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Author SHA1 Message Date
Tobias Geerinckx-Rice
fd3ae040cf
gnu: python-gipc: Use HTTPS home page. 
* gnu/packages/python-xyz.scm (python-gipc)[home-page]: Use HTTPS.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
d3d73bd650
gnu: python-seaborn: Update & use HTTPS home page. 
* gnu/packages/python-xyz.scm (python-seaborn)[home-page]: Follow
redirection, but use HTTPS.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
5d6e7106e1
gnu: python-vobject: Use HTTPS home page. 
* gnu/packages/python-xyz.scm (python-vobject)[home-page]: Use HTTPS.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
26827dfe36
gnu: python-activepapers: Use HTTPS home page. 
* gnu/packages/python-xyz.scm (python-activepapers)[home-page]:
Use HTTPS.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
f894ffd867
gnu: tome4: Update to 1.6.7. 
* gnu/packages/games.scm (tome4): Update to 1.6.7.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
bcea20cc90
gnu: shotwell: Update to 0.30.8. 
* gnu/packages/gnome.scm (shotwell): Update to 0.30.8.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
5decb16015
gnu: gmime: Update to 3.2.6. 
* gnu/packages/mail.scm (gmime): Update to 3.2.6.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
363fe78af1
gnu: liblo: Update to 0.31. 
* gnu/packages/audio.scm (liblo): Update to 0.31.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
46b39ce835
gnu: fish: Don't use NAME in source URI. 
* gnu/packages/shells.scm (fish)[source]: Hard-code NAME.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
848be51c88
gnu: gptfdisk: Update to 1.0.5. 
* gnu/packages/disk.scm (gptfdisk): Update to 1.0.5.
[source]: Hard-code NAME.
[arguments]: Add ‘fix-include-directory’ phase.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
0e08ca1454
gnu: amtk: Update to 5.0.2. 
* gnu/packages/gnome.scm (amtk): Update to 5.0.2.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
e82cf6c687
gnu: notmuch: Extend test time-out. 
* gnu/packages/mail.scm (notmuch)[arguments]:
Add NOTMUCH_TEST_TIMEOUT=1h make flag.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
5815531202
gnu: oil-shell: Update to 0.7.0. 
* gnu/packages/shells.scm (oil-shell): Update to 0.7.0.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
efebdf3a66
gnu: serd: Update to 0.30.2. 
* gnu/packages/rdf.scm (serd): Update to 0.30.2.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
78fca23163
gnu: python-pyudev: Update to 0.22.0. 
* gnu/packages/admin.scm (python-pyudev): Update to 0.22.0.
 2020-03-03 05:05:47 +01:00
Leo Famulari
6ce0865500
gnu: Go: Update to 1.13.8. 
* gnu/packages/golang.scm (go-1.13): Update to 1.13.8.
 2020-03-02 19:30:26 -05:00
Marius Bakke
15a6805751
gnu: Add system test for CUPS. 
* gnu/tests/cups.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
 2020-03-02 23:39:44 +01:00
Marius Bakke
1f8838d1f6
gnu: libgc: Fix replacement inheritance. 
* gnu/packages/bdw-gc.scm (libgc-8.0): Do not use PACKAGE/INHERIT, because it
does not make sense to inherit any replacements of LIBGC.
(libgc/back-pointers): Use PACKAGE/INHERIT.
 2020-03-02 23:39:44 +01:00
Ricardo Wurmus
1e07875b57
gnu: Add r-zseq. 
* gnu/packages/cran.scm (r-zseq): New variable.
 2020-03-02 23:05:49 +01:00
Ricardo Wurmus
02366a12d0
gnu: Add r-ztype. 
* gnu/packages/cran.scm (r-ztype): New variable.
 2020-03-02 23:05:49 +01:00
Ricardo Wurmus
11ab52888d
gnu: Add r-zvcv. 
* gnu/packages/cran.scm (r-zvcv): New variable.
 2020-03-02 23:05:49 +01:00
Ricardo Wurmus
505d6716d0
gnu: Add r-zyp. 
* gnu/packages/cran.scm (r-zyp): New variable.
 2020-03-02 23:05:49 +01:00
Ricardo Wurmus
7316f137dc
gnu: Add r-kendall. 
* gnu/packages/cran.scm (r-kendall): New variable.
 2020-03-02 23:05:49 +01:00
Maxim Cournoyer
1639e0b7b6
gnu: python-smmap: Update to version 3.0.1, deprecate python-smmap2. 
* gnu/packages/python-xyz.scm (python-smmap): Rename from python-smmap2, and
update to version 3.0.1.
(python-smmap2, python2-smmap2): Preserve original bindings, marked as
deprecated.
* gnu/packages/version-control.scm (python-gitdb)[propagated-inputs]: Depend
on the new python-smmap package.
 2020-03-02 17:03:03 -05:00
Maxim Cournoyer
166dbbb012
gnu: python-gitpython: Update to 3.1.0. 
* gnu/packages/version-control.scm (python-gitpython): Update to 3.1.0.
 2020-03-02 17:03:03 -05:00
Maxim Cournoyer
cbe4272e6f
gnu: python-gitdb: Update to 4.0.2. 
* gnu/packages/version-control.scm (python-gitdb): Update to 4.0.2.
[source]: Correct the PyPI URL to refer to the actual gitdb package, not a
mirror.  This mirror had a problematic setup.py install requirement that
required gitdb>=4.0.1, which would cause run time errors when using snakemake.
 2020-03-02 17:03:03 -05:00
Maxim Cournoyer
357af7f283
gnu: python-pyyaml: Update to 5.3. 
