Commit graph

127085 commits

Author SHA1 Message Date
Ricardo Wurmus
3f815da53c
gnu: r-dama: Update to 1.74.0.
* gnu/packages/bioconductor.scm (r-dama): Update to 1.74.0.

Change-Id: Ieda9ccaf4b4d7fda967170ad9771e65388303f2c
2023-11-03 22:49:13 +01:00
Ricardo Wurmus
8d8f9903b1
gnu: r-cummerbund: Update to 2.44.0.
* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.44.0.

Change-Id: I3417397cbcd463c817299ee2d37343f8933ff8b5
2023-11-03 22:49:13 +01:00
Ricardo Wurmus
352f4079d3
gnu: r-coverageview: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.40.0.

Change-Id: Idb6c881d5a7804984577217908062cc37ad3d2b1
2023-11-03 22:49:13 +01:00
Ricardo Wurmus
09a6c19465
gnu: r-coregx: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-coregx): Update to 2.6.0.

Change-Id: I80acbeb9a1850d3c7a374a71898a04654b5ebd2d
2023-11-03 22:49:13 +01:00
Ricardo Wurmus
570177be67
gnu: r-cellid: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-cellid): Update to 1.10.0.
[propagated-inputs]: Add r-scater.
[native-inputs]: Remove r-scater.

Change-Id: I7be617a312fb009c6986e947e21b6cfd862db873
2023-11-03 22:49:13 +01:00
Ricardo Wurmus
59798d25e2
gnu: r-cardelino: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-cardelino): Update to 1.4.0.

Change-Id: I3f06c5b266bd6d4ae09da8ebb91743cb57468746
2023-11-03 22:49:13 +01:00
Ricardo Wurmus
c2460ad512
gnu: r-breakpointr: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-breakpointr): Update to 1.20.0.

Change-Id: I1598b330dbcf5b78ba9fc7623892870d1899233c
2023-11-03 22:49:13 +01:00
Ricardo Wurmus
44765e6f2c
gnu: r-biocgenerics: Update to 0.48.1.
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.48.1.

Change-Id: Ia2721e9ecbc2f4649962c4b4b5297616fbb5b169
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
278a436a00
gnu: r-biocversion: Update to 3.18.0.
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.18.0.

Change-Id: Ic343f3a797330ae85ce86166805189d5738107f2
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
268cf54fbf
gnu: r-barcodetrackr: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-barcodetrackr): Update to 1.10.0.

Change-Id: Ia3ad0d4069441dd9a0b6a93f26e4791eae3ab408
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
fed0d240b5
gnu: r-banocc: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-banocc): Update to 1.26.0.

Change-Id: I4f20020f49a3eeba9b97a1154b7772ee5232cb82
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
70f14dd31e
gnu: r-bandits: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-bandits): Update to 1.18.0.

Change-Id: Iafbafd9f7275b9936fa73d47f0b47a1a4ec6ea7a
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
7bd373b25e
gnu: r-bambu: Update to 3.4.0.
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.4.0.

Change-Id: I14837124a4a081c29e696ad47e27aaf9d62127b1
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
caa56d8e98
gnu: r-badregionfinder: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-badregionfinder): Update to 1.30.0.

Change-Id: I24f656ea77622211c04a4c09a7bb541159680b8a
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
e777951d2b
gnu: r-bader: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-bader): Update to 1.40.0.

Change-Id: I4aff6ebbbdfba705b97c0cf8b7a1166f855bafe6
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
3eb6468e63
gnu: r-basespacer: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-basespacer): Update to 1.46.0.

Change-Id: I22960b809658603aec589daa7c85acc960727bd4
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
f93200960b
gnu: r-baalchip: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-baalchip): Update to 1.28.0.

Change-Id: Ice6916945c94202938b763e4cbabac35385375fd
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
319d9c6cd3
gnu: r-awst: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-awst): Update to 1.10.0.

Change-Id: I077dabb772d8a9c547e6ac23622b78c3c319f3cc
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
35fe2b495d
gnu: r-awfisher: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-awfisher): Update to 1.16.0.

Change-Id: I08e4f96c8db4758aa0ef04a46fdd715bfcd76fd7
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
601f91b94d
gnu: r-attract: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-attract): Update to 1.54.0.

Change-Id: Ie8cfd6d7c45b6a92bc2c4789e7b2d088da470118
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
e1487a6e2a
gnu: r-atsnp: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-atsnp): Update to 1.18.0.

Change-Id: Ic703de99af48a7b95142b2fdfdf01a32490acf5e
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
74d22e52ce
gnu: r-atena: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-atena): Update to 1.8.0.

Change-Id: I99ef991a397053999dc4216189a76caf34e1b6c5
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
46b96b9383
gnu: r-asset: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-asset): Update to 2.20.0.

Change-Id: If9a92e17b7a5c7328d6352140bdd8732d4c2a78c
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
42dea0bd0a
gnu: r-assessorf: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-assessorf): Update to 1.20.0.

Change-Id: I4beb9578807bc9cb433606c06f5505bc180770f7
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
2688eb505d
gnu: r-aspli: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-aspli): Update to 2.12.0.

