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Author SHA1 Message Date
Marius Bakke
7699e32289
gnu: kentutils: Build with OpenSSL 1.0. 
* gnu/packages/bioinformatics.scm (kentutils)[inputs]: Change from OPENSSL to
OPENSSL-1.0.
 2020-01-16 19:20:20 +01:00
Marius Bakke
cbd3e73f06
gnu: poetry: Remove redundant input. 
* gnu/packages/python-xyz.scm (poetry)[propagated-inputs]: Remove PYTHON-PATHLIB2.
 2020-01-16 19:20:20 +01:00
Marius Bakke
bd8c62dbd1
gnu: python-zipp: Remove redundant inputs. 
The Python 3 variant do not need these.

* gnu/packages/python-compression.scm (python-zipp)[native-inputs]: Remove
PYTHON-CONTEXTLIB2, PYTHON-PATHLIB2, and PYTHON-UNITTEST2.
[properties]: New field.
(python2-zipp)[native-inputs]: Add PYTHON2-CONTEXTLIB2, PYTHON2-PATHLIB2, and
PYTHON2-UNITTEST2.
 2020-01-16 19:20:20 +01:00
Efraim Flashner
1c70205f82
gnu: rust-scopeguard-1.0: Don't hide package. 
* gnu/packages/crates-io.scm (rust-scopeguard-1.0)[arguments]: Skip
build.
[properties]: Remove field.
 2020-01-16 19:36:27 +02:00
Efraim Flashner
ac20ab2b4e
gnu: rust-scopeguard-0.3: Don't hide package. 
* gnu/packages/crates-io.scm (rust-scopeguard-0.3)[arguments]: Skip
build.
[properties]: Don't inherit field.
 2020-01-16 19:36:27 +02:00
Efraim Flashner
671d08f30d
gnu: rust-scoped-tls-1.0: Don't hide package. 
* gnu/packages/crates-io.scm (rust-scoped-tls-1.0)[arguments]: Skip
build.
[properties]: Remove field.
 2020-01-16 19:36:26 +02:00
Efraim Flashner
fcc4e04d22
gnu: rust-scoped-tls-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-scoped-tls-0.1)[arguments]: Skip
build.
[properties]: Don't inherit field.
 2020-01-16 19:36:26 +02:00
Efraim Flashner
fe195ef7d3
gnu: rust-getopts-0.2: Update to 0.2.21. 
* gnu/packages/crates-io.scm (rust-getopts-0.2): Update to 0.2.21.
[arguments]: Add rust-unicode-width-0.1,
rust-rustc-std-workspace-core-1.0, rust-rustc-std-workspace-std-1.0 to
cargo-inputs.
 2020-01-16 19:36:26 +02:00
Efraim Flashner
a630e32ac1
gnu: rust-getopts-0.2: Don't hide package. 
* gnu/packages/crates-io.scm (rust-getopts-0.2)[arguments]: Skip build.
Add rust-log-0.3 to cargo-development-inputs.
[home-page]: Update home-page.
[properties]: Remove field.
 2020-01-16 19:36:26 +02:00
Efraim Flashner
efd8534897
gnu: Add rust-rustc-std-workspace-std-1.0. 
* gnu/packages/crates-io.scm (rust-rustc-std-workspace-std-1.0): New variable.
 2020-01-16 19:36:26 +02:00
Efraim Flashner
a075606f0d
gnu: rust-futures-0.1: Update to 0.1.29. 
* gnu/packages/crates-io.scm (rust-futures-0.1): Update to 0.1.29.
 2020-01-16 19:36:25 +02:00
Efraim Flashner
3f5e2fd956
gnu: rust-futures-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-futures-0.1)[arguments]: Skip build.
[home-page]: Update home-page.
[properties]: Remove field.
 2020-01-16 19:36:25 +02:00
Efraim Flashner
f320369117
gnu: rust-fuchsia-zircon-sys-0.3: Don't hide package. 
* gnu/packages/crates-io.scm (rust-fuchsia-zircon-sys-0.3)[arguments]:
Skip build.
[properties]: Remove field.
 2020-01-16 19:36:25 +02:00
Efraim Flashner
7b4d3d8698
gnu: rust-fuchsia-zircon-0.3: Don't hide package. 
* gnu/packages/crates-io.scm (rust-fuchsia-zircon-0.3)[arguments]: Skip
build. Add rust-bitflags-1, rust-fuchsia-zircon-sys-0.3 to cargo-inputs.
[properties]: Remove field.
 2020-01-16 19:36:25 +02:00
Efraim Flashner
7f27e979bf
