Commit graph

114567 commits

Author SHA1 Message Date
Ricardo Wurmus
4dd9fdb68f
gnu: r-beclear: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-beclear): Update to 2.16.0.
2023-04-29 20:28:07 +02:00
Ricardo Wurmus
0d879deae1
gnu: r-megadepth: Update to 1.9.0.
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.9.0.
2023-04-29 20:28:07 +02:00
Ricardo Wurmus
c09a9bc427
gnu: r-ballgown: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.32.0.
2023-04-29 20:28:07 +02:00
Ricardo Wurmus
e5e7089db5
gnu: r-guitar: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.16.0.
2023-04-29 20:28:07 +02:00
Ricardo Wurmus
3616dd923f
gnu: r-chromstar: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.26.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
1b3be92024
gnu: r-snpstats: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.50.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
72288df46a
gnu: r-snapcgh: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-snapcgh): Update to 1.70.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
61432d53ff
gnu: r-pathview: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.40.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
ef6059cf27
gnu: r-ldblock: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.30.0.
[propagated-inputs]: Remove r-ensdb-hsapiens-v75, r-ensembldb, r-genomeinfodb,
r-genomicfiles, r-rsamtools, r-snpstats, and r-variantannotation; add
r-rlang.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
c00d4a394d
gnu: r-kegggraph: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.60.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
70514e0281
gnu: r-gwascat: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.32.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
e8a52e54f7
gnu: r-gviz: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.44.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
311339801e
gnu: r-ggbio: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.48.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
764220f848
gnu: r-erma: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-erma): Update to 1.16.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
bc7db31ceb
gnu: r-catalyst: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.24.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
d1e16723dd
gnu: r-msmstests: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.38.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
0d854ac754
gnu: r-msmseda: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.38.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
bca0afda01
gnu: r-biocio: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.10.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
6459537f90
gnu: r-msfeatures: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-msfeatures): Update to 1.8.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
f4c4bc5473
gnu: r-mscoreutils: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.12.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
643e63ef61
gnu: r-delayedmatrixstats: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.22.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
4b4df8d533
gnu: r-sparsematrixstats: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.12.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
1435a289dd
gnu: r-scran: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-scran): Update to 1.28.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
c3056799b3
gnu: r-scater: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.28.0.
[propagated-inputs]: Remove r-gridextra; add r-densvis.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
febe8360c3
gnu: r-scuttle: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.10.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
8dc03857a6
gnu: r-singler: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-singler): Update to 2.2.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
b0a6411b85
gnu: r-singlecellexperiment: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.22.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
09ada1eb1e
gnu: r-chromvar: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.22.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
0609a92c0b
gnu: r-motifmatchr: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.22.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
6263d39069
gnu: r-maftools: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-maftools): Update to 2.16.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
99c001303d
gnu: r-tfbstools: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.38.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
5ab3d66ffc
gnu: r-cner: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-cner): Update to 1.36.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
b9b6c29a75
gnu: r-beadarraysnp: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-beadarraysnp): Update to 1.66.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
e76467b72c
gnu: r-beachmat: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.16.0.
2023-04-29 20:28:06 +02:00
Ricardo Wurmus
f482bb1256
gnu: r-rhdf5lib: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.22.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
582dac2949
gnu: r-hdf5array: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.28.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
143b70c92b
gnu: r-hitc: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.44.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
765b41564a
gnu: r-fithic: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.26.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
8866d47bce
gnu: r-fishpond: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-fishpond): Update to 2.6.0.
[inputs]: Remove zlib.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
85bc989a66
gnu: r-rgraphviz: Update to 2.44.0.
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.44.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
2e81140c18
gnu: r-s4vectors: Update to 0.38.0.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.38.0.
[native-inputs]: Add r-knitr.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
ed6d919ef0
gnu: r-preprocesscore: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.62.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
ae8956bbc8
gnu: r-icens: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-icens): Update to 1.72.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
ebd0bdd84c
gnu: r-m3c: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.22.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
aff09ecb05
gnu: r-rgreat: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 2.2.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
bd1b41e8d1
gnu: r-pcatools: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.12.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
f2ce4a037f
gnu: r-biodist: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.72.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
2f1c5f361f
gnu: r-biocworkflowtools: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.26.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
37de521f22
gnu: r-biocset: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.14.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus
72ba2d8f48
gnu: r-biocpkgtools: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.18.0.
2023-04-29 20:28:05 +02:00