll.
* gnu/packages/julia-xyz.scm (julia-jpegturbo-jll): New variable.
2021-05-20 17:12:24 +03:00
Maxim Cournoyer
2b425cf352
gnu: emacs-picpocket: Update to version 41.
Partially resolves <https://issues.guix.gnu.org/47592>.

* gnu/packages/emacs-xyz.scm (emacs-picpocket): Update to version 41.
2021-05-20 10:09:58 -04:00
Ricardo Wurmus
7ff515aa51
gnu: r-rhdf5filters: Update to 1.2.1.
* gnu/packages/bioinformatics.scm (r-rhdf5filters): Update to 1.2.1.
2021-05-20 14:43:34 +02:00
Ricardo Wurmus
1d7470874e
gnu: r-multidataset: Update to 1.18.2.
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.18.2.
2021-05-20 14:43:34 +02:00
Guillaume Le Vaillant
79922038bc
gnu: txr: Update to 259.
* gnu/packages/lisp.scm (txr): Update to 259.
2021-05-20 14:10:31 +02:00
Sharlatan Hellseher
cb789cb43c
gnu: sbcl-flexi-streams: Update to 1.0.19.
* gnu/packages/lisp-xyz.scm (sbcl-flexi-streams): Update to 1.0.19.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-20 14:10:31 +02:00
Sharlatan Hellseher
f8238f9606
gnu: sbcl-fiveam: Update to 1.4.2.
* gnu/packages/lisp-xyz.scm (sbcl-fiveam): Update to 1.4.2.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-20 14:10:31 +02:00
Sharlatan Hellseher
f724e508e3
gnu: sbcl-golden-utils: Update to 0.0.0-3.fe1898f.
* gnu/packages/lisp-xyz.scp (sbcl-golden-utils): Update to 0.0.0-3.fe1898f.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-20 14:10:31 +02:00
Sharlatan Hellseher
7b05665481
gnu: sbcl-numcl: Update to 0.2.0-2.3dcdb0e.
* gnu/packages/lisp-xyz.scm (sbcl-numcl): Update to 0.2.0-2.3dcdb0e.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-20 14:10:31 +02:00
Sharlatan Hellseher
ca23ba4f28
gnu: sbcl-pzmq: Update to 0.0.0-2.6f7b2ca.
* gnu/packages/lisp-xyz.scm (sbcl-pzmq): Update to 0.0.0-2.6f7b2ca.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-20 14:10:31 +02:00
Nicolas Goaziou
71045f4e64
gnu: emacs-org: Update to 9.4.6.
* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.4.6.
[arguments]<phases>: Remove unnecessary phase.
(emacs-org-contrib): Update to 20210519.
2021-05-20 13:58:29 +02:00
Pierre Neidhardt
562727d444
gnu: nyxt: Update to 2.0.0.
* gnu/packages/web-browsers.scm (nyxt): Update to 2.0.0.
[arguments]: Remove useless set-version phase.
[inputs]: Remove unused file-attributes.
[description]: Follow upstream updates.
2021-05-20 12:31:50 +02:00
Pierre Neidhardt
cb68765a58
gnu: sbcl-iolib: Also build iolib/os.
* gnu/packages/lisp-xyz.scm (sbcl-iolib)[arguments]: Add iolib/os to
asd-systems.
2021-05-20 12:31:50 +02:00
Mathieu Othacehe
0471024acc
scripts: challenge: Fix regression.
This is a follow-up of 3cde5231aa that fixes the
challenge test.

When dealing with uncompressed NAR, the file size is false. Propagate it to
progress-reporter/file as it used to be the case.

