Commit graph

39355 commits

Author SHA1 Message Date
Marius Bakke
f62b57ba74
gnu: re2: Update to 2019-07-01.
* gnu/packages/regex.scm (re2): Update to 2019-07-01.
2019-07-02 17:18:54 +02:00
Marius Bakke
e307f52e01
gnu: postgresql@10: Update to 10.9.
* gnu/packages/databases.scm (postgresql): Update to 10.9.
2019-07-02 17:14:34 +02:00
Marius Bakke
0323db5aef
gnu: tzdata: Update to 2019b.
* gnu/packages/base.scm (tzdata): Update to 2019b.
2019-07-02 17:11:39 +02:00
Rutger Helling
35a16f5f6d
gnu: btrfs-progs: Update to 5.1.1.
* gnu/packages/linux.scm (btrfs-progs): Update to 5.1.1.
2019-07-02 15:52:04 +02:00
Marius Bakke
af65e4c289
gnu: ImageMagick: Update to 6.9.10-51.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.10-51.
2019-07-02 14:49:47 +02:00
Marius Bakke
6dc7a19342
gnu: python-mako: Update to 1.0.13.
* gnu/packages/python-xyz.scm (python-mako): Update to 1.0.13.
2019-07-02 14:48:04 +02:00
Marius Bakke
c6c0940ea3
gnu: python-pycparser: Update to 2.19.
* gnu/packages/python-xyz.scm (python-pycparser): Update to 2.19.
[arguments]: End phases on #t.
2019-07-02 14:38:23 +02:00
Marius Bakke
4c1cfe0faf
gnu: perl-module-build: Update to 0.4229.
* gnu/packages/perl.scm (perl-module-build): Update to 0.4229.
2019-07-02 14:21:36 +02:00
Efraim Flashner
697df13f61
gnu: octave-cli: Sort inputs alphabetically.
* gnu/packages/maths.scm (octave-cli)[inputs]: Sort inputs alphabetically.
2019-07-02 15:04:56 +03:00
Efraim Flashner
4bac5bba51
gnu: Wrap program with libraries.
* gnu/packages/package-management.scm (stow)[arguments]: Add custom
'wrap-stow phase to wrap stow with necessary inputs.
[propagated-inputs]: Move perl-clone, perl-clone-choose, perl-hash-merge
to...
[inputs]: ... here.
2019-07-02 11:43:04 +03:00
Amar Singh
71a2927705
gnu: emacs-shroud: Update to 1.83.4.
* gnu/packages/emacs-xyz.scm (emacs-shroud): Update to 1.83.4.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-07-02 10:39:36 +03:00
Rutger Helling
941ae98eae
gnu: faudio: Update to 19.07.
* gnu/packages/audio.scm (faudio): Update to 19.07.
2019-07-02 09:36:50 +02:00
Jan Nieuwenhuizen
48eb71aea8
gnu: emacsy: Update to 0.4.1.
* gnu/packages/guile-xyz.scm (emacsy): Update to 0.4.1.
2019-07-02 07:59:15 +02:00
Marius Bakke
27b3568b61
gnu: tzdata: Update source URI.
* gnu/packages/base.scm (tzdata, tzdata-for-tests)[source, native-inputs]:
Update redirected URIs.
2019-07-02 01:57:13 +02:00
Nicolas Goaziou
0f0651295e
gnu: silkaj: Update to 0.7.2.
* gnu/packages/finance.scm (silkaj): Update to 0.7.2.
2019-07-02 00:45:05 +02:00
Nicolas Goaziou
7242d5792b
gnu: giac: Update to 1.5.0-61.
* gnu/packages/algebra.scm (giac): Update to 1.5.0-61.
2019-07-02 00:38:36 +02:00
Nicolas Goaziou
2868804de6
gnu: python-duniterpy: Update to 0.54.3.
* gnu/packages/finance.scm (python-duniterpy): Update to 0.54.3.
2019-07-02 00:13:08 +02:00
Ludovic Courtès
78c88baad5
gnu: guile: Add 2.2.6.
* gnu/packages/guile.scm (guile-2.2.5): Rename to...
(guile-2.2.6): ... this, and update to 2.2.6.
