The bug freeing static memory and the makefile have been improved upstream, so
we don't have to work around them anymore. Now, two static libraries are built
instead.
* gnu/packages/chemistry.scm (avalon-toolkit): Update to 2.0.5a.
[source]: Switch to git reference from GitHub. Adjust snippet. Add patch from
the RDKit fork.
[arguments]: Remove 'dont-free-static-memory phase. Use provided
makefile. Adjust 'install phase.
* gnu/packages/patches/avalon-toolkit-rdkit-fixes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu/packages/chemistry.scm (gemmi): Update to 0.6.4.
[arguments]: Adjust include/gemmi/sprintf.hpp -> src/sprintf.cpp.
(freesasa)[arguments]: Link to gemmi_cpp explicitly.
Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu/packages/backup.scm (disarchive): Update to 0.6.0; add
'guile-bzip2' as an input.
* gnu/packages/package-management.scm (guix): Add 'guile-bzip2' as
an input to enable bzip2 support when using Disarchive.
* guix/self.scm (%packages): Add 'guile-bzip2'.
(compiled-guix): Include 'guile-bzip2' as a dependency when building
the 'guix' command.
* etc/disarchive-manifest.scm (tarball-origin?): Include bzip2
tarballs.
Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
Change-Id: I4da479054f6bef225f5ea979c091152f8a9e51d5
* gnu/packages/networking.scm (nebula) [arguments]: Use G-expressions.
<#:phases>: Set version during build time.
Change-Id: I0cda81f952e3543ac2a01d5d917df4944ac82950
This is a new version of go-github-com-imdario-mergo. It was renamed and
now used as dario.cat/mergo in tests and other places.
* gnu/packages/golang.scm (go-dario-cat-mergo): New variable.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I10cf6c962441535493889820543d29a9a9b20e98
* gnu/packages/syncthing.scm (go-github-com-stathat-go): Move from here ...
* gnu/packages/golang-xyz.scm: ... to here.
Change-Id: I804043f512b60665233fba61da3f2225042d8d65
* gnu/packages/syncthing.scm (go-github-com-rcrowley-go-metrics): Move
from here ...
* gnu/packages/golang-xyz.scm: ... to here.
Change-Id: Id153e4b8295c1430077941c5e4ee854ef28a56fa
This test no longer fails in future versions, so this is only a temporary
workaround.
* gnu/packages/gnome.scm (mutter)[arguments]: Conditionally disable the
activation test on i686-linux.
Change-Id: Ic8552355971b9926b7f72c228edf881a1c0cea1e
* guix/build/git.scm (git-fetch-with-fallback): Add #:hash
and #:hash-algorithm. Try ‘swh-download-directory-by-nar-hash’ before
‘swh-download’ when #:hash is provided.
* guix/git-download.scm (git-fetch/in-band*): Pass #:hash
and #:hash-algorithm to ‘git-fetch-with-fallback’.
* guix/scripts/perform-download.scm (perform-git-download): Likewise.
Change-Id: Ic875a7022fd78c9fac32e92ad4f8ce4d81646ec5
While this method is new and nar-sha256 ExtIDs are currently available
only for new visits, it is fundamentally more reliable than the other
methods, which is why it comes first.
* guix/lint.scm (check-archival)[lookup-by-nar-hash]: New procedure.
Call ‘lookup-by-nar-hash’ before the other lookup methods.
* tests/lint.scm ("archival: content available")
("archival: content unavailable but disarchive available")
("archival: missing revision")
("archival: revision available"): Add a 404 response corresponding to
the ‘lookup-external-id’ request.
* tests/lint.scm ("archival: nar-sha256 extid available"): New test.
Change-Id: I4a81d6e022a3b72e6484726549d7fbae627f8e73
This allows us to take advantage of content addressing by giving SWH the
expected nar hash.
* guix/swh.scm (swh-download-directory-by-nar-hash): New procedure.
Change-Id: I0494ee15a3cde390a22552de7c2246e0314ba7b5
This interface was deployed at archive.softwareheritage.org a few days
ago. Our main use case will be looking up directories by “nar-sha256”
hashes.
* guix/swh.scm (<external-id>): New JSON-mapped record type.
(lookup-external-id, lookup-directory-by-nar-hash): New procedures.
* tests/swh.scm (%external-id): New variable.
("lookup-directory-by-nar-hash"): New test.
Change-Id: Ib671c7798aeb6f8132ac78f2b06b9285da8e7bd5
Previously the command would crash when passed an invalid fingerprint on
the command line.
* guix/scripts/git/authenticate.scm (guix-git-authenticate)
[openpgp-fingerprint*]: New procedure.
Use it instead of ‘openpgp-fingerprint’.
Change-Id: I99e0549781382f36a684a84449b603e00b53778d
So far the partition had too little free space.
* gnu/services/virtualization.scm (%default-virtual-build-machine-image-size):
New variable.
(virtual-build-machine-default-image): Define ‘partitions’ field.
Change-Id: Iffe0f316eecad8754d29f8c811cdc4836a818a3f
This provides /dev/pts and other things that are important for
builds (for example, Python 2.x has ‘openpty’ unit tests that can only
succeed when /dev/pts is available.)
* gnu/services/virtualization.scm (%virtual-build-machine-operating-system)
[file-systems]: Add %BASE-FILE-SYSTEMS.
Change-Id: I7d12a4cb491e957bf55e6c5f9dd09c013473ca42
vpn-slice expects commands "ip" and "iptables" to be found according to FHS
paths.
* gnu/packages/vpn.scm (vpn-slice)[arguments]: Include inputs "iproute" and
"iptables" and patch "vpn_slice/linux.py" to use correct locations in the
store.
Change-Id: Ia06e2bb99f060108cc0758e89174294bcbb2848d
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu/packages/music.scm (abjad-ext-rmakers) [build-system]: Swap to
pyproject-build-system.
[arguments]: Use standard 'check phase.
Change-Id: Ic2591fbe35d7479e120048d334cc202a5e1c9243
* gnu/packages/music.scm (abjad-ext-nauert) [build-system]: Swap to
pyproject-build-system.
[arguments]: Use standard 'check phase.
Change-Id: Ica32dd692964d200a81628e82a8333656dc10170
* gnu/packages/python-check.scm (python-pytest-csv) [build-system]: Swap
to pyproejct-build-system.
[arguments]: Use standard 'check phase.
Change-Id: Iae04747b117bf5b5f9fb3c8b57cd40b8822edd77
* gnu/packages/python-check.scm (python-beartype) [build-system]: Swap
to pyproject-build-system.
[arguments]: Use standard 'check phase and <#:test-flags>.
Change-Id: I372c5be3b142f0e25d15fd2bac20fc9cd4d8030c