* guix/scripts/challenge.scm (call-with-nar): Accept false size.
2021-05-20 11:44:35 +02:00
Ricardo Wurmus
7d3ad4c256
gnu: r-lme4: Update to 1.1-27.
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-27.
[propagated-inputs]: Remove r-statmod.
2021-05-20 10:58:18 +02:00
Ricardo Wurmus
afd1391b2a
gnu: r-diptest: Update to 0.76-0.
* gnu/packages/statistics.scm (r-diptest): Update to 0.76-0.
2021-05-20 10:58:18 +02:00
Ricardo Wurmus
c45cdd9035
gnu: r-statmod: Update to 1.4.36.
* gnu/packages/statistics.scm (r-statmod): Update to 1.4.36.
2021-05-20 10:58:18 +02:00
Ricardo Wurmus
e88fef1f43
gnu: r-viridis: Update to 0.6.1.
* gnu/packages/statistics.scm (r-viridis): Update to 0.6.1.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
20ab7a023c
gnu: r-rmarkdown: Update to 2.8.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.8.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
5e46eb05fb
gnu: r-hms: Update to 1.1.0.
* gnu/packages/statistics.scm (r-hms): Update to 1.1.0.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
057b44daa7
gnu: r-devtools: Update to 2.4.1.
* gnu/packages/statistics.scm (r-devtools): Update to 2.4.1.
[propagated-inputs]: Remove r-jsonlite.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
48ba3ab92f
gnu: r-dplyr: Update to 1.0.6.
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.6.
[propagated-inputs]: Add r-pillar.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
0bcf86c35b
gnu: r-tibble: Update to 3.1.2.
* gnu/packages/statistics.scm (r-tibble): Update to 3.1.2.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
f29a1ade9d
gnu: r-stringi: Update to 1.6.2.
* gnu/packages/statistics.scm (r-stringi): Update to 1.6.2.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
bf67249071
gnu: r-matrix: Update to 1.3-3.
* gnu/packages/statistics.scm (r-matrix): Update to 1.3-3.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
cb0ea86dcb
gnu: r-pdftools: Update to 3.0.1.
* gnu/packages/cran.scm (r-pdftools): Update to 3.0.1.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
7361897630
gnu: r-textshaping: Update to 0.3.4.
* gnu/packages/cran.scm (r-textshaping): Update to 0.3.4.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
0df3c20243
gnu: r-seuratobject: Update to 4.0.1.
* gnu/packages/cran.scm (r-seuratobject): Update to 4.0.1.
[propagated-inputs]: Remove r-sctransform.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
428fda3587
gnu: r-rsample: Update to 0.1.0.
* gnu/packages/cran.scm (r-rsample): Update to 0.1.0.
[propagated-inputs]: Add r-lifecycle.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
e033e7c7d4
gnu: r-clusterr: Update to 1.2.4.
* gnu/packages/cran.scm (r-clusterr): Update to 1.2.4.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
65c01f0abb
gnu: r-rfast: Update to 2.0.3.
* gnu/packages/cran.scm (r-rfast): Update to 2.0.3.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
99bdcea1ea
gnu: r-oai: Update to 0.3.2.
* gnu/packages/cran.scm (r-oai): Update to 0.3.2.
[native-inputs]: Add r-knitr.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
e928599671
gnu: r-proxyc: Update to 0.2.0.
* gnu/packages/cran.scm (r-proxyc): Update to 0.2.0.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
630239af23
gnu: r-caret: Update to 6.0-88.
* gnu/packages/cran.scm (r-caret): Update to 6.0-88.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
87bc2e125f
gnu: r-bio3d: Update to 2.4-2.
* gnu/packages/cran.scm (r-bio3d): Update to 2.4-2.
[native-inputs]: Add r-knitr.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
6d73b27e45
gnu: r-terra: Update to 1.2-10.
* gnu/packages/cran.scm (r-terra): Update to 1.2-10.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
1ab7a734ff
gnu: r-systemfonts: Update to 1.0.2.
* gnu/packages/cran.scm (r-systemfonts): Update to 1.0.2.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
3dc2e7b082
gnu: r-ibreakdown: Update to 2.0.1.
* gnu/packages/cran.scm (r-ibreakdown): Update to 2.0.1.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
8c1e07a266
gnu: r-ggplotify: Update to 0.0.7.
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.7.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
72a4b4e34f
gnu: r-msigdbr: Update to 7.4.1.
* gnu/packages/cran.scm (r-msigdbr): Update to 7.4.1.
[propagated-inputs]: Add r-babelgene.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
76cccb0971
gnu: r-pegas: Update to 1.0-1.
* gnu/packages/cran.scm (r-pegas): Update to 1.0-1.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
da372ae603
gnu: r-valr: Update to 0.6.3.
* gnu/packages/cran.scm (r-valr): Update to 0.6.3.
2021-05-20 10:58:16 +02:00