2019-07-01 12:29:34 +02:00
Danny Milosavljevic
037bef7db4
gnu: behave: Fix build.
* gnu/packages/check.scm (behave)[propagated-inputs]: Add
python-importlib-metadata.
2019-07-01 12:08:08 +02:00
Marius Bakke
a3d1a3487a
gnu: gtksourceviewmm: Build against gtksourceview@3.
* gnu/packages/gtk.scm (gtksourceviewmm)[propagated-inputs]: Change
GTKSOURCEVIEW to GTKSOURCEVIEW-3.
2019-06-30 20:14:58 +02:00
Marius Bakke
5dd0269244
gnu: miniupnpc: Update to 2.1.20190625.
* gnu/packages/upnp.scm (miniupnpc): Update to 2.1.20190625.
2019-06-30 14:11:02 +02:00
Marius Bakke
1307aa4427
gnu: mbedtls-apache: Update to 2.16.2.
* gnu/packages/tls.scm (mbedtls-apache): Update to 2.16.2.
2019-06-30 14:11:01 +02:00
Marius Bakke
ff68ddb032
gnu: ungoogled-chromium: Build against ICU 64.
* gnu/packages/icu4c.scm (icu4c-64): New public variable.
* gnu/packages/chromium.scm (ungoogled-chromium)[inputs]: Change ICU4C to ICU4C-64.
2019-06-30 14:11:00 +02:00
Marius Bakke
d1b93e91a4
gnu: python-cython: Update to 0.29.11.
* gnu/packages/python-xyz.scm (python-cython): Update to 0.29.11.
2019-06-30 13:41:53 +02:00
Marius Bakke
730c1cc04e
gnu: ImageMagick: Update to 6.9.10-50.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.10-50.
2019-06-30 13:41:21 +02:00
Marius Bakke
c50f15d67f
gnu: perl-net-ssleay: Update source URI.
This is a follow-up to commit 966e4beadc.

* gnu/packages/tls.scm (perl-net-ssleay)[source](uri): Update to current.
2019-06-30 12:45:52 +02:00
Marius Bakke
966e4beadc
gnu: perl-net-ssleay: Update to 1.88.
* gnu/packages/tls.scm (perl-net-ssleay): Update to 1.88.
2019-06-29 23:30:19 +02:00
Marius Bakke
5e26ac3f6a
gnu: gtk+: Update to 3.24.9.
* gnu/packages/gtk.scm (gtk+): Update to 3.24.9.
2019-06-29 23:30:19 +02:00
Marius Bakke
8cf7afe69d
gnu: libinput: Update to 1.13.4.
* gnu/packages/freedesktop.scm (libinput): Update to 1.13.4.
2019-06-29 23:30:19 +02:00
Marius Bakke
c2dad3f983
gnu: nss, nss-certs: Update to 3.44.1.
* gnu/packages/certs.scm (nss-certs): Update to 3.44.1.
* gnu/packages/nss.scm (nss): Likewise.
2019-06-29 23:30:18 +02:00
Marius Bakke
93ef8ca662
gnu: mesa: Do not pass an empty string argument to the build system.
This is a follow-up to commit 301b2e74f9.

* gnu/packages/gl.scm (mesa)[arguments]: Return the empty list instead of an
empty string for the non-matching case.
2019-06-29 23:30:18 +02:00
Marius Bakke
6e1f8d552b
Merge branch 'master' into staging 2019-06-29 23:23:59 +02:00
Marius Bakke
8e92d5465f
gnu: nginx: Update to 1.17.1.
* gnu/packages/web.scm (nginx): Update to 1.17.1.
2019-06-29 23:17:13 +02:00
Marius Bakke
55d1d9eb2f
gnu: gstreamer: Fix buffer offset problem.
* gnu/packages/patches/gstreamer-buffer-reset-offset.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gstreamer.scm (gstreamer)[source](patches): New field.
[arguments]: Do not disable any tests.
2019-06-29 23:17:13 +02:00
Efraim Flashner
bdb51ed6d1
gnu: stow: Update license information.
* gnu/packages/package-management.scm (stow)[license]: Update to gpl3+.