gnu: rust-fuchsia-cprng-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-fuchsia-cprng-0.1)[arguments]: Skip
build.
[properties]: Remove field.
 2020-01-16 19:36:25 +02:00
Efraim Flashner
9eda3bcfdd
gnu: rust-fs-extra-1.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-fs-extra-1.1)[arguments]: Skip build.
[properties]: Remove field.
 2020-01-16 19:36:24 +02:00
Efraim Flashner
74de42eb66
gnu: rust-fnv-1.0: Don't hide package. 
* gnu/packages/crates-io.scm (rust-fnv-1.0)[arguments]: Skip build.
[synopsis]: Appease 'guix lint'.
[properties]: Remove field.
 2020-01-16 19:36:24 +02:00
Efraim Flashner
0c44bf848c
gnu: rust-fixedbitset-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-fixedbitset-0.1)[arguments]: Skip
build.
[properties]: Remove field.
 2020-01-16 19:36:24 +02:00
Efraim Flashner
ced2466617
gnu: rust-findshlibs-0.5: Don't hide package. 
* gnu/packages/crates-io.scm (rust-findshlibs-0.5)[arguments]: Skip
build. Add rust-lazy-static-1.3, rust-libc-0.2 to cargo-inputs.
[properties]: Remove field.
 2020-01-16 19:36:24 +02:00
Efraim Flashner
1c9d47b642
gnu: rust-filetime-0.2: Update to 0.2.8. 
* gnu/packages/crates-io.scm (rust-filetime-0.2): Update to 0.2.8.
[arguments]: Remove rust-tempdir-0.3 from cargo-development-inputs. Add
rust-tempfile-3.0.
 2020-01-16 19:36:24 +02:00
Efraim Flashner
ef8c91be7f
gnu: rust-filetime-0.2: Don't hide package. 
* gnu/packages/crates-io.scm (rust-filetime-0.2)[arguments]: Skip build.
Add rust-cfg-if-0.1, rust-libc-0.2, rust-redox-syscall-0.1,
rust-winapi-0.3 to cargo-inputs. Add rust-tempdir-0.3 to
cargo-development-inputs.
[properties]: Remove field.
 2020-01-16 19:36:23 +02:00
Efraim Flashner
0441e834a2
gnu: rust-fallible-iterator-0.2: Don't hide package. 
* gnu/packages/crates-io.scm (rust-fallible-iterator-0.2)[arguments]:
Skip build.
[properties]: Remove field.
 2020-01-16 19:36:23 +02:00
Efraim Flashner
a9b5fe4d86
gnu: rust-cmake-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-cmake-0.1)[arguments]: Skip build.
Add rust-cc-1.0 to cargo-inputs.
[properties]: Remove field.
 2020-01-16 19:36:23 +02:00
Efraim Flashner
dca4e6324c
gnu: rust-clicolors-control-1.0: Update to 1.0.1. 
* gnu/packages/crates-io.scm (rust-clicolors-control-1.0): Update to 1.0.1.
 2020-01-16 19:36:23 +02:00
Efraim Flashner
82c2f8840d
gnu: rust-clicolors-control-1.0: Don't hide package. 
* gnu/packages/crates-io.scm (rust-clicolors-control-1.0)[arguments]:
Skip build. Add rust-atty-0.2, rust-lazy-static-1.3, rust-libc-0.2,
rust-winapi-0.3 to cargo-inputs.
[properties]: Remove field.
 2020-01-16 19:36:20 +02:00
Ludovic Courtès
fb8a77f456
gnu: guile-syntax-highlight: Add "guile3.0-syntax-highlight" variant. 
* gnu/packages/guile-xyz.scm (guile-syntax-highlight)[source]: Add
'snippet' and 'modules'.
(guile3.0-syntax-highlight): New field.
 2020-01-16 18:30:57 +01:00
Ludovic Courtès
4f4086848b
gnu: guile-picture-language: Add "guile3.0-picture-language" variant. 
* gnu/packages/guile-xyz.scm (guile3.0-picture-language): New variable.
 2020-01-16 18:30:57 +01:00
Ludovic Courtès
e7921d5ecb
gnu: guile: Add 3.0.0. 
* gnu/packages/guile.scm (guile-3.0): New variable.
(guile-next): Turn into an alias for GUILE-3.0.
 2020-01-16 18:30:57 +01:00
Ludovic Courtès
47212fc763
records: Improve reporting of "invalid field specifier" errors. 
Previously users would just see:

  error: invalid field specifier

without source location or hints.

