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Author SHA1 Message Date
Ricardo Wurmus
d0bd632f89 import: Add Bioconductor importer and updater. 
* guix/import/cran.scm (%bioconductor-updater,
latest-bioconductor-release, bioconductor-package?): New procedures.
(cran->guix-package): Support repositories other than CRAN.
(%bioconductor-url, %bioconductor-svn-url): New variables.
(description->package): Update signature to distinguish between packages
from different repositories.
(latest-release): Rename procedure ...
(latest-cran-release): ... to this.
(cran-package?): Do not assume all R packages are available on CRAN.
* tests/cran.scm: Update tests.
* guix/scripts/import/cran.scm: Add "--archive" option and default to
CRAN.
* guix/scripts/refresh.scm (%updaters): Add "%bioconductor-updater".
* doc/guix.texi: Document Bioconductor importer and updater.
 2016-01-20 12:41:28 +01:00
Efraim Flashner
4c3d2b2a8f gnu: enlightenment: Update to 0.20.3. 
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.20.3.
 2016-01-20 12:37:21 +02:00
Efraim Flashner
0568dbabe0 gnu: libshout: Update to 2.4.1. 
* gnu/packages/xiph.scm (libshout): Update to 2.4.1.
 2016-01-20 02:12:23 +02:00
Efraim Flashner
1c3d37e648 gnu: opusfile: Update to 0.7. 
* gnu/packages/xiph.scm (opusfile): Update to 0.7.
 2016-01-20 02:12:23 +02:00
Efraim Flashner
275cc09280 gnu: opus: Update to 1.1.2. 
* gnu/packages/xiph.scm (opus): Update to 1.1.2.
 2016-01-20 02:12:23 +02:00
Eric Bavier
252ddedd4b build-system/haskell: Fix package.conf parsing. 
* guix/build/haskell-build-system.scm (register)[conf-depends]: Properly
  react to EOF while reading GHC package conf files.
 2016-01-19 18:01:07 -06:00
Ludovic Courtès
55ca5e8095 gnu: lilypond: Double 'max-silent-time'. 
Suggested by Mark H Weaver <mhw@netris.org>.

* gnu/packages/music.scm (lilypond)[properties]: New field.
 2016-01-19 22:14:15 +01:00
Ludovic Courtès
af46761302 hydra: Honor the 'max-silent-time' package property. 
Suggested by Mark H Weaver <mhw@netris.org>.

* build-aux/hydra/gnu-system.scm (package->alist): Add
'max-silent-time' pair.
 2016-01-19 22:12:11 +01:00
Ludovic Courtès
f495301902 guix build: Add '--keep-going'. 
* guix/scripts/build.scm (show-build-options-help)
(%standard-build-options): Add --keep-going.
* guix/scripts/build.scm (set-build-options-from-command-line): Honor
it.
* doc/guix.texi (Invoking guix build): Document it.
 2016-01-19 21:59:58 +01:00
Ludovic Courtès
0e510971c3 derivations: Add test in keep-going mode. 
* tests/derivations.scm ("derivation fails but keep going"): New test.
 2016-01-19 21:59:58 +01:00
Christopher Allan Webber
16966d5b4d gnu: fdm: Adjust license link to point to web-accessible copy of command.c 
* gnu/packages/mail.scm (fdm): Adjusted license field
 2016-01-19 07:54:18 -08:00
Christopher Allan Webber
34dd26af49 gnu: Add fdm. 
* gnu/packages/mail.scm (fdm): New variable.
 2016-01-18 21:51:45 -08:00
Mark H Weaver
afe9f40949 Merge branch 'master' into core-updates 2016-01-19 00:18:37 -05:00
Christopher Allan Webber
1348185ac2 gnu: Add linux-libre-4.2.5 
* gnu/packages/linux.scm (linux-libre-4.2.5): New variable.
 2016-01-18 15:10:38 -08:00
Ludovic Courtès
aac783cac5 build: Remove traces of 'NIX_SETUID_HELPER'. 
This is a followup to 0919f5f4.