2019-06-29 21:18:50 +03:00
Tobias Geerinckx-Rice
3a8bfebed9
etc: Remove hydra.gnu.org.pub key.
* etc/substitutes/hydra.gnu.org.pub: Delete file.
* guix/self.scm (miscellaneous-files): Don't install it.
* Makefile.am (dist_pkgdata_DATA): Remove it.
* gnu/services/base.scm (%default-authorized-guix-keys): Likewise.
(hydra-key-authorization): Rename to…
(substitute-key-authorization): …this.  Adjust only call site.
2019-06-29 14:27:22 +02:00
Tobias Geerinckx-Rice
a3efe269b5
gnu: flashrom: Update to 1.1.
* gnu/packages/flashing-tools.scm (flashrom): Update to 1.1.
2019-06-29 06:28:50 +02:00
Tobias Geerinckx-Rice
ad9baf38ce
gnu: di: Update to 4.47.1.
* gnu/packages/admin.scm (di): Update to 4.47.1.
2019-06-29 06:28:50 +02:00
Eric Bavier
30833b1397
gnu: stow: Update to 2.3.0.
* gnu/packages/package-management.scm (stow): Update to 2.3.0.
[propagated-inputs]: New field.
2019-06-28 22:49:21 -05:00
Eric Bavier
d1555f34c0
gnu: Add Perl Clone::Choose.
* gnu/packages/perl.scm (perl-clone-choose): New variable.
2019-06-28 22:44:59 -05:00
Ivan Petkov
f5de2b9a3e
gnu: rust: use llvm@8
* gnu/packages/llvm.scm (llvm): Rename to...
(llvm-8): ...this.
(llvm): New variable.
* gnu/packages/rust.scm (rust)[inputs]: Use llvm-8
2019-06-28 18:31:51 -07:00
Ivan Petkov
f676b2a45f
gnu: rust: downgrade older versions to llvm@6
* gnu/packages/rust.scm: (rust-1.30): Remove llvm override.
2019-06-28 18:31:51 -07:00
Ivan Petkov
f309420b2d
gnu: rust: remove debug-info patch thanks to newer gdb version
* gnu/local.mk: (dist_patch_DATA): Delete
%D%/packages/patches/rust-1.30-gdb-llvm.patch
* gnu/packages/rust.scm: (rust-1.30): Delete patch overrides.
(rust-1.31): Delete patch overrides.
2019-06-28 18:31:47 -07:00
Ricardo Wurmus
3d0c9ff83e
gnu: r-quantreg: Update to 5.41.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.41.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus
73a29d39b3
gnu: r-fpc: Update to 2.2-3.
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-3.
[propagated-inputs]: Remove r-mvtnorm.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus
666a5a649c
gnu: r-mclust: Update to 5.4.4.
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.4.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus
fad641716e
gnu: r-mvtnorm: Update to 1.0-11.
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-11.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus
30f7acdb6b
gnu: r-segmented: Update to 1.0-0.
* gnu/packages/statistics.scm (r-segmented): Update to 1.0-0.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus
5eddf1e291
gnu: r-plotrix: Update to 3.7-6.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-6.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus
0b17f1d1dd
gnu: r-dbplyr: Update to 1.4.2.
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.2.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus
ef558bcfc5
gnu: r-rlang: Update to 0.4.0.
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.0.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus
45ad3fa9e1
gnu: r-gdtools: Update to 0.1.9.
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.9.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus
2c4b38002e
gnu: r-cluster: Update to 2.1.0.
* gnu/packages/statistics.scm (r-cluster): Update to 2.1.0.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
d42fb7d293
gnu: r-future-apply: Update to 1.3.0.
* gnu/packages/cran.scm (r-future-apply): Update to 1.3.0.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
36ff60f539
gnu: r-bootstrap: Update to 2019.6.
* gnu/packages/cran.scm (r-bootstrap): Update to 2019.6.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
93e72161ae
gnu: r-rnifti: Update to 0.11.0.
* gnu/packages/cran.scm (r-rnifti): Update to 0.11.0.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
9f84c9e843
gnu: r-rgl: Update to 0.100.24.