Change-Id: I717b99ed6a348749b2549f2386f793b11106d0e2
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
fa5b2b5dbc
gnu: r-asics: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-asics): Update to 2.18.0.

Change-Id: Id9be760027609e1aa5729969e24e97b34f3141d9
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
9209b772b5
gnu: r-asgsca: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-asgsca): Update to 1.36.0.

Change-Id: I0bcb7970cf29513a7551134c9b425cda337320ed
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
67db607930
gnu: r-aseb: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-aseb): Update to 1.46.0.

Change-Id: I375a4de7c9836fbf851ca033e7ab4ce25cb857a0
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
dc87880cb2
gnu: r-asafe: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-asafe): Update to 1.28.0.

Change-Id: If9d94cbb09fb2872fdf5224df95495666c2820c9
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
fc79ff45b1
gnu: r-arrayquality: Update to 1.80.0.
* gnu/packages/bioconductor.scm (r-arrayquality): Update to 1.80.0.

Change-Id: I0ef5275399cc423785dfbb30b00ee5148f18906e
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
f1b4c1eaec
gnu: r-arraymvout: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-arraymvout): Update to 1.60.0.

Change-Id: I42b04c02fd24de6898c6be7c18abeeb534737860
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
637217271f
gnu: r-arrayqualitymetrics: Update to 3.58.0.
* gnu/packages/bioconductor.scm (r-arrayqualitymetrics): Update to 3.58.0.

Change-Id: I5ee044a089e154f13250890ef09f06c481598296
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
e79d0a54b5
gnu: r-arrayexpress: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-arrayexpress): Update to 1.62.0.

Change-Id: I4d96c4ea89cd51426b0405d26818062751c43d71
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
4b6dfa6785
gnu: r-antiprofiles: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-antiprofiles): Update to 1.42.0.

Change-Id: Iee706af570ae789b897f4cfb0a53a474f8615d12
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
79d50ddc44
gnu: r-annmap: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-annmap): Update to 1.44.0.

Change-Id: Id960993131170a85231f5b21b354d67b5466ed99
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
f625fab931
gnu: r-aneufinder: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-aneufinder): Update to 1.30.0.

Change-Id: Ib57882838b947c014b2fad4c8c829d91c7aa6a17
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
d79c200c1e
gnu: r-altcdfenvs: Update to 2.64.0.
* gnu/packages/bioconductor.scm (r-altcdfenvs): Update to 2.64.0.

Change-Id: I10775d097dfce34d8b3d2846971a4318368a871f
2023-11-03 22:49:12 +01:00
Ricardo Wurmus
00dabe4d4f
gnu: r-alpsnmr: Update to 4.4.0.
* gnu/packages/bioconductor.scm (r-alpsnmr): Update to 4.4.0.

Change-Id: If005837c237e26e32dda5c69a4bfdc9c20d7a0b1
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
5441a7cd9e
gnu: r-alphabeta: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-alphabeta): Update to 1.16.0.

Change-Id: I6abd11e9a22d73737975c660e565944aead7e14b
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
dc6a5a7045
gnu: r-alevinqc: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.18.0.

Change-Id: I96c53e6ac99d375da3a87cdc3ffad888f82bbb80
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
99a2acb5ab
gnu: r-aldex2: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-aldex2): Update to 1.34.0.
[propagated-inputs]: Add r-directlabels, r-lattice, and r-latticeextra.

Change-Id: Ibd4295392b188034231f54d129af02318510932e
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
e2c41d2c65
gnu: r-anvil: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.14.0.

Change-Id: I154aa331580809b550f33a13cfcebecbcc165820
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
4226d5138b
gnu: r-annotationhubdata: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-annotationhubdata): Update to 1.32.0.

Change-Id: Ic55ce4dbad0dd504760a40ef1ac4386318b262cd
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
25da6c744e
gnu: r-ancombc: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.4.0.

Change-Id: Idccde9e571c9ee7b0014bbe4f7328e5b37d764d9
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
4771d5687c
gnu: r-anaquin: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-anaquin): Update to 2.26.0.

Change-Id: I74a39d84856646bcbe0bbc9006c92095145017be
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
578489abe5
gnu: r-amaretto: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-amaretto): Update to 1.18.0.

Change-Id: I007bd666a0344d206b418d0c45a816518c5dc65c
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
84e9f46720
gnu: r-amplican: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-amplican): Update to 1.24.0.

Change-Id: Ifc0a8d5d2a98a4025ba85759bce75a452275f065
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
6f7723c3ce
gnu: r-amountain: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-amountain): Update to 1.28.0.

Change-Id: If5cdf59afc38a70335b682b0687b63f33db77a63
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
4658cffbfd
gnu: r-airpart: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-airpart): Update to 1.10.0.

Change-Id: Iafee8663fb558b5d73f662a4ea1fb0a1999e109e
2023-11-03 22:49:11 +01:00
Ricardo Wurmus
77d2e3167d
gnu: r-aims: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-aims): Update to 1.34.0.

Change-Id: I494a799b261fedc20204837edbd9017e540de81f
2023-11-03 22:49:11 +01:00