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Author SHA1 Message Date
Ricardo Wurmus
7e1d6bb247
gnu: r-ffbase: Fix build with R 4.3.0. 
* gnu/packages/cran.scm (r-ffbase)[arguments]: Add phase 'r-compatibility.
 2023-04-30 10:57:37 +02:00
Leo Famulari
3b3c7ef1f7
gnu: mod-wsgi: Make sure not to keep a store reference to HTTPD. 
* gnu/packages/web.scm (mod-wsgi)[inputs]: Move httpd ...
[native-inputs]: ... to here.
[arguments]: Forbid keeping a reference to httpd.
 2023-04-30 04:47:19 -04:00
Leo Famulari
bdbf3e36cf
gnu: 389-ds-base: Make sure not to keep a store reference to HTTPD. 
* gnu/packages/openldap.scm (389-ds-base)[inputs]: Move httpd ...
[native-inputs]: ... to here.
[arguments]: Forbid keeping a reference to httpd.
 2023-04-30 04:47:19 -04:00
Leo Famulari
15172a5c1e
gnu: neko: Make sure not to keep a store reference to HTTPD. 
* gnu/packages/haxe.scm (neko): Move httpd ...
[native-inputs]: ... to here.
[arguments]: Forbid keeping a reference to httpd.
 2023-04-30 04:47:19 -04:00
Leo Famulari
3b5b668303
build-system/cmake: Add support for the #:disallowed-references key. 
* guix/build-system/cmake.scm (cmake-build, cmake-cross-build):
Add #:disallowed-references.
 2023-04-30 04:47:18 -04:00
Leo Famulari
d3e91a83b6
gnu: httpd: Update to 2.4.57 [security fixes]. 
Fixes CVE-2023-27522, CVE-2023-25690, CVE-2022-37436, CVE-2022-36760,
CVE-2006-20001, CVE-2022-31813, CVE-2022-30556, CVE-2022-30522,
CVE-2022-29404, CVE-2022-28615, CVE-2022-28614, CVE-2022-28330,
CVE-2022-26377, CVE-2022-23943, CVE-2022-22721, CVE-2022-22720,
and CVE-2022-22719.

* gnu/packages/web.scm (httpd): Update to 2.4.57.
(httpd/pinned): New variable.
* gnu/packages/gnome.scm (libsoup-minimal): Replace httpd with httpd/pinned.
 2023-04-30 04:47:18 -04:00
Ricardo Wurmus
85c137adde
gnu: r-motifstack: Update to 1.44.1. 
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.44.1.
 2023-04-29 23:52:00 +02:00
Ricardo Wurmus
f2ad160acd
gnu: r-chippeakanno: Update to 3.34.1. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.34.1.
 2023-04-29 23:52:00 +02:00
Efraim Flashner
8fe5ed47cb
gnu: rust: Disable support for aarch64-linux, riscv64-linux. 
Support is currently broken and blocks too many other packages.

* gnu/packages/gnome.scm (librsvg-for-system): Only use librsvg on
x86_64-linux.
* gnu/packages/rust.scm (rust-bootstrap)[supported-systems]: Remove
aarch64-linux, riscv64-linux.
 2023-04-29 23:22:30 +03:00
Ricardo Wurmus
8b66099722
gnu: r-norm: Update to 1.0-11.0. 
* gnu/packages/statistics.scm (r-norm): Update to 1.0-11.0.
 2023-04-29 20:28:10 +02:00
Ricardo Wurmus
1d664f404a
gnu: r-lme4: Update to 1.1-33. 
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-33.
 2023-04-29 20:28:10 +02:00
Ricardo Wurmus
eda8cd78b1
gnu: r-sfsmisc: Update to 1.1-15. 
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-15.
 2023-04-29 20:28:10 +02:00
Ricardo Wurmus
3f4b0ff490
gnu: r-checkmate: Update to 2.2.0. 
* gnu/packages/statistics.scm (r-checkmate): Update to 2.2.0.
 2023-04-29 20:28:10 +02:00
Ricardo Wurmus
3f106a8604
gnu: r-xml2: Update to 1.3.4. 
* gnu/packages/statistics.scm (r-xml2): Update to 1.3.4.
 2023-04-29 20:28:10 +02:00
Ricardo Wurmus
55bc3815aa
gnu: r-dplyr: Update to 1.1.2. 
* gnu/packages/statistics.scm (r-dplyr): Update to 1.1.2.
 2023-04-29 20:28:10 +02:00
Ricardo Wurmus
faff9ff1c3
gnu: r-rlang: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-rlang): Update to 1.1.1.
 2023-04-29 20:28:10 +02:00
Ricardo Wurmus
c7950f0f10
gnu: r-microbenchmark: Update to 1.4.10. 
* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4.10.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
5ebe950281
gnu: r-mass: Update to 7.3-59. 
* gnu/packages/statistics.scm (r-mass): Update to 7.3-59.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
5ab7f2d65e
gnu: r-measurements: Update to 1.5.1. 