* gnu/packages/cran.scm (r-rgl): Update to 0.100.24.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
da4754a3b1
gnu: r-remotes: Update to 2.1.0.
* gnu/packages/cran.scm (r-remotes): Update to 2.1.0.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
a634a76a06
gnu: r-bayestestr: Update to 0.2.2.
* gnu/packages/cran.scm (r-bayestestr): Update to 0.2.2.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
992e03d209
gnu: r-emmeans: Update to 1.3.5.1.
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.5.1.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
56ab7acb96
gnu: r-ggstance: Update to 0.3.2.
* gnu/packages/cran.scm (r-ggstance): Update to 0.3.2.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
c46a16407b
gnu: r-flextable: Update to 0.5.5.
* gnu/packages/cran.scm (r-flextable): Update to 0.5.5.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
36c5f86fab
gnu: r-sjmisc: Update to 2.8.1.
* gnu/packages/cran.scm (r-sjmisc): Update to 2.8.1.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
c3447a92ee
gnu: r-prediction: Update to 0.3.14.
* gnu/packages/cran.scm (r-prediction): Update to 0.3.14.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
0d2e266220
gnu: r-officer: Update to 0.3.5.
* gnu/packages/cran.scm (r-officer): Update to 0.3.5.
2019-06-29 01:34:44 +02:00
Ricardo Wurmus
0ccb34584c
gnu: r-ggpubr: Update to 0.2.1.
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.1.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
a4bc73b236
gnu: r-ellipsis: Update to 0.2.0.
* gnu/packages/cran.scm (r-ellipsis): Update to 0.2.0.
[propagated-inputs]: Add r-rlang.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
dacf52e0a3
gnu: r-cgdsr: Update to 1.3.0.
* gnu/packages/cran.scm (r-cgdsr): Update to 1.3.0.
[propagated-inputs]: Add r-httr.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
22b2d8b97f
gnu: r-quantmod: Update to 0.4-15.
* gnu/packages/cran.scm (r-quantmod): Update to 0.4-15.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
f5ec882390
gnu: r-tinytex: Update to 0.14.
* gnu/packages/cran.scm (r-tinytex): Update to 0.14.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
db794146ac
gnu: r-xfun: Update to 0.8.
* gnu/packages/cran.scm (r-xfun): Update to 0.8.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
1f7e8d49c3
gnu: r-performanceanalytics: Update to 1.5.3.
* gnu/packages/cran.scm (r-performanceanalytics): Update to 1.5.3.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
4ae5f18a25
gnu: r-abbyyr: Update to 0.5.5.
* gnu/packages/cran.scm (r-abbyyr): Update to 0.5.5.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
5b86bcfa68
gnu: r-phangorn: Update to 2.5.5.
* gnu/packages/bioinformatics.scm (r-phangorn): Update to 2.5.5.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
7f17e60ab7
gnu: r-tximport: Update to 1.12.3.
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.12.3.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
dafd290d21
gnu: r-genomicfeatures: Update to 1.36.3.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.3.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
c40bba2b36
gnu: r-genomicalignments: Update to 1.20.1.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.20.1.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
888085c36c
gnu: r-biomart: Update to 2.40.1.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.1.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
f0c244229a
gnu: r-edger: Update to 3.26.5.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.5.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus
0253b5d881
gnu: r-systempiper: Update to 1.18.2.
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.18.2.
2019-06-29 01:34:42 +02:00
Ricardo Wurmus
3e265d968b
gnu: r-rsubread: Update to 1.34.4.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.4.
2019-06-29 01:34:42 +02:00
Ricardo Wurmus
3c944fdace
gnu: r-genomicscores: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 1.8.1.
2019-06-29 01:34:42 +02:00
Ricardo Wurmus
aff3ecbfda
gnu: r-dose: Update to 3.10.2.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.2.
2019-06-29 01:34:42 +02:00
Marius Bakke
4289d1d71c
gnu: python-llvmlite: Build against LLVM 7.
This is a follow-up to commit c5296e205b.

* gnu/packages/llvm.scm (llvm-7, clang-runtime-7, clang-7): New public variables.
(python-llvmlite)[inputs]: Inherit from LLVM-7 instead of LLVM.