* test-env.in: Remove occurrences of 'NIX_SETUID_HELPER'.
 2016-01-18 23:52:13 +01:00
Efraim Flashner
26da7c2606 gnu: mpv: Update to 0.15.0. 
* gnu/packages/video.scm (mpv): Update to 0.15.0.
 2016-01-18 22:26:56 +02:00
Alex Kost
60edbe2297 gnu: magit: Update to 2.4.0. 
* gnu/packages/emacs.scm (magit): Update to 2.4.0.
 2016-01-18 22:40:33 +03:00
Alex Kost
d44d60d211 gnu: sxiv: Update to 1.3.2. 
* gnu/packages/sxiv.scm (sxiv): Update to 1.3.2.
 2016-01-18 22:40:33 +03:00
Alex Kost
4c896c9195 gnu: manaplus: Update to 1.6.1.16. 
* gnu/packages/games.scm (manaplus): Update to 1.6.1.16.
 2016-01-18 22:40:33 +03:00
Ludovic Courtès
e0c941fefa doc: Document 'http_proxy'. 
* doc/guix.texi (Build Environment Setup, Substitutes): Document
'http_proxy'.
 2016-01-18 17:41:16 +01:00
Ludovic Courtès
44ad33843a derivations: Add test for #:leaked-env-vars. 
* tests/derivations.scm ("derivation #:leaked-env-vars"): New test.
 2016-01-18 17:41:16 +01:00
Ludovic Courtès
a887fd8d48 doc: Explain how to run a subset of the tests. 
* doc/guix.texi (Running the Test Suite): Explain 'TESTS'.
 2016-01-18 17:41:16 +01:00
Alex Kost
27a2e48337 emacs: Add 'guix-search-by-name'. 
* emacs/guix-ui-package.el (guix-search-by-name): New command.
* doc/emacs.texi (Emacs Commands): Document it.
 2016-01-18 19:11:46 +03:00
Alex Kost
e119ba9008 emacs: Rename 'guix-search-by-name' to 'guix-packages-by-name'. 
* emacs/guix-ui-package.el (guix-search-by-name): Rename to...
  (guix-packages-by-name): ... this.  Complete package name.
* doc/emacs.texi (Emacs Commands): Likewise.
 2016-01-18 19:11:46 +03:00
Efraim Flashner
264ae686fa python2-jsonschema: Add python2-functools32 to inputs. 
* gnu/packages/python.scm (python2-jsonschema)[inputs]: Add
python2-functools32.
(python2-wheel)[native-inputs]: Specify python2-jsonschema. Add
python2-functools32.
(python2-requests)[propagated-inputs]: Specify python2-wheel.
(python2-ipython)[inputs]: Specify python2-jsonschema, python2-requests.
(python2-rauth)[propagated-inputs]: Specify python2-requests.
* gnu/packages/openstack.scm (python2-requests-mock)[propagated-inputs]:
Specify python2-requests.
(python2-tempest-lib)[propagated-inputs]: Specify python2-jsonschema.
(python2-oslosphinx)[propagated-inputs]: Specify python2-requests.
(python2-keystoneclient)[porpagated-inputs]: Specify python2-requests.
[native-inputs]: Specify python2-oslosphinx, python2-requests-mock,
python2-tempest-lib.
(python2-swiftclient)[propagated-inputs]: Specify python2-requests,
python2-oslosphinx.
 2016-01-18 17:23:37 +02:00
Efraim Flashner
058247efff gnu: datamash: Update to 1.1.0. 
* gnu/packages/datamash.scm (datamash): Update to 1.1.0.
 2016-01-18 12:14:20 +02:00
Taylan Ulrich Bayırlı/Kammer
de6af32783 build: Speed up .go compilation. 
* build-aux/compile-all.scm: New file.
* Makefile.am (EXTRA_DIST): Add it.
(%.go, make-go): New rules.
 2016-01-18 08:57:55 +01:00
Mark H Weaver
8047d13dcf gnu: mariadb: Update to 10.0.23. 
* gnu/packages/databases.scm (mariadb): Update to 10.0.23.
 2016-01-18 01:43:07 -05:00
Mark H Weaver
51a277d8e8 gnu: rsync: Update to 3.1.2. 
* gnu/packages/rsync.scm (rsync): Update to 3.1.2.
 2016-01-17 21:44:31 -05:00
Ricardo Wurmus
e8309291a7 gnu: solfege: Build scores with Lilypond. 
* gnu/packages/music.scm (solfege)[inputs]: Add "lilypond".
 2016-01-17 22:57:58 +01:00
Ricardo Wurmus
18ef998bfc gnu: bristol: Remove SSE flags on platforms other than x86_64 and i686. 
* gnu/packages/music.scm (bristol)[arguments]: Add phase
"remove-sse-flags" to remove unsupported optimizations on platforms
other than x86_64 and i686.
 2016-01-17 22:57:58 +01:00
Ludovic Courtès
b153f9f0a9 linux-initrd: Remove "usbkbd" from the default set of modules. 
Reported by Ricardo Wurmus <rekado@elephly.net>
at <http://debbugs.gnu.org/cgi/bugreport.cgi?bug=20433#39>.