* gnu/packages/python-xyz.scm (python-pyyaml): Update to 5.3.
 2020-03-02 17:03:02 -05:00
Maxim Cournoyer
8c06d6d8ce
gnu: python-xenon: Update to 0.7.0. 
* gnu/packages/python-xyz.scm (python-xenon): Update to 0.7.0.
[arguments]: Set #:tests? to #f to disable test suite.
 2020-03-02 17:03:02 -05:00
Maxim Cournoyer
f675ab4faf
gnu: python-radon: Update to 4.1.0. 
* gnu/packages/python-xyz.scm (python-radon): Update to 4.1.0.
 2020-03-02 17:03:02 -05:00
Maxim Cournoyer
bd13705540
gnu: python-colorama: Update to 0.4.3. 
* gnu/packages/python-xyz.scm (python-colorama): Update to 0.4.3.
 2020-03-02 17:03:02 -05:00
Maxim Cournoyer
9c9704a9d7
gnu: Add python-wget. 
* gnu/packages/python-xyz.scm (python-wget): New variable.
 2020-03-02 17:03:02 -05:00
Nicolas Goaziou
1eee899617
gnu: emacs-windower: Fix description. 
* gnu/packages/emacs-xyz.scm (emacs-windower): Fix Texinfo code for lists in
description.
 2020-03-02 22:59:57 +01:00
Ricardo Wurmus
7a4b2da48f
gnu: r-forcats: Update to 0.5.0. 
* gnu/packages/statistics.scm (r-forcats): Update to 0.5.0.
 2020-03-02 21:53:49 +01:00
Ricardo Wurmus
3f809fe875
gnu: r-testthat: Update to 2.3.2. 
* gnu/packages/statistics.scm (r-testthat): Update to 2.3.2.
 2020-03-02 21:53:48 +01:00
Ricardo Wurmus
d82a17ebaa
gnu: r-openmx: Update to 2.17.3. 
* gnu/packages/cran.scm (r-openmx): Update to 2.17.3.
 2020-03-02 21:53:48 +01:00
Ricardo Wurmus
2d063d4535
gnu: r-summarytools: Update to 0.9.6. 
* gnu/packages/cran.scm (r-summarytools): Update to 0.9.6.
 2020-03-02 21:53:48 +01:00
Ricardo Wurmus
bbba65e269
gnu: r-officer: Update to 0.3.7. 
* gnu/packages/cran.scm (r-officer): Update to 0.3.7.
[propagated-inputs]: Remove r-base64enc, r-htmltools, r-rcpp, and r-rlang.
 2020-03-02 21:53:48 +01:00
Ricardo Wurmus
1284df4ef6
gnu: r-seqminer: Update to 8.0. 
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 8.0.
 2020-03-02 21:53:48 +01:00
Tobias Geerinckx-Rice
b4034d1bc4
gnu: ecl-clunit: Use HTTPS home page. 
* gnu/packages/lisp-xyz.scm (ecl-clunit)[home-page]: Use HTTPS.
 2020-03-02 21:46:27 +01:00
Tobias Geerinckx-Rice
711ebe771e
gnu: mapnik: Use HTTPS home page. 
* gnu/packages/geo.scm (mapnik)[home-page]: Use HTTPS.
 2020-03-02 21:46:27 +01:00
Tobias Geerinckx-Rice
4e5ad79e4d
gnu: python-rq: Use HTTPS home page. 
* gnu/packages/databases.scm (python-rq)[home-page]: Use HTTPS.
 2020-03-02 21:46:27 +01:00
Tobias Geerinckx-Rice
35e74723b5
gnu: java-plexus-interpolation: Use HTTPS home page. 
* gnu/packages/java.scm (java-plexus-interpolation)[home-page]: Use HTTPS.
 2020-03-02 21:46:27 +01:00
Tobias Geerinckx-Rice
c99f0e5780
gnu: amsynth: Use HTTPS home page. 
* gnu/packages/music.scm (amsynth)[home-page]: Use HTTPS.
 2020-03-02 21:46:27 +01:00
Tobias Geerinckx-Rice
a369682826
gnu: pootle: Use HTTPS home page. 
* gnu/packages/django.scm (pootle)[home-page]: Use HTTPS.
 2020-03-02 21:46:27 +01:00
Tobias Geerinckx-Rice
9bbb492042
gnu: muse-sequencer: Update home page. 
* gnu/packages/music.scm (muse-sequencer)[home-page]: Follow (HTTPS)
redirection.
 2020-03-02 21:46:27 +01:00
Tobias Geerinckx-Rice
ba6b48b84f
gnu: opensmtpd: Support ECDSA certificates. 
The required libressl version is now stable and more featureful than
openssl.

* gnu/packages/mail.scm (opensmtpd)[inputs]: Replace openssl with libressl.
 2020-03-02 21:46:27 +01:00
Tobias Geerinckx-Rice
0250672b97
gnu: libressl: Update to 3.0.2. 
* gnu/packages/tls.scm (libressl): Update to 3.0.2.
 2020-03-02 21:46:27 +01:00
Tobias Geerinckx-Rice
b69c770305
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Update to 3.10.0. 
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene): Update to 3.10.0.
 2020-03-02 21:46:27 +01:00
Nicolas Goaziou
45a2636a0b
gnu: emacs-modus-themes: Update to 0.6.0. 
* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 0.6.0.
 2020-03-02 21:37:15 +01:00
Leo Famulari
8e1f5aaba2
gnu: Syncthing: Fix installation of the 'util' package output. 
* gnu/packages/syncthing.scm (syncthing)[arguments]: Adjust the 'install' phase.
 2020-03-02 15:36:21 -05:00