* gnu/packages/cran.scm (r-measurements): Update to 1.5.1.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
a465cb32c2
gnu: r-vroom: Update to 1.6.3. 
* gnu/packages/cran.scm (r-vroom): Update to 1.6.3.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
eb374d2302
gnu: r-qtl2: Update to 0.32. 
* gnu/packages/cran.scm (r-qtl2): Update to 0.32.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
dea96222c3
gnu: r-qtl: Update to 1.60. 
* gnu/packages/cran.scm (r-qtl): Update to 1.60.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
cf26acef53
gnu: r-yardstick: Update to 1.2.0. 
* gnu/packages/cran.scm (r-yardstick): Update to 1.2.0.
[propagated-inputs]: Add r-cli, r-lifecycle, and r-tibble.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
d361061ec8
gnu: r-spatstat: Update to 3.0-5. 
* gnu/packages/cran.scm (r-spatstat): Update to 3.0-5.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
d016035a93
gnu: r-spatstat-model: Update to 3.2-3. 
* gnu/packages/cran.scm (r-spatstat-model): Update to 3.2-3.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
33a3f6e8ea
gnu: r-scatterpie: Update to 0.1.9. 
* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.9.
[propagated-inputs]: Add r-dplyr.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
7b80d7e17f
gnu: r-rcdd: Update to 1.5-2. 
* gnu/packages/cran.scm (r-rcdd): Update to 1.5-2.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
2b3c9a317b
gnu: r-snowballc: Update to 0.7.1. 
* gnu/packages/cran.scm (r-snowballc): Update to 0.7.1.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
86fc50f544
gnu: r-rgdal: Update to 1.6-6. 
* gnu/packages/cran.scm (r-rgdal): Update to 1.6-6.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
a5b43d7ace
gnu: r-parameters: Update to 0.21.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.21.0.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
86de3bd06e
gnu: r-terra: Update to 1.7-29. 
* gnu/packages/cran.scm (r-terra): Update to 1.7-29.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
c96ed127f6
gnu: r-batchtools: Update to 0.9.17. 
* gnu/packages/cran.scm (r-batchtools): Update to 0.9.17.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
c3480bb230
gnu: r-s2: Update to 1.1.3. 
* gnu/packages/cran.scm (r-s2): Update to 1.1.3.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
4112f16267
gnu: r-units: Update to 0.8-2. 
* gnu/packages/cran.scm (r-units): Update to 0.8-2.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
f10e101b46
gnu: r-epi: Update to 2.47.1. 
* gnu/packages/cran.scm (r-epi): Update to 2.47.1.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
e7c6893684
gnu: r-longdat: Update to 1.1.1. 
* gnu/packages/cran.scm (r-longdat): Update to 1.1.1.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
7e0db06005
gnu: r-rmpfr: Update to 0.9-2. 
* gnu/packages/cran.scm (r-rmpfr): Update to 0.9-2.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
f290020027
gnu: r-bigrquery: Update to 1.4.2. 
* gnu/packages/cran.scm (r-bigrquery): Update to 1.4.2.
[propagated-inputs]: Add r-cli and r-withr.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
26405096ab
gnu: r-ouch: Update to 2.19. 
* gnu/packages/cran.scm (r-ouch): Update to 2.19.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
acad588a3c
gnu: r-afex: Update to 1.3-0. 
* gnu/packages/cran.scm (r-afex): Update to 1.3-0.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
d3c2b0d0e9
gnu: r-fs: Update to 1.6.2. 
* gnu/packages/cran.scm (r-fs): Update to 1.6.2.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
0a43d0b919
gnu: r-tmb: Update to 1.9.4. 
* gnu/packages/cran.scm (r-tmb): Update to 1.9.4.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
9c1797abce
gnu: r-th-data: Update to 1.1-2. 
* gnu/packages/cran.scm (r-th-data): Update to 1.1-2.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
b7047d045d
gnu: r-targets: Update to 1.0.0. 
* gnu/packages/cran.scm (r-targets): Update to 1.0.0.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
92182dd404
gnu: r-cmplot: Update to 4.3.1. 
* gnu/packages/cran.scm (r-cmplot): Update to 4.3.1.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
7ae99d8446
gnu: r-nodbi: Update to 0.9.3. 
* gnu/packages/cran.scm (r-nodbi): Update to 0.9.3.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
207d51639e
gnu: r-rjags: Update to 4-14. 
* gnu/packages/cran.scm (r-rjags): Update to 4-14.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
134b94c432
gnu: r-zip: Update to 2.3.0. 
* gnu/packages/cran.scm (r-zip): Update to 2.3.0.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
20d775f622
gnu: r-tinytex: Update to 0.45. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.45.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
f471eb86c3
gnu: r-vctrs: Update to 0.6.2. 
* gnu/packages/cran.scm (r-vctrs): Update to 0.6.2.
 2023-04-29 20:28:08 +02:00