2019-06-28 20:53:20 +02:00
Jakob L. Kreuze
4ee2cce327
gnu: Add beets-bandcamp.
* gnu/packages/music.scm (beets-bandcamp): New variable.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2019-06-28 14:22:05 +02:00
Nicolas Goaziou
9d83e60e51
gnu: musescore: Update to 3.2.
* gnu/packages/music.scm (musescore): Update to 3.2.
2019-06-28 10:46:45 +02:00
Nicolas Goaziou
458f410bc2
gnu: snap: Update to 5.
* gnu/packages/education.scm (snap): Update to 5.
2019-06-28 10:11:12 +02:00
Efraim Flashner
5b786db86c
gnu: atlas: All phases return #t.
* gnu/packages/maths.scm (atlas)[arguments]: Ensure all custom phases
return #t.
2019-06-28 10:39:11 +03:00
Nicolas Goaziou
2668e06efd
gnu: krita: Update to 4.2.2.
* gnu/packages/kde.scm (krita): Update to 4.2.2.
[source]: Don't use NAME in source URI.
[arguments]: Remove obsolete configure flags.
[native-inputs]: Add pkg-config.
[inputs]: Add quazip, reorder alphabetically.
2019-06-28 09:34:25 +02:00
Nicolas Goaziou
09debcf5aa
gnu: Add quazip.
* gnu/packages/compression.scm (quazip): New variable.
2019-06-28 09:34:25 +02:00
Mark H Weaver
fbb5b688b6
gnu: linux-libre@4.14: Update to 4.14.131.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.131.
(%linux-libre-4.14-hash): Update hash.
2019-06-27 18:58:45 -04:00
Mark H Weaver
1ad3e3f9f1
gnu: linux-libre@4.9: Update to 4.9.184.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.184.
2019-06-27 18:58:06 -04:00
Mark H Weaver
9969b436af
gnu: linux-libre@4.4: Update to 4.4.184.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.184.
2019-06-27 18:57:10 -04:00
Ricardo Wurmus
bae0f8af21
gnu: pigx-scrnaseq: Update to 0.0.8.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 0.0.8.
2019-06-27 23:23:29 +02:00
Rutger Helling
6ad087b821
gnu: mame: Update to 0.211.
* gnu/packages/emulators.scm (mame): Update to 0.211.
2019-06-27 13:28:33 +02:00
Ludovic Courtès
066eeae1a1
packages: 'specification->package+output' distinguishes "no output specified".
Until now the caller couldn't tell the different between a spec like
"foo:out" and one like "foo".  This change allows users to distinguish
between these two cases.

* gnu/packages.scm (specification->package+output): Disable output
membership test when OUTPUT = #f and SUB-DRV = #f.
* tests/packages.scm ("specification->package+output")
("specification->package+output invalid output")
("specification->package+output no default output")
("specification->package+output invalid output, no default"): New tests.
2019-06-27 11:14:41 +02:00
Ludovic Courtès
c25b44d640
accounts: Use 'fsync' instead of 'fdatasync'.
* gnu/build/accounts.scm (catch-ENOSYS): Remove.
(database-writer): Use 'fsync' instead of 'fdatasync'.
2019-06-27 11:14:40 +02:00
Rutger Helling
b09e4960be
gnu: dosbox: Update to 0.74-3.
* gnu/packages/emulators.scm (dosbox): Update to 0.74-3.
2019-06-27 10:24:11 +02:00
Arun Isaac
4ffed73419
gnu: rep-gtk: Update to 0.90.8.3.
* gnu/packages/sawfish.scm (rep-gtk): Update to 0.90.8.3.
[source]: Use HTTPS URI.
[arguments]: Add remove-autogen phase.
[native-inputs]: Add autoconf, automake and libtool.
[home-page]: Update URI.
2019-06-27 12:22:04 +05:30
Benjamin Slade
edccf761e3
gnu: sawfish: Update to 1.12.0.
* gnu/packages/sawfish.scm (sawfish): Update to 1.12.0.
[source]: Use HTTPS URI.
[home-page]: Update URI.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2019-06-27 12:21:09 +05:30