* gnu/system/linux-initrd.scm (base-initrd): Remove "usbkbd".
 2016-01-17 22:01:47 +01:00
Efraim Flashner
e8d2168c27 gnu: Add git-annex-remote-hubic. 
* gnu/packages/version-control.scm (git-annex-remote-hubic): New variable.
 2016-01-17 22:37:04 +02:00
Efraim Flashner
c18f636823 gnu: Add python-urllib3. 
* gnu/packages/python.scm (python-urllib3, python2-urllib3): New variables.
 2016-01-17 22:37:04 +02:00
Efraim Flashner
e1ba074999 gnu: python-wheel: Clarify description. 
* gnu/packages/python.scm (python-wheel): Do it.
 2016-01-17 22:37:04 +02:00
Efraim Flashner
10468636ff gnu: python-pytest-cov: Clarify description. 
* gnu/packages/python.scm (python-pytest-cov): Do it.
 2016-01-17 22:37:04 +02:00
Efraim Flashner
1abe448d56 gnu: Add python2-functools32. 
* gnu/packages/python.scm (python2-functools32): New variable.
 2016-01-17 22:37:04 +02:00
Efraim Flashner
5988c299c4 gnu: Add python-pyasn1-modules. 
* gnu/packages/python.scm (python-pyasn1-modules)
(python2-pyasn1-modules): New variables.
 2016-01-17 22:37:04 +02:00
Efraim Flashner
81f7f29752 gnu: Add python-rauth. 
* gnu/packages/python.scm (python-rauth, python2-rauth): New variables.
 2016-01-17 22:37:04 +02:00
Efraim Flashner
8f0cc2ffce gnu: Add python-swiftclient. 
* gnu/packages/openstack.scm (python-swiftclient, python2-swiftclient):
New variables.
 2016-01-17 22:37:04 +02:00
Efraim Flashner
7a5b944eb5 gnu: Add python-futures. 
* gnu/packages/python.scm (python-futures, python2-futures): New variables.
 2016-01-17 22:37:04 +02:00
Efraim Flashner
c9e330d001 gnu: Add python-keystoneclient. 
* gnu/packages/openstack.scm (python-keystoneclient)
(python2-keystoneclient): New variables.
 2016-01-17 22:37:04 +02:00
Ricardo Wurmus
fb492b9a64 gnu: vmpk: Update to 0.6.2a. 
* gnu/packages/music.scm (vmpk): Update to 0.6.2a.
 2016-01-17 19:57:07 +01:00
Ricardo Wurmus
cfac12723a gnu: drumstick: Update to 1.0.2. 
* gnu/packages/music.scm (drumstick): Update to 1.0.2.
 2016-01-17 19:57:00 +01:00
Efraim Flashner
81c29cccaa gnu: mpv: Add features. 
* gnu/packages/video.scm (mpv)[inputs]: Add libvdpau.
[arguments]: Add gpl3 and zsh completion flags.
 2016-01-17 20:43:51 +02:00
Efraim Flashner
3161d32d37 gnu: Add vdpauinfo. 
* gnu/packages/video.scm (vdpauinfo): New variable.
 2016-01-17 20:43:51 +02:00
Efraim Flashner
d5650f86a7 gnu: Add libvdpau. 
* gnu/packages/video.scm (libvdpau): New variable.
 2016-01-17 20:43:51 +02:00
Ludovic Courtès
bb8afbf5a1 gnu: Add dependency on Perl's 'Module::Build' as needed. 
'Module::Build' was deprecated in Perl 5.20 and removed in 5.22.
Some packages need to explicitly depend on it now.

* gnu/packages/perl.scm (perl-class-factory-util):
(perl-date-manip, perl-devel-checkbin): Add 'native-inputs' field.
(perl-module-build)[description]: Mention that it used to be in Perl.
* gnu/packages/web.scm (perl-cgi-simple)[native-inputs]: Add
PERL-MODULE-BUILD.
 2016-01-17 18:41:20 +01:00
Eric Bavier
2328b47c64 gnu: Add autojump. 
* gnu/packages/admin.scm (autojump): New variable.
 2016-01-17 01:44:15 -06:00
Eric Bavier
f5a8491b69 gnu: hevea: Update to 2.28. 
* gnu/packages/ocaml.scm (hevea): Update to 2.28.
  [arguments]: Add 'patch-/bin/sh phase.
 2016-01-17 01:04:43 -06:00