* guix/records.scm (expand): Add optional 'parent-form' parameter and
pass it to 'syntax-violation' when it is true.
(make-syntactic-constructor): Pass S as a third argument to
'report-invalid-field-specifier'.
* guix/ui.scm (report-load-error): For 'syntax-error', show SUBFORM or
FORM in the message.
* tests/records.scm ("define-record-type* & wrong field specifier"): Add
a 'subform' parameter and adjust test accordingly.
("define-record-type* & wrong field specifier, identifier"): New test.
* tests/guix-system.sh: Add test.
 2020-01-16 18:30:57 +01:00
Ludovic Courtès
84c5da08dd
guix package: Export 'transaction-upgrade-entry'. 
* guix/scripts/package.scm (transaction-upgrade-entry): Add 'store'
parameter and use it instead of (%store).  Export.
* tests/packages.scm ("transaction-upgrade-entry, zero upgrades")
("transaction-upgrade-entry, one upgrade")
("transaction-upgrade-entry, superseded package"): Adjust accordingly.
 2020-01-16 18:30:57 +01:00
Ludovic Courtès
4fe01b09ea
publish: Export 'signed-string'. 
* guix/scripts/publish.scm (signed-string): Export and improve docstring.
* tests/publish.scm ("/*.narinfo")
("/*.narinfo with properly encoded '+' sign"): Adjust accordingly.
 2020-01-16 18:30:57 +01:00
Nicolas Goaziou
a2548a3b5e
gnu: Update copyright header. 
* gnu/packages/python-xyz.scm: Update copyright header.
 2020-01-16 18:06:36 +01:00
Tobias Geerinckx-Rice
d7df48fad4
gnu: neomutt: Update to 20191207. 
* gnu/packages/mail.scm (neomutt): Update to 20191207.
 2020-01-16 17:32:35 +01:00
Tobias Geerinckx-Rice
a8fa39cd08
gnu: lmdb: Update to 0.9.24. 
* gnu/packages/databases.scm (lmdb): Update to 0.9.24.
 2020-01-16 17:32:35 +01:00
Nicolas Goaziou
1b4c5af29c
gnu: asymptote: Fix GUI. 
Fixes bug#39147.

* gnu/packages/plotutils.scm (asymptote)[inputs]: Add missing inputs.
[arguments]: Wrap GUI executable "xasy".
 2020-01-16 17:09:48 +01:00
Nicolas Goaziou
07c8177b88
gnu: Add python-cson. 
* gnu/packages/python-xyz.scm (python-cson): New variable.
 2020-01-16 17:09:48 +01:00
Nicolas Goaziou
602f3b6793
gnu: Add python-speg. 
* gnu/packages/python-xyz.scm (python-speg): New variable.
 2020-01-16 17:09:48 +01:00
zimoun
d14e4745b3
repl: Fix '--help' message. 
* guix/scripts/repl.scm: (show-help): Add '--listen' option message.
 2020-01-16 15:27:24 +01:00
zimoun
e8728862a1
repl: Add '--load-path' option. 
* guix/scripts/repl.scm (%option): Add '--load-path' option.
* doc/guix.texi: Document it.
 2020-01-16 15:27:24 +01:00
zimoun
3c8396b578
edit: Add '--load-path' option. 
* guix/scripts/edit.scm (%option): Add '--load-path' option.
* doc/guix.texi: Document it.
 2020-01-16 15:27:24 +01:00
zimoun
21f4fbdd84
refresh: Add '--load-path' option. 
* guix/scripts/refresh.scm (%option): Add '--load-path' option.
* doc/guix.texi: Document it.
 2020-01-16 15:27:24 +01:00
zimoun
2d4688c1ea
size: Add '--load-path' option. 
* guix/scripts/size.scm (%option): Add '--load-path' option.
* doc/guix.texi: Document it.
 2020-01-16 15:27:24 +01:00
Pierre Neidhardt
ee9a735bc8
graph: Add '--load-path' option. 
* guix/scripts/graph.scm (%option): Add '--load-path' option.
* doc/guix.texi: Document it.
* tests/guix-graph.sh: Test it.
 2020-01-16 15:27:20 +01:00
Christopher Baines
ba07842c34
gnu: cuirass: Update to 0.0.1-27.46f73b6. 
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-27.46f73b6.
 2020-01-16 08:42:59 +00:00
Ricardo Wurmus
d1ac643062
gnu: r-variancepartition: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.16.1.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
e8ccb98a08
gnu: r-flowworkspace: Update to 3.34.1. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 3.34.1.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
3f42bd81a5
gnu: r-ropls: Update to 1.18.6. 
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.6.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
516fa945b3
gnu: r-mlinterfaces: Update to 1.66.2. 
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.2.
[propagated-inputs]: Remove r-rda.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
ac9a9c374c
gnu: r-clusterprofiler: Update to 3.14.3. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.14.3.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
99e2a24978
gnu: r-inspect: Update to 1.16.2. 
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.2.
 2020-01-16 06:53:31